RNA–Protein interactions for RNA: ENST00000413374.1

NCKIPSD-202, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 3

Gene NCKIPSD, Length 725 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-202ENST00000413374 ALDH6A1Q02252 535 aaKnown RBP9.48□□□□□ -0.89
NCKIPSD-202ENST00000413374 ELAVL1Q15717 326 aaKnown RBP9.48□□□□□ -0.89
NCKIPSD-202ENST00000413374 CYP20A1Q6UW02 462 aa9.48□□□□□ -0.89
NCKIPSD-202ENST00000413374 TIFABQ6ZNK6 161 aa9.48□□□□□ -0.89
NCKIPSD-202ENST00000413374 DGAT2L6Q6ZPD8 337 aa9.48□□□□□ -0.89
NCKIPSD-202ENST00000413374 FJX1Q86VR8 437 aa9.48□□□□□ -0.89
NCKIPSD-202ENST00000413374 ZNF227Q86WZ6 799 aa9.48□□□□□ -0.89
NCKIPSD-202ENST00000413374 TMEM156Q8N614 296 aa9.48□□□□□ -0.89
NCKIPSD-202ENST00000413374 HORMAD2Q8N7B1 307 aa9.48□□□□□ -0.89
NCKIPSD-202ENST00000413374 DNAJB8Q8NHS0 232 aa9.48□□□□□ -0.89
NCKIPSD-202ENST00000413374 UBLCP1Q8WVY7 318 aaPredicted RBP9.48□□□□□ -0.89
NCKIPSD-202ENST00000413374 VMP1Q96GC9 406 aa9.48□□□□□ -0.89
NCKIPSD-202ENST00000413374 SCMH1Q96GD3 660 aa9.48□□□□□ -0.89
NCKIPSD-202ENST00000413374 DGAT2Q96PD7 388 aa9.48□□□□□ -0.89
NCKIPSD-202ENST00000413374 TXLNGYQ9BZA5 131 aa9.48□□□□□ -0.89
NCKIPSD-202ENST00000413374 EPB41L4BQ9H329 900 aa9.48□□□□□ -0.89
NCKIPSD-202ENST00000413374 RPF2Q9H7B2 306 aaKnown RBP9.48□□□□□ -0.89
NCKIPSD-202ENST00000413374 ADAP2Q9NPF8 381 aa9.48□□□□□ -0.89
NCKIPSD-202ENST00000413374 PLEKHB1Q9UF11 243 aaPredicted RBP9.48□□□□□ -0.89
NCKIPSD-202ENST00000413374 NPIPA1Q9UND3 350 aa9.48□□□□□ -0.89
NCKIPSD-202ENST00000413374 NBASA2RRP1 2371 aa9.48□□□□□ -0.89
NCKIPSD-202ENST00000413374 IQANK1A0A1B0GTG1 560 aa9.47□□□□□ -0.89
NCKIPSD-202ENST00000413374 A0A1W2PR48 441 aa9.47□□□□□ -0.89
NCKIPSD-202ENST00000413374 TMEM200CA6NKL6 621 aa9.47□□□□□ -0.89
NCKIPSD-202ENST00000413374 HRKO00198 91 aa9.47□□□□□ -0.89
NCKIPSD-202ENST00000413374 PGRMC2O15173 223 aa9.47□□□□□ -0.89
NCKIPSD-202ENST00000413374 PROM1O43490 865 aa9.47□□□□□ -0.89
NCKIPSD-202ENST00000413374 DLX3O60479 287 aa9.47□□□□□ -0.89
NCKIPSD-202ENST00000413374 UGDHO60701 494 aa9.47□□□□□ -0.89
NCKIPSD-202ENST00000413374 SLC25A12O75746 678 aa9.47□□□□□ -0.89
NCKIPSD-202ENST00000413374 OR2J2O76002 312 aa9.47□□□□□ -0.89
NCKIPSD-202ENST00000413374 SUPT7LO94864 414 aa9.47□□□□□ -0.89
NCKIPSD-202ENST00000413374 OR4F21O95013 312 aa9.47□□□□□ -0.89
NCKIPSD-202ENST00000413374 LDLRP01130 860 aa9.47□□□□□ -0.89
NCKIPSD-202ENST00000413374 KLK1P06870 262 aa9.47□□□□□ -0.89
NCKIPSD-202ENST00000413374 FAM58BPP0C7Q3 252 aa9.47□□□□□ -0.89
NCKIPSD-202ENST00000413374 TAC1P20366 129 aa9.47□□□□□ -0.89
NCKIPSD-202ENST00000413374 TLX1P31314 330 aaPredicted RBP9.47□□□□□ -0.89
NCKIPSD-202ENST00000413374 SLCO1A2P46721 670 aa9.47□□□□□ -0.89
NCKIPSD-202ENST00000413374 SSR4P51571 173 aa9.47□□□□□ -0.89
NCKIPSD-202ENST00000413374 GPR85P60893 370 aa9.47□□□□□ -0.89
NCKIPSD-202ENST00000413374 FOLH1Q04609 750 aa9.47□□□□□ -0.89
NCKIPSD-202ENST00000413374 IFT88Q13099 833 aa9.47□□□□□ -0.89
NCKIPSD-202ENST00000413374 TRAF3Q13114 568 aa9.47□□□□□ -0.89
NCKIPSD-202ENST00000413374 SERTAD2Q14140 314 aa9.47□□□□□ -0.89
NCKIPSD-202ENST00000413374 INAQ16352 499 aa9.47□□□□□ -0.89
NCKIPSD-202ENST00000413374 C4orf17Q53FE4 359 aa9.47□□□□□ -0.89
NCKIPSD-202ENST00000413374 UNC50Q53HI1 259 aa9.47□□□□□ -0.89
NCKIPSD-202ENST00000413374 FRG2Q64ET8 278 aa9.47□□□□□ -0.89
NCKIPSD-202ENST00000413374 IL20RBQ6UXL0 311 aa9.47□□□□□ -0.89
NCKIPSD-202ENST00000413374 HSDL2Q6YN16 418 aa9.47□□□□□ -0.89
NCKIPSD-202ENST00000413374 MDGA2Q7Z553 956 aa9.47□□□□□ -0.89
NCKIPSD-202ENST00000413374 SULF2Q8IWU5 870 aa9.47□□□□□ -0.89
NCKIPSD-202ENST00000413374 LGI4Q8N135 537 aa9.47□□□□□ -0.89
NCKIPSD-202ENST00000413374 CPSF7Q8N684 471 aaKnown RBP9.47□□□□□ -0.89
NCKIPSD-202ENST00000413374 TMEM178AQ8NBL3 297 aa9.47□□□□□ -0.89
NCKIPSD-202ENST00000413374 MORN4Q8NDC4 146 aa9.47□□□□□ -0.89
NCKIPSD-202ENST00000413374 SLC2A12Q8TD20 617 aa9.47□□□□□ -0.89
NCKIPSD-202ENST00000413374 ZNF483Q8TF39 744 aaPredicted RBP9.47□□□□□ -0.89
NCKIPSD-202ENST00000413374 DAZLQ92904 295 aaKnown RBP9.47□□□□□ -0.89
NCKIPSD-202ENST00000413374 TMEM125Q96AQ2 219 aa9.47□□□□□ -0.89
NCKIPSD-202ENST00000413374 MTBPQ96DY7 904 aa9.47□□□□□ -0.89
NCKIPSD-202ENST00000413374 FRG2BQ96QU4 278 aa9.47□□□□□ -0.89
NCKIPSD-202ENST00000413374 HBEGFQ99075 208 aa9.47□□□□□ -0.89
NCKIPSD-202ENST00000413374 NTMT1Q9BV86 223 aa9.47□□□□□ -0.89
NCKIPSD-202ENST00000413374 ZNF717Q9BY31 904 aaPredicted RBP9.47□□□□□ -0.89
NCKIPSD-202ENST00000413374 MRPL1Q9BYD6 325 aaKnown RBP9.47□□□□□ -0.89
NCKIPSD-202ENST00000413374 TMCO1Q9UM00 188 aa9.47□□□□□ -0.89
NCKIPSD-202ENST00000413374 ERVK-11Q9UQG0 969 aa9.47□□□□□ -0.89
NCKIPSD-202ENST00000413374 ASB4Q9Y574 426 aa9.47□□□□□ -0.89
NCKIPSD-202ENST00000413374 UBR5O95071 2799 aaPredicted RBP9.47□□□□□ -0.89
NCKIPSD-202ENST00000413374 A0A0A6YYD5 115 aa9.46□□□□□ -0.9
NCKIPSD-202ENST00000413374 A0A1W2PS29 197 aa9.46□□□□□ -0.9
NCKIPSD-202ENST00000413374 G3V3Y1 287 aa9.46□□□□□ -0.9
NCKIPSD-202ENST00000413374 FOXE1O00358 373 aaPredicted RBP9.46□□□□□ -0.9
NCKIPSD-202ENST00000413374 NME2P1O60361 137 aa9.46□□□□□ -0.9
NCKIPSD-202ENST00000413374 OR10H2O60403 315 aa9.46□□□□□ -0.9
NCKIPSD-202ENST00000413374 ZG16O60844 167 aa9.46□□□□□ -0.9
NCKIPSD-202ENST00000413374 OR6B1O95007 311 aa9.46□□□□□ -0.9
NCKIPSD-202ENST00000413374 SCELO95171 688 aa9.46□□□□□ -0.9
NCKIPSD-202ENST00000413374 CLDN1O95832 211 aa9.46□□□□□ -0.9
NCKIPSD-202ENST00000413374 DDAH2O95865 285 aa9.46□□□□□ -0.9
NCKIPSD-202ENST00000413374 PDYNP01213 254 aa9.46□□□□□ -0.9
NCKIPSD-202ENST00000413374 RPS17P08708 135 aaKnown RBP9.46□□□□□ -0.9
NCKIPSD-202ENST00000413374 NME2P22392 152 aa9.46□□□□□ -0.9
NCKIPSD-202ENST00000413374 TRHRP34981 398 aaPredicted RBP9.46□□□□□ -0.9
NCKIPSD-202ENST00000413374 HSD17B3P37058 310 aa9.46□□□□□ -0.9
NCKIPSD-202ENST00000413374 BUD31P41223 144 aaPredicted RBP9.46□□□□□ -0.9
NCKIPSD-202ENST00000413374 STT3AP46977 705 aa9.46□□□□□ -0.9
NCKIPSD-202ENST00000413374 MEOX1P50221 254 aa9.46□□□□□ -0.9
NCKIPSD-202ENST00000413374 RNF4P78317 190 aa9.46□□□□□ -0.9
NCKIPSD-202ENST00000413374 HSF1Q00613 529 aa9.46□□□□□ -0.9
NCKIPSD-202ENST00000413374 TNFRSF17Q02223 184 aa9.46□□□□□ -0.9
NCKIPSD-202ENST00000413374 CLCQ05315 142 aa9.46□□□□□ -0.9
NCKIPSD-202ENST00000413374 CUL3Q13618 768 aa9.46□□□□□ -0.9
NCKIPSD-202ENST00000413374 ZNF267Q14586 743 aaPredicted RBP9.46□□□□□ -0.9
NCKIPSD-202ENST00000413374 ZNF750Q32MQ0 723 aa9.46□□□□□ -0.9
NCKIPSD-202ENST00000413374 RNFT1Q5M7Z0 435 aa9.46□□□□□ -0.9
NCKIPSD-202ENST00000413374 TCHHL1Q5QJ38 904 aaPredicted RBP9.46□□□□□ -0.9
NCKIPSD-202ENST00000413374 MRM1Q6IN84 353 aaKnown RBP9.46□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms