RNA–Protein interactions for RNA: ENST00000411971.5

SCAMP4-203, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 5

Gene SCAMP4, Length 783 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-203ENST00000411971 SLC2A12Q8TD20 617 aa15.28■□□□□ 0.04
SCAMP4-203ENST00000411971 ASB15Q8WXK1 588 aa15.28■□□□□ 0.04
SCAMP4-203ENST00000411971 NXNL1Q96CM4 212 aa15.28■□□□□ 0.04
SCAMP4-203ENST00000411971 SEC16BQ96JE7 1060 aa15.28■□□□□ 0.04
SCAMP4-203ENST00000411971 EFCAB11Q9BUY7 163 aa15.28■□□□□ 0.04
SCAMP4-203ENST00000411971 CAPS2Q9BXY5 557 aa15.28■□□□□ 0.04
SCAMP4-203ENST00000411971 TTTY12Q9BZ98 90 aa15.28■□□□□ 0.04
SCAMP4-203ENST00000411971 ZDHHC11Q9H8X9 412 aa15.28■□□□□ 0.04
SCAMP4-203ENST00000411971 TIMMDC1Q9NPL8 285 aa15.28■□□□□ 0.04
SCAMP4-203ENST00000411971 PNPLA3Q9NST1 481 aa15.28■□□□□ 0.04
SCAMP4-203ENST00000411971 HPF1Q9NWY4 346 aa15.28■□□□□ 0.04
SCAMP4-203ENST00000411971 ITGB1BP2Q9UKP3 347 aa15.28■□□□□ 0.04
SCAMP4-203ENST00000411971 RNF112Q9ULX5 631 aa15.28■□□□□ 0.04
SCAMP4-203ENST00000411971 ERVK-11Q9UQG0 969 aa15.28■□□□□ 0.04
SCAMP4-203ENST00000411971 CLCA3PQ9Y6N3 262 aa15.28■□□□□ 0.04
SCAMP4-203ENST00000411971 SPG11Q96JI7 2443 aa15.28■□□□□ 0.04
SCAMP4-203ENST00000411971 KIAA1549Q9HCM3 1950 aa15.27■□□□□ 0.04
SCAMP4-203ENST00000411971 A0A1W2PS29 197 aa15.27■□□□□ 0.04
SCAMP4-203ENST00000411971 FAM187AA6NFU0 413 aa15.27■□□□□ 0.04
SCAMP4-203ENST00000411971 C17orf105B2RV13 164 aa15.27■□□□□ 0.04
SCAMP4-203ENST00000411971 NADKO95544 446 aaPredicted RBP15.27■□□□□ 0.04
SCAMP4-203ENST00000411971 IGFBP2P18065 325 aa15.27■□□□□ 0.04
SCAMP4-203ENST00000411971 HIST1H1TP22492 207 aaPredicted RBP15.27■□□□□ 0.04
SCAMP4-203ENST00000411971 DNASE1L1P49184 302 aa15.27■□□□□ 0.04
SCAMP4-203ENST00000411971 NUP107P57740 925 aa15.27■□□□□ 0.04
SCAMP4-203ENST00000411971 PPIAP62937 165 aaKnown RBP15.27■□□□□ 0.04
SCAMP4-203ENST00000411971 IGLV3-21P80748 117 aaPredicted RBP15.27■□□□□ 0.04
SCAMP4-203ENST00000411971 TBCCQ15814 346 aa15.27■□□□□ 0.04
SCAMP4-203ENST00000411971 C18orf63Q68DL7 685 aa15.27■□□□□ 0.04
SCAMP4-203ENST00000411971 HSDL2Q6YN16 418 aa15.27■□□□□ 0.04
SCAMP4-203ENST00000411971 MEX3BQ6ZN04 569 aaKnown RBP15.27■□□□□ 0.04
SCAMP4-203ENST00000411971 CYS1Q717R9 158 aa15.27■□□□□ 0.04
SCAMP4-203ENST00000411971 CTAGE3PQ8IX95 158 aa15.27■□□□□ 0.04
SCAMP4-203ENST00000411971 C9orf40Q8IXQ3 194 aa15.27■□□□□ 0.04
SCAMP4-203ENST00000411971 CENPLQ8N0S6 344 aaPredicted RBP15.27■□□□□ 0.04
SCAMP4-203ENST00000411971 TMEM251Q8N6I4 163 aa15.27■□□□□ 0.04
SCAMP4-203ENST00000411971 PPM1NQ8N819 430 aa15.27■□□□□ 0.04
SCAMP4-203ENST00000411971 MORN4Q8NDC4 146 aa15.27■□□□□ 0.04
SCAMP4-203ENST00000411971 OR5M9Q8NGP3 310 aa15.27■□□□□ 0.04
SCAMP4-203ENST00000411971 FBXO25Q8TCJ0 367 aa15.27■□□□□ 0.04
SCAMP4-203ENST00000411971 KCTD4Q8WVF5 259 aa15.27■□□□□ 0.04
SCAMP4-203ENST00000411971 PPWD1Q96BP3 646 aaKnown RBP15.27■□□□□ 0.04
SCAMP4-203ENST00000411971 TSPAN17Q96FV3 270 aa15.27■□□□□ 0.04
SCAMP4-203ENST00000411971 SPOCK3Q9BQ16 436 aa15.27■□□□□ 0.04
SCAMP4-203ENST00000411971 CCDC77Q9BR77 488 aa15.27■□□□□ 0.04
SCAMP4-203ENST00000411971 ZNF717Q9BY31 904 aaPredicted RBP15.27■□□□□ 0.04
SCAMP4-203ENST00000411971 RUBCNLQ9H714 662 aa15.27■□□□□ 0.04
SCAMP4-203ENST00000411971 CNOT10Q9H9A5 744 aaKnown RBP15.27■□□□□ 0.04
SCAMP4-203ENST00000411971 COPS7BQ9H9Q2 264 aaPredicted RBP15.27■□□□□ 0.04
SCAMP4-203ENST00000411971 LYRM4Q9HD34 91 aa15.27■□□□□ 0.04
SCAMP4-203ENST00000411971 MRPS33Q9Y291 106 aaKnown RBP15.27■□□□□ 0.04
SCAMP4-203ENST00000411971 FAM90A27PA6NNH2 459 aa15.26■□□□□ 0.03
SCAMP4-203ENST00000411971 NPIPA2E9PIF3 369 aa15.26■□□□□ 0.03
SCAMP4-203ENST00000411971 NPIPA3F8WFD2 350 aa15.26■□□□□ 0.03
SCAMP4-203ENST00000411971 EIF3HO15372 352 aaKnown RBP eCLIP15.26■□□□□ 0.03
SCAMP4-203ENST00000411971 TOXO94900 526 aa15.26■□□□□ 0.03
SCAMP4-203ENST00000411971 IGKV3-11P04433 115 aa15.26■□□□□ 0.03
SCAMP4-203ENST00000411971 PCNAP12004 261 aa15.26■□□□□ 0.03
SCAMP4-203ENST00000411971 MAGEA5P43359 124 aa15.26■□□□□ 0.03
SCAMP4-203ENST00000411971 PLTPP55058 493 aa15.26■□□□□ 0.03
SCAMP4-203ENST00000411971 HNRNPH2P55795 449 aaKnown RBP15.26■□□□□ 0.03
SCAMP4-203ENST00000411971 STX4Q12846 297 aa15.26■□□□□ 0.03
SCAMP4-203ENST00000411971 RTL6Q6ICC9 239 aa15.26■□□□□ 0.03
SCAMP4-203ENST00000411971 LRRC70Q7Z2Q7 622 aa15.26■□□□□ 0.03
SCAMP4-203ENST00000411971 OR14A16Q8NHC5 309 aa15.26■□□□□ 0.03
SCAMP4-203ENST00000411971 FBF1Q8TES7 1133 aa15.26■□□□□ 0.03
SCAMP4-203ENST00000411971 CA5BP1Q8WTZ4 195 aa15.26■□□□□ 0.03
SCAMP4-203ENST00000411971 UBTD2Q8WUN7 234 aa15.26■□□□□ 0.03
SCAMP4-203ENST00000411971 KCNC2Q96PR1 638 aa15.26■□□□□ 0.03
SCAMP4-203ENST00000411971 TBCDQ9BTW9 1192 aa15.26■□□□□ 0.03
SCAMP4-203ENST00000411971 PROK2Q9HC23 129 aa15.26■□□□□ 0.03
SCAMP4-203ENST00000411971 TUBA8Q9NY65 449 aaPredicted RBP15.26■□□□□ 0.03
SCAMP4-203ENST00000411971 ATG4BQ9Y4P1 393 aa15.26■□□□□ 0.03
SCAMP4-203ENST00000411971 FAM215AQ9Y5M1 114 aa15.26■□□□□ 0.03
SCAMP4-203ENST00000411971 A0A088AWK7 358 aa15.25■□□□□ 0.03
SCAMP4-203ENST00000411971 SUPT3HB4E1H0 165 aa15.25■□□□□ 0.03
SCAMP4-203ENST00000411971 PLPP1O14494 284 aa15.25■□□□□ 0.03
SCAMP4-203ENST00000411971 SUPT3HO75486 399 aa15.25■□□□□ 0.03
SCAMP4-203ENST00000411971 CLPSP04118 112 aa15.25■□□□□ 0.03
SCAMP4-203ENST00000411971 ENDOUP21128 410 aaKnown RBP15.25■□□□□ 0.03
SCAMP4-203ENST00000411971 ZNF10P21506 573 aaPredicted RBP15.25■□□□□ 0.03
SCAMP4-203ENST00000411971 PIGAP37287 484 aa15.25■□□□□ 0.03
SCAMP4-203ENST00000411971 GUCY2DQ02846 1103 aa15.25■□□□□ 0.03
SCAMP4-203ENST00000411971 TLE4Q04727 773 aa15.25■□□□□ 0.03
SCAMP4-203ENST00000411971 PCDH1Q08174 1060 aa15.25■□□□□ 0.03
SCAMP4-203ENST00000411971 ASPHQ12797 758 aa15.25■□□□□ 0.03
SCAMP4-203ENST00000411971 CALCOCO2Q13137 446 aa15.25■□□□□ 0.03
SCAMP4-203ENST00000411971 LAPTM5Q13571 262 aa15.25■□□□□ 0.03
SCAMP4-203ENST00000411971 DDX39BQ13838 428 aaKnown RBP15.25■□□□□ 0.03
SCAMP4-203ENST00000411971 SLMAPQ14BN4 828 aa15.25■□□□□ 0.03
SCAMP4-203ENST00000411971 TESK1Q15569 626 aa15.25■□□□□ 0.03
SCAMP4-203ENST00000411971 GXYLT1Q4G148 440 aa15.25■□□□□ 0.03
SCAMP4-203ENST00000411971 GRTP1Q5TC63 336 aa15.25■□□□□ 0.03
SCAMP4-203ENST00000411971 KHDRBS2Q5VWX1 349 aaKnown RBP15.25■□□□□ 0.03
SCAMP4-203ENST00000411971 ARHGAP11AQ6P4F7 1023 aa15.25■□□□□ 0.03
SCAMP4-203ENST00000411971 HUS1BQ8NHY5 278 aa15.25■□□□□ 0.03
SCAMP4-203ENST00000411971 CDKL2Q92772 493 aa15.25■□□□□ 0.03
SCAMP4-203ENST00000411971 DAZLQ92904 295 aaKnown RBP15.25■□□□□ 0.03
SCAMP4-203ENST00000411971 C14orf79Q96F83 325 aa15.25■□□□□ 0.03
SCAMP4-203ENST00000411971 SH2D2AQ9NP31 389 aa15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms