RNA–Protein interactions for RNA: ENST00000409915.8

SF3B1-202, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2 BASIC

Gene SF3B1, Length 600 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-202ENST00000409915 EML5Q05BV3 1969 aa4.36□□□□□ -1.71
SF3B1-202ENST00000409915 DOCK4Q8N1I0 1966 aa4.36□□□□□ -1.71
SF3B1-202ENST00000409915 FANCMQ8IYD8 2048 aa4.36□□□□□ -1.71
SF3B1-202ENST00000409915 TRAV6A0A075B6T7 132 aa4.36□□□□□ -1.71
SF3B1-202ENST00000409915 TBC1D3DA0A087WVF3 549 aa4.36□□□□□ -1.71
SF3B1-202ENST00000409915 TBC1D3IA0A087WXS9 549 aa4.36□□□□□ -1.71
SF3B1-202ENST00000409915 TBC1D3EA0A087X179 549 aa4.36□□□□□ -1.71
SF3B1-202ENST00000409915 TBC1D3KA0A087X1G2 549 aa4.36□□□□□ -1.71
SF3B1-202ENST00000409915 IGHV1OR15-9A0A0B4J2B8 117 aa4.36□□□□□ -1.71
SF3B1-202ENST00000409915 MAGEB16A2A368 324 aa4.36□□□□□ -1.71
SF3B1-202ENST00000409915 TBC1D3FA6NER0 549 aaPredicted RBP4.36□□□□□ -1.71
SF3B1-202ENST00000409915 FAM47DPA6NHR8 397 aa4.36□□□□□ -1.71
SF3B1-202ENST00000409915 MBD3L5A6NJ08 208 aaPredicted RBP4.36□□□□□ -1.71
SF3B1-202ENST00000409915 ZSCAN5BA6NJL1 495 aa4.36□□□□□ -1.71
SF3B1-202ENST00000409915 CAPN14A8MX76 684 aa4.36□□□□□ -1.71
SF3B1-202ENST00000409915 TBC1D3LB9A6J9 549 aa4.36□□□□□ -1.71
SF3B1-202ENST00000409915 KPNA4O00629 521 aaPredicted RBP4.36□□□□□ -1.71
SF3B1-202ENST00000409915 ZW10O43264 779 aa4.36□□□□□ -1.71
SF3B1-202ENST00000409915 ITM2AO43736 263 aa4.36□□□□□ -1.71
SF3B1-202ENST00000409915 HS6ST1O60243 411 aa4.36□□□□□ -1.71
SF3B1-202ENST00000409915 ZNF821O75541 412 aaPredicted RBP4.36□□□□□ -1.71
SF3B1-202ENST00000409915 SPAG6O75602 509 aa4.36□□□□□ -1.71
SF3B1-202ENST00000409915 DCTN3O75935 186 aa4.36□□□□□ -1.71
SF3B1-202ENST00000409915 OR6B1O95007 311 aa4.36□□□□□ -1.71
SF3B1-202ENST00000409915 PRSS23O95084 383 aa4.36□□□□□ -1.71
SF3B1-202ENST00000409915 ZWINTO95229 277 aa4.36□□□□□ -1.71
SF3B1-202ENST00000409915 MT-ATP6P00846 226 aa4.36□□□□□ -1.71
SF3B1-202ENST00000409915 GASTP01350 101 aa4.36□□□□□ -1.71
SF3B1-202ENST00000409915 IL1BP01584 269 aa4.36□□□□□ -1.71
SF3B1-202ENST00000409915 CTSLP07711 333 aa4.36□□□□□ -1.71
SF3B1-202ENST00000409915 ABHD2P08910 425 aa4.36□□□□□ -1.71
SF3B1-202ENST00000409915 SNRPAP09012 282 aaKnown RBP4.36□□□□□ -1.71
SF3B1-202ENST00000409915 FAM58BPP0C7Q3 252 aa4.36□□□□□ -1.71
SF3B1-202ENST00000409915 TBC1D3HP0C7X1 549 aa4.36□□□□□ -1.71
SF3B1-202ENST00000409915 ZCCHC18P0CG32 403 aa4.36□□□□□ -1.71
SF3B1-202ENST00000409915 PEPDP12955 493 aa4.36□□□□□ -1.71
SF3B1-202ENST00000409915 HGFP14210 728 aa4.36□□□□□ -1.71
SF3B1-202ENST00000409915 MYF6P23409 242 aa4.36□□□□□ -1.71
SF3B1-202ENST00000409915 PCSK6P29122 969 aa4.36□□□□□ -1.71
SF3B1-202ENST00000409915 ARL4AP40617 200 aa4.36□□□□□ -1.71
SF3B1-202ENST00000409915 PTGER3P43115 390 aa4.36□□□□□ -1.71
SF3B1-202ENST00000409915 RGRP47804 291 aa4.36□□□□□ -1.71
SF3B1-202ENST00000409915 KCNJ1P48048 391 aa4.36□□□□□ -1.71
SF3B1-202ENST00000409915 PCP4P48539 62 aa4.36□□□□□ -1.71
SF3B1-202ENST00000409915 HSPA13P48723 471 aa4.36□□□□□ -1.71
SF3B1-202ENST00000409915 SERPINH1P50454 418 aaKnown RBP4.36□□□□□ -1.71
SF3B1-202ENST00000409915 TPMTP51580 245 aa4.36□□□□□ -1.71
SF3B1-202ENST00000409915 PTTG1IPP53801 180 aa4.36□□□□□ -1.71
SF3B1-202ENST00000409915 RPS14P62263 151 aaKnown RBP4.36□□□□□ -1.71
SF3B1-202ENST00000409915 DYNLT1P63172 113 aa4.36□□□□□ -1.71
SF3B1-202ENST00000409915 CYP4F2P78329 520 aa4.36□□□□□ -1.71
SF3B1-202ENST00000409915 IL13RA1P78552 427 aa4.36□□□□□ -1.71
SF3B1-202ENST00000409915 MRPS15P82914 257 aaKnown RBP4.36□□□□□ -1.71
SF3B1-202ENST00000409915 CD83Q01151 205 aa4.36□□□□□ -1.71
SF3B1-202ENST00000409915 BNIP3Q12983 259 aa4.36□□□□□ -1.71
SF3B1-202ENST00000409915 IL24Q13007 206 aa4.36□□□□□ -1.71
SF3B1-202ENST00000409915 IKZF1Q13422 519 aa4.36□□□□□ -1.71
SF3B1-202ENST00000409915 MED21Q13503 144 aa4.36□□□□□ -1.71
SF3B1-202ENST00000409915 FHL3Q13643 280 aa4.36□□□□□ -1.71
SF3B1-202ENST00000409915 RAPSNQ13702 412 aa4.36□□□□□ -1.71
SF3B1-202ENST00000409915 RUNX2Q13950 521 aa4.36□□□□□ -1.71
SF3B1-202ENST00000409915 GAMTQ14353 236 aa4.36□□□□□ -1.71
SF3B1-202ENST00000409915 ELAVL3Q14576 367 aaKnown RBP4.36□□□□□ -1.71
SF3B1-202ENST00000409915 CST6Q15828 149 aa4.36□□□□□ -1.71
SF3B1-202ENST00000409915 HADHQ16836 314 aaKnown RBP4.36□□□□□ -1.71
SF3B1-202ENST00000409915 ZIK1Q3SY52 487 aaPredicted RBP4.36□□□□□ -1.71
SF3B1-202ENST00000409915 NADK2Q4G0N4 442 aa4.36□□□□□ -1.71
SF3B1-202ENST00000409915 KCTD21Q4G0X4 260 aa4.36□□□□□ -1.71
SF3B1-202ENST00000409915 TIGD2Q4W5G0 525 aa4.36□□□□□ -1.71
SF3B1-202ENST00000409915 ACSBG2Q5FVE4 666 aa4.36□□□□□ -1.71
SF3B1-202ENST00000409915 LRRC73Q5JTD7 316 aa4.36□□□□□ -1.71
SF3B1-202ENST00000409915 RIPPLY2Q5TAB7 128 aa4.36□□□□□ -1.71
SF3B1-202ENST00000409915 PMS2CLQ68D20 193 aa4.36□□□□□ -1.71
SF3B1-202ENST00000409915 NCBP2-AS2Q69YL0 99 aa4.36□□□□□ -1.71
SF3B1-202ENST00000409915 TBC1D3GQ6DHY5 549 aa4.36□□□□□ -1.71
SF3B1-202ENST00000409915 TBC1D3CQ6IPX1 549 aa4.36□□□□□ -1.71
SF3B1-202ENST00000409915 TCEAL6Q6IPX3 200 aa4.36□□□□□ -1.71
SF3B1-202ENST00000409915 C11orf63Q6NUN7 778 aa4.36□□□□□ -1.71
SF3B1-202ENST00000409915 AFTPHQ6ULP2 937 aa4.36□□□□□ -1.71
SF3B1-202ENST00000409915 SLC36A4Q6YBV0 504 aa4.36□□□□□ -1.71
SF3B1-202ENST00000409915 DPY19L3Q6ZPD9 716 aa4.36□□□□□ -1.71
SF3B1-202ENST00000409915 GPR141Q7Z602 305 aa4.36□□□□□ -1.71
SF3B1-202ENST00000409915 TBC1D3Q8IZP1 549 aaPredicted RBP4.36□□□□□ -1.71
SF3B1-202ENST00000409915 CLYBLQ8N0X4 340 aa4.36□□□□□ -1.71
SF3B1-202ENST00000409915 UMODL1-AS1Q8N2C9 162 aa4.36□□□□□ -1.71
SF3B1-202ENST00000409915 RYBPQ8N488 228 aaPredicted RBP4.36□□□□□ -1.71
SF3B1-202ENST00000409915 PQLC3Q8N755 202 aa4.36□□□□□ -1.71
SF3B1-202ENST00000409915 OR2A12Q8NGT7 310 aa4.36□□□□□ -1.71
SF3B1-202ENST00000409915 DNAJB14Q8TBM8 379 aa4.36□□□□□ -1.71
SF3B1-202ENST00000409915 ACTRT2Q8TDY3 377 aa4.36□□□□□ -1.71
SF3B1-202ENST00000409915 TRUB1Q8WWH5 349 aaKnown RBP4.36□□□□□ -1.71
SF3B1-202ENST00000409915 CKAP2Q8WWK9 683 aa4.36□□□□□ -1.71
SF3B1-202ENST00000409915 METTL21AQ8WXB1 218 aa4.36□□□□□ -1.71
SF3B1-202ENST00000409915 SNX19Q92543 992 aa4.36□□□□□ -1.71
SF3B1-202ENST00000409915 CNOT9Q92600 299 aaKnown RBP4.36□□□□□ -1.71
SF3B1-202ENST00000409915 SCAMP4Q969E2 229 aa4.36□□□□□ -1.71
SF3B1-202ENST00000409915 TCEAL3Q969E4 200 aa4.36□□□□□ -1.71
SF3B1-202ENST00000409915 UBE2FQ969M7 185 aa4.36□□□□□ -1.71
SF3B1-202ENST00000409915 ELMOD3Q96FG2 381 aa4.36□□□□□ -1.71
SF3B1-202ENST00000409915 ZNF419Q96HQ0 510 aaPredicted RBP4.36□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms