RNA–Protein interactions for RNA: ENST00000409783.6

PTCD3-203, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 5

Gene PTCD3, Length 587 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-203ENST00000409783 LDB3O75112 727 aa20.95■□□□□ 0.94
PTCD3-203ENST00000409783 CRCPO75575 148 aa20.95■□□□□ 0.94
PTCD3-203ENST00000409783 AIFM1O95831 613 aa20.95■□□□□ 0.94
PTCD3-203ENST00000409783 PRB1P04280 392 aa20.95■□□□□ 0.94
PTCD3-203ENST00000409783 SERPINE1P05121 402 aa20.95■□□□□ 0.94
PTCD3-203ENST00000409783 SERPINA7P05543 415 aa20.95■□□□□ 0.94
PTCD3-203ENST00000409783 ITGA3P26006 1051 aa20.95■□□□□ 0.94
PTCD3-203ENST00000409783 PPP2R1BP30154 601 aa20.95■□□□□ 0.94
PTCD3-203ENST00000409783 IGLV3-21P80748 117 aaPredicted RBP20.95■□□□□ 0.94
PTCD3-203ENST00000409783 SLC13A2Q13183 592 aa20.95■□□□□ 0.94
PTCD3-203ENST00000409783 CCNYL2Q5T2Q4 361 aa20.95■□□□□ 0.94
PTCD3-203ENST00000409783 PLAG1Q6DJT9 500 aa20.95■□□□□ 0.94
PTCD3-203ENST00000409783 KBTBD2Q8IY47 623 aa20.95■□□□□ 0.94
PTCD3-203ENST00000409783 NFAM1Q8NET5 270 aaPredicted RBP20.95■□□□□ 0.94
PTCD3-203ENST00000409783 THOC3Q96J01 351 aaKnown RBP20.95■□□□□ 0.94
PTCD3-203ENST00000409783 ATP6V1G3Q96LB4 118 aa20.95■□□□□ 0.94
PTCD3-203ENST00000409783 LPAR4Q99677 370 aa20.95■□□□□ 0.94
PTCD3-203ENST00000409783 LHPPQ9H008 270 aa20.95■□□□□ 0.94
PTCD3-203ENST00000409783 RPF2Q9H7B2 306 aaKnown RBP20.95■□□□□ 0.94
PTCD3-203ENST00000409783 ZNF395Q9H8N7 513 aaPredicted RBP20.95■□□□□ 0.94
PTCD3-203ENST00000409783 EML4Q9HC35 981 aaKnown RBP20.95■□□□□ 0.94
PTCD3-203ENST00000409783 ZNF71Q9NQZ8 489 aaPredicted RBP20.95■□□□□ 0.94
PTCD3-203ENST00000409783 SIRT5Q9NXA8 310 aa20.95■□□□□ 0.94
PTCD3-203ENST00000409783 TRAF6Q9Y4K3 522 aa20.95■□□□□ 0.94
PTCD3-203ENST00000409783 PTGDR2Q9Y5Y4 395 aa20.95■□□□□ 0.94
PTCD3-203ENST00000409783 WASHC1A8K0Z3 465 aa20.94■□□□□ 0.94
PTCD3-203ENST00000409783 NPIPB8E9PQR5 432 aa20.94■□□□□ 0.94
PTCD3-203ENST00000409783 KALRNO60229 2985 aa20.94■□□□□ 0.94
PTCD3-203ENST00000409783 FGF17O60258 216 aa20.94■□□□□ 0.94
PTCD3-203ENST00000409783 LYPLA1O75608 230 aaPredicted RBP20.94■□□□□ 0.94
PTCD3-203ENST00000409783 C1QL1O75973 258 aa20.94■□□□□ 0.94
PTCD3-203ENST00000409783 GALNT18Q6P9A2 607 aa20.94■□□□□ 0.94
PTCD3-203ENST00000409783 RIPOR1Q6ZS17 1223 aa20.94■□□□□ 0.94
PTCD3-203ENST00000409783 CLYBLQ8N0X4 340 aa20.94■□□□□ 0.94
PTCD3-203ENST00000409783 TM4SF18Q96CE8 201 aa20.94■□□□□ 0.94
PTCD3-203ENST00000409783 C20orf27Q9GZN8 174 aa20.94■□□□□ 0.94
PTCD3-203ENST00000409783 ZDHHC2Q9UIJ5 367 aa20.94■□□□□ 0.94
PTCD3-203ENST00000409783 MCM8Q9UJA3 840 aa20.94■□□□□ 0.94
PTCD3-203ENST00000409783 PCDHGB7Q9Y5F8 929 aa20.94■□□□□ 0.94
PTCD3-203ENST00000409783 CPAMD8Q8IZJ3 1885 aa20.93■□□□□ 0.94
PTCD3-203ENST00000409783 MYOCOSA0A1B0GUC4 107 aa20.93■□□□□ 0.94
PTCD3-203ENST00000409783 NR2F6P10588 404 aa20.93■□□□□ 0.94
PTCD3-203ENST00000409783 ITGAMP11215 1152 aa20.93■□□□□ 0.94
PTCD3-203ENST00000409783 ICAM2P13598 275 aa20.93■□□□□ 0.94
PTCD3-203ENST00000409783 BGNP21810 368 aa20.93■□□□□ 0.94
PTCD3-203ENST00000409783 BUD31P41223 144 aaPredicted RBP20.93■□□□□ 0.94
PTCD3-203ENST00000409783 SLC26A5P58743 744 aa20.93■□□□□ 0.94
PTCD3-203ENST00000409783 ACTN3Q08043 901 aaPredicted RBP20.93■□□□□ 0.94
PTCD3-203ENST00000409783 LACTB2Q53H82 288 aaPredicted RBP20.93■□□□□ 0.94
PTCD3-203ENST00000409783 SPIN4Q56A73 249 aa20.93■□□□□ 0.94
PTCD3-203ENST00000409783 SH2D4BQ5SQS7 431 aa20.93■□□□□ 0.94
PTCD3-203ENST00000409783 VWA5B1Q5TIE3 1220 aa20.93■□□□□ 0.94
PTCD3-203ENST00000409783 HHATQ5VTY9 493 aa20.93■□□□□ 0.94
PTCD3-203ENST00000409783 Q6ZSR9 355 aa20.93■□□□□ 0.94
PTCD3-203ENST00000409783 OR2T11Q8NH01 316 aa20.93■□□□□ 0.94
PTCD3-203ENST00000409783 TANKQ92844 425 aa20.93■□□□□ 0.94
PTCD3-203ENST00000409783 ALOXE3Q9BYJ1 711 aa20.93■□□□□ 0.94
PTCD3-203ENST00000409783 VTI1BQ9UEU0 232 aa20.93■□□□□ 0.94
PTCD3-203ENST00000409783 FIS1Q9Y3D6 152 aa20.93■□□□□ 0.94
PTCD3-203ENST00000409783 SAGE2PA6NJ88 616 aa20.92■□□□□ 0.94
PTCD3-203ENST00000409783 GLOD5A6NK44 160 aa20.92■□□□□ 0.94
PTCD3-203ENST00000409783 A8MUA0 341 aa20.92■□□□□ 0.94
PTCD3-203ENST00000409783 TMEM114B3SHH9 223 aa20.92■□□□□ 0.94
PTCD3-203ENST00000409783 PGRMC2O15173 223 aa20.92■□□□□ 0.94
PTCD3-203ENST00000409783 RSL1D1O76021 490 aaKnown RBP20.92■□□□□ 0.94
PTCD3-203ENST00000409783 PRPH2P23942 346 aa20.92■□□□□ 0.94
PTCD3-203ENST00000409783 TLX1P31314 330 aaPredicted RBP20.92■□□□□ 0.94
PTCD3-203ENST00000409783 PGDP52209 483 aa20.92■□□□□ 0.94
PTCD3-203ENST00000409783 MAPK12P53778 367 aa20.92■□□□□ 0.94
PTCD3-203ENST00000409783 ABCE1P61221 599 aaKnown RBP20.92■□□□□ 0.94
PTCD3-203ENST00000409783 TRA2BP62995 288 aaKnown RBP20.92■□□□□ 0.94
PTCD3-203ENST00000409783 ID2Q02363 134 aa20.92■□□□□ 0.94
PTCD3-203ENST00000409783 ACSM2AQ08AH3 577 aa20.92■□□□□ 0.94
PTCD3-203ENST00000409783 EXT1Q16394 746 aa20.92■□□□□ 0.94
PTCD3-203ENST00000409783 BTBD16Q32M84 506 aa20.92■□□□□ 0.94
PTCD3-203ENST00000409783 NDUFAF5Q5TEU4 345 aa20.92■□□□□ 0.94
PTCD3-203ENST00000409783 ACSM2BQ68CK6 577 aa20.92■□□□□ 0.94
PTCD3-203ENST00000409783 ASB18Q6ZVZ8 466 aa20.92■□□□□ 0.94
PTCD3-203ENST00000409783 OR4N5Q8IXE1 308 aa20.92■□□□□ 0.94
PTCD3-203ENST00000409783 PPP1R14CQ8TAE6 165 aa20.92■□□□□ 0.94
PTCD3-203ENST00000409783 DNAJB14Q8TBM8 379 aa20.92■□□□□ 0.94
PTCD3-203ENST00000409783 M1APQ8TC57 530 aa20.92■□□□□ 0.94
PTCD3-203ENST00000409783 SORT1Q99523 831 aa20.92■□□□□ 0.94
PTCD3-203ENST00000409783 ZBTB20Q9HC78 741 aaPredicted RBP20.92■□□□□ 0.94
PTCD3-203ENST00000409783 MMP25Q9NPA2 562 aa20.92■□□□□ 0.94
PTCD3-203ENST00000409783 ZNF446Q9NWS9 450 aa20.92■□□□□ 0.94
PTCD3-203ENST00000409783 PPIEQ9UNP9 301 aaKnown RBP20.92■□□□□ 0.94
PTCD3-203ENST00000409783 ARHGAP10A1A4S6 786 aa20.91■□□□□ 0.94
PTCD3-203ENST00000409783 SYNDIG1LA6NDD5 238 aa20.91■□□□□ 0.94
PTCD3-203ENST00000409783 GRK2P25098 689 aa20.91■□□□□ 0.94
PTCD3-203ENST00000409783 TIA1P31483 386 aaKnown RBP eCLIP20.91■□□□□ 0.94
PTCD3-203ENST00000409783 SOX11P35716 441 aa20.91■□□□□ 0.94
PTCD3-203ENST00000409783 GPR143P51810 404 aa20.91■□□□□ 0.94
PTCD3-203ENST00000409783 FOLH1Q04609 750 aa20.91■□□□□ 0.94
PTCD3-203ENST00000409783 BTKQ06187 659 aa20.91■□□□□ 0.94
PTCD3-203ENST00000409783 STX4Q12846 297 aa20.91■□□□□ 0.94
PTCD3-203ENST00000409783 SERTAD2Q14140 314 aa20.91■□□□□ 0.94
PTCD3-203ENST00000409783 KIAA0040Q15053 153 aa20.91■□□□□ 0.94
PTCD3-203ENST00000409783 TERF2Q15554 542 aa20.91■□□□□ 0.94
PTCD3-203ENST00000409783 H3F3CQ6NXT2 135 aa20.91■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms