RNA–Protein interactions for RNA: ENST00000409531.5

TSPAN4-208, Transcript of tetraspanin 4, humanhuman

TSL 5 BASIC

Gene TSPAN4, Length 1,339 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-208ENST00000409531 ASB4Q9Y574 426 aa15.58■□□□□ 0.08
TSPAN4-208ENST00000409531 CCDC88CQ9P219 2028 aa15.58■□□□□ 0.08
TSPAN4-208ENST00000409531 PROM1O43490 865 aa15.57■□□□□ 0.08
TSPAN4-208ENST00000409531 PRMT3O60678 531 aa15.57■□□□□ 0.08
TSPAN4-208ENST00000409531 DRD2P14416 443 aa15.57■□□□□ 0.08
TSPAN4-208ENST00000409531 DDX5P17844 614 aaKnown RBP15.57■□□□□ 0.08
TSPAN4-208ENST00000409531 ITGAXP20702 1163 aa15.57■□□□□ 0.08
TSPAN4-208ENST00000409531 JAK1P23458 1154 aa15.57■□□□□ 0.08
TSPAN4-208ENST00000409531 DLSTP36957 453 aa15.57■□□□□ 0.08
TSPAN4-208ENST00000409531 RPL3P39023 403 aaKnown RBP15.57■□□□□ 0.08
TSPAN4-208ENST00000409531 XCR1P46094 333 aa15.57■□□□□ 0.08
TSPAN4-208ENST00000409531 ATP4BP51164 291 aa15.57■□□□□ 0.08
TSPAN4-208ENST00000409531 HNRNPH2P55795 449 aaKnown RBP15.57■□□□□ 0.08
TSPAN4-208ENST00000409531 OLR1P78380 273 aa15.57■□□□□ 0.08
TSPAN4-208ENST00000409531 TNFRSF17Q02223 184 aa15.57■□□□□ 0.08
TSPAN4-208ENST00000409531 OCA2Q04671 838 aa15.57■□□□□ 0.08
TSPAN4-208ENST00000409531 KLC1Q07866 573 aa15.57■□□□□ 0.08
TSPAN4-208ENST00000409531 NDUFAF5Q5TEU4 345 aa15.57■□□□□ 0.08
TSPAN4-208ENST00000409531 TMEM198Q66K66 360 aa15.57■□□□□ 0.08
TSPAN4-208ENST00000409531 ZNF517Q6ZMY9 492 aaPredicted RBP15.57■□□□□ 0.08
TSPAN4-208ENST00000409531 ANKS4BQ8N8V4 417 aa15.57■□□□□ 0.08
TSPAN4-208ENST00000409531 CDC26Q8NHZ8 85 aa15.57■□□□□ 0.08
TSPAN4-208ENST00000409531 ZDHHC19Q8WVZ1 309 aaPredicted RBP15.57■□□□□ 0.08
TSPAN4-208ENST00000409531 TM4SF18Q96CE8 201 aa15.57■□□□□ 0.08
TSPAN4-208ENST00000409531 CATSPER2Q96P56 530 aa15.57■□□□□ 0.08
TSPAN4-208ENST00000409531 TSSK3Q96PN8 268 aa15.57■□□□□ 0.08
TSPAN4-208ENST00000409531 UBL7Q96S82 380 aaPredicted RBP15.57■□□□□ 0.08
TSPAN4-208ENST00000409531 FAM117AQ9C073 453 aa15.57■□□□□ 0.08
TSPAN4-208ENST00000409531 SLC26A1Q9H2B4 701 aa15.57■□□□□ 0.08
TSPAN4-208ENST00000409531 AKIRIN1Q9H9L7 192 aaPredicted RBP15.57■□□□□ 0.08
TSPAN4-208ENST00000409531 C14orf105Q9NVL8 296 aa15.57■□□□□ 0.08
TSPAN4-208ENST00000409531 HEY2Q9UBP5 337 aa15.57■□□□□ 0.08
TSPAN4-208ENST00000409531 IL17BQ9UHF5 180 aa15.57■□□□□ 0.08
TSPAN4-208ENST00000409531 KCND3Q9UK17 655 aa15.57■□□□□ 0.08
TSPAN4-208ENST00000409531 CROTQ9UKG9 612 aa15.57■□□□□ 0.08
TSPAN4-208ENST00000409531 ATG4BQ9Y4P1 393 aa15.57■□□□□ 0.08
TSPAN4-208ENST00000409531 C1orf226A1L170 272 aa15.56■□□□□ 0.08
TSPAN4-208ENST00000409531 ZNF891A8MT65 544 aaPredicted RBP15.56■□□□□ 0.08
TSPAN4-208ENST00000409531 CLDN4O14493 209 aa15.56■□□□□ 0.08
TSPAN4-208ENST00000409531 TERTO14746 1132 aaKnown RBP15.56■□□□□ 0.08
TSPAN4-208ENST00000409531 CCDC22O60826 627 aa15.56■□□□□ 0.08
TSPAN4-208ENST00000409531 IL3P08700 152 aa15.56■□□□□ 0.08
TSPAN4-208ENST00000409531 NR2F6P10588 404 aa15.56■□□□□ 0.08
TSPAN4-208ENST00000409531 PRPS1L1P21108 318 aa15.56■□□□□ 0.08
TSPAN4-208ENST00000409531 F8A1P23610 371 aa15.56■□□□□ 0.08
TSPAN4-208ENST00000409531 TACR1P25103 407 aa15.56■□□□□ 0.08
TSPAN4-208ENST00000409531 HPCAL1P37235 193 aa15.56■□□□□ 0.08
TSPAN4-208ENST00000409531 MRPL19P49406 292 aaKnown RBP15.56■□□□□ 0.08
TSPAN4-208ENST00000409531 CLNS1AP54105 237 aaKnown RBP15.56■□□□□ 0.08
TSPAN4-208ENST00000409531 CLDN8P56748 225 aa15.56■□□□□ 0.08
TSPAN4-208ENST00000409531 MAT1AQ00266 395 aaKnown RBP15.56■□□□□ 0.08
TSPAN4-208ENST00000409531 SQLEQ14534 574 aa15.56■□□□□ 0.08
TSPAN4-208ENST00000409531 PDCD4Q53EL6 469 aaKnown RBP15.56■□□□□ 0.08
TSPAN4-208ENST00000409531 FAM71E1Q6IPT2 247 aa15.56■□□□□ 0.08
TSPAN4-208ENST00000409531 MED25Q71SY5 747 aa15.56■□□□□ 0.08
TSPAN4-208ENST00000409531 OVCH1Q7RTY7 1134 aa15.56■□□□□ 0.08
TSPAN4-208ENST00000409531 R3HCC1LQ7Z5L2 792 aaKnown RBP15.56■□□□□ 0.08
TSPAN4-208ENST00000409531 MIER2Q8N344 545 aa15.56■□□□□ 0.08
TSPAN4-208ENST00000409531 CCDC197Q8NCU1 140 aa15.56■□□□□ 0.08
TSPAN4-208ENST00000409531 PUM2Q8TB72 1066 aaKnown RBP eCLIP15.56■□□□□ 0.08
TSPAN4-208ENST00000409531 TBC1D20Q96BZ9 403 aa15.56■□□□□ 0.08
TSPAN4-208ENST00000409531 MTERF3Q96E29 417 aa15.56■□□□□ 0.08
TSPAN4-208ENST00000409531 PEX11GQ96HA9 241 aa15.56■□□□□ 0.08
TSPAN4-208ENST00000409531 PRPF18Q99633 342 aaKnown RBP15.56■□□□□ 0.08
TSPAN4-208ENST00000409531 GPR87Q9BY21 358 aa15.56■□□□□ 0.08
TSPAN4-208ENST00000409531 DPY30Q9C005 99 aa15.56■□□□□ 0.08
TSPAN4-208ENST00000409531 TGIF2Q9GZN2 237 aa15.56■□□□□ 0.08
TSPAN4-208ENST00000409531 SDR39U1Q9NRG7 319 aaPredicted RBP15.56■□□□□ 0.08
TSPAN4-208ENST00000409531 BAIAP2L1Q9UHR4 511 aa15.56■□□□□ 0.08
TSPAN4-208ENST00000409531 NXT1Q9UKK6 140 aaKnown RBP15.56■□□□□ 0.08
TSPAN4-208ENST00000409531 PSME2Q9UL46 239 aa15.56■□□□□ 0.08
TSPAN4-208ENST00000409531 G3BP2Q9UN86 482 aaKnown RBP15.56■□□□□ 0.08
TSPAN4-208ENST00000409531 GPR45Q9Y5Y3 372 aa15.56■□□□□ 0.08
TSPAN4-208ENST00000409531 LOC400499M0QZD8 3231 aa15.56■□□□□ 0.08
TSPAN4-208ENST00000409531 IGLV3-12A0A075B6K2 115 aa15.55■□□□□ 0.08
TSPAN4-208ENST00000409531 A0A1W2PR48 441 aa15.55■□□□□ 0.08
TSPAN4-208ENST00000409531 C21orf140B9A014 251 aa15.55■□□□□ 0.08
TSPAN4-208ENST00000409531 ERVH48-1M5A8F1 160 aa15.55■□□□□ 0.08
TSPAN4-208ENST00000409531 CYR61O00622 381 aa15.55■□□□□ 0.08
TSPAN4-208ENST00000409531 NKX2-8O15522 239 aa15.55■□□□□ 0.08
TSPAN4-208ENST00000409531 FHP07954 510 aa15.55■□□□□ 0.08
TSPAN4-208ENST00000409531 DDCP20711 480 aa15.55■□□□□ 0.08
TSPAN4-208ENST00000409531 PPP2R1BP30154 601 aa15.55■□□□□ 0.08
TSPAN4-208ENST00000409531 C21orf58P58505 322 aa15.55■□□□□ 0.08
TSPAN4-208ENST00000409531 CBX1P83916 185 aa15.55■□□□□ 0.08
TSPAN4-208ENST00000409531 MC1RQ01726 317 aa15.55■□□□□ 0.08
TSPAN4-208ENST00000409531 C2orf80Q0P641 193 aa15.55■□□□□ 0.08
TSPAN4-208ENST00000409531 PTGR1Q14914 329 aa15.55■□□□□ 0.08
TSPAN4-208ENST00000409531 SYT16Q17RD7 645 aa15.55■□□□□ 0.08
TSPAN4-208ENST00000409531 CRTC2Q53ET0 693 aaPredicted RBP15.55■□□□□ 0.08
TSPAN4-208ENST00000409531 OR52E8Q6IFG1 317 aa15.55■□□□□ 0.08
TSPAN4-208ENST00000409531 FAM199XQ6PEV8 388 aaPredicted RBP15.55■□□□□ 0.08
TSPAN4-208ENST00000409531 COX15Q7KZN9 410 aa15.55■□□□□ 0.08
TSPAN4-208ENST00000409531 CLNKQ7Z7G1 428 aa15.55■□□□□ 0.08
TSPAN4-208ENST00000409531 ZNF595Q8IYB9 648 aa15.55■□□□□ 0.08
TSPAN4-208ENST00000409531 FAM47BQ8NA70 645 aa15.55■□□□□ 0.08
TSPAN4-208ENST00000409531 LSM14AQ8ND56 463 aaKnown RBP15.55■□□□□ 0.08
TSPAN4-208ENST00000409531 C7orf57Q8NEG2 295 aa15.55■□□□□ 0.08
TSPAN4-208ENST00000409531 CT55Q8WUE5 264 aa15.55■□□□□ 0.08
TSPAN4-208ENST00000409531 TANKQ92844 425 aa15.55■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms