RNA–Protein interactions for RNA: ENST00000409141.5

PDLIM2-206, Transcript of PDZ and LIM domain 2, humanhuman

TSL 2 BASIC

Gene PDLIM2, Length 1,463 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-206ENST00000409141 DNAJB13P59910 316 aa16.77■□□□□ 0.28
PDLIM2-206ENST00000409141 ID2Q02363 134 aa16.77■□□□□ 0.28
PDLIM2-206ENST00000409141 SERTAD2Q14140 314 aa16.77■□□□□ 0.28
PDLIM2-206ENST00000409141 TERF2Q15554 542 aa16.77■□□□□ 0.28
PDLIM2-206ENST00000409141 PRR30Q53SZ7 412 aaPredicted RBP16.77■□□□□ 0.28
PDLIM2-206ENST00000409141 CFAP157Q5JU67 520 aa16.77■□□□□ 0.28
PDLIM2-206ENST00000409141 FAM219BQ5XKK7 198 aa16.77■□□□□ 0.28
PDLIM2-206ENST00000409141 C18orf63Q68DL7 685 aa16.77■□□□□ 0.28
PDLIM2-206ENST00000409141 MRM1Q6IN84 353 aaKnown RBP16.77■□□□□ 0.28
PDLIM2-206ENST00000409141 CRLF3Q8IUI8 442 aa16.77■□□□□ 0.28
PDLIM2-206ENST00000409141 OR4N5Q8IXE1 308 aa16.77■□□□□ 0.28
PDLIM2-206ENST00000409141 BANPQ8N9N5 519 aa16.77■□□□□ 0.28
PDLIM2-206ENST00000409141 B3GNT7Q8NFL0 401 aa16.77■□□□□ 0.28
PDLIM2-206ENST00000409141 TMEM109Q9BVC6 243 aa16.77■□□□□ 0.28
PDLIM2-206ENST00000409141 DEFB126Q9BYW3 111 aa16.77■□□□□ 0.28
PDLIM2-206ENST00000409141 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP16.77■□□□□ 0.28
PDLIM2-206ENST00000409141 BRF2Q9HAW0 419 aa16.77■□□□□ 0.28
PDLIM2-206ENST00000409141 MID1IP1Q9NPA3 183 aa16.77■□□□□ 0.28
PDLIM2-206ENST00000409141 ADAP2Q9NPF8 381 aa16.77■□□□□ 0.28
PDLIM2-206ENST00000409141 OXSMQ9NWU1 459 aa16.77■□□□□ 0.28
PDLIM2-206ENST00000409141 NMRK1Q9NWW6 199 aa16.77■□□□□ 0.28
PDLIM2-206ENST00000409141 ABI3Q9P2A4 366 aa16.77■□□□□ 0.28
PDLIM2-206ENST00000409141 VTI1BQ9UEU0 232 aa16.77■□□□□ 0.28
PDLIM2-206ENST00000409141 MID2Q9UJV3 735 aa16.77■□□□□ 0.28
PDLIM2-206ENST00000409141 ASB4Q9Y574 426 aa16.77■□□□□ 0.28
PDLIM2-206ENST00000409141 PCDHGA10Q9Y5H3 936 aa16.77■□□□□ 0.28
PDLIM2-206ENST00000409141 CLCA3PQ9Y6N3 262 aa16.77■□□□□ 0.28
PDLIM2-206ENST00000409141 PRRC2CQ9Y520 2896 aaKnown RBP16.76■□□□□ 0.27
PDLIM2-206ENST00000409141 ULK1O75385 1050 aa16.76■□□□□ 0.27
PDLIM2-206ENST00000409141 KLK1P06870 262 aa16.76■□□□□ 0.27
PDLIM2-206ENST00000409141 TNFSF10P50591 281 aa16.76■□□□□ 0.27
PDLIM2-206ENST00000409141 NAA20P61599 178 aa16.76■□□□□ 0.27
PDLIM2-206ENST00000409141 TNFRSF17Q02223 184 aa16.76■□□□□ 0.27
PDLIM2-206ENST00000409141 ELAVL1Q15717 326 aaKnown RBP16.76■□□□□ 0.27
PDLIM2-206ENST00000409141 TCHHL1Q5QJ38 904 aaPredicted RBP16.76■□□□□ 0.27
PDLIM2-206ENST00000409141 PAGE2Q7Z2X7 111 aa16.76■□□□□ 0.27
PDLIM2-206ENST00000409141 ATCAYQ86WG3 371 aa16.76■□□□□ 0.27
PDLIM2-206ENST00000409141 RPS19BP1Q86WX3 136 aaKnown RBP16.76■□□□□ 0.27
PDLIM2-206ENST00000409141 BEST3Q8N1M1 668 aa16.76■□□□□ 0.27
PDLIM2-206ENST00000409141 METTL4Q8N3J2 472 aa16.76■□□□□ 0.27
PDLIM2-206ENST00000409141 TMEM132CQ8N3T6 1108 aa16.76■□□□□ 0.27
PDLIM2-206ENST00000409141 C7orf57Q8NEG2 295 aa16.76■□□□□ 0.27
PDLIM2-206ENST00000409141 TANKQ92844 425 aa16.76■□□□□ 0.27
PDLIM2-206ENST00000409141 ANKRD9Q96BM1 317 aaPredicted RBP16.76■□□□□ 0.27
PDLIM2-206ENST00000409141 SNRNP40Q96DI7 357 aaKnown RBP16.76■□□□□ 0.27
PDLIM2-206ENST00000409141 C19orf60Q96EN9 201 aa16.76■□□□□ 0.27
PDLIM2-206ENST00000409141 APOPT1Q96IL0 206 aa16.76■□□□□ 0.27
PDLIM2-206ENST00000409141 RNF32Q9H0A6 362 aa16.76■□□□□ 0.27
PDLIM2-206ENST00000409141 CDCP1Q9H5V8 836 aa16.76■□□□□ 0.27
PDLIM2-206ENST00000409141 WDR41Q9HAD4 459 aa16.76■□□□□ 0.27
PDLIM2-206ENST00000409141 MKS1Q9NXB0 559 aa16.76■□□□□ 0.27
PDLIM2-206ENST00000409141 ADAM29Q9UKF5 820 aa16.76■□□□□ 0.27
PDLIM2-206ENST00000409141 PLLPQ9Y342 182 aa16.76■□□□□ 0.27
PDLIM2-206ENST00000409141 COPG1Q9Y678 874 aaKnown RBP16.76■□□□□ 0.27
PDLIM2-206ENST00000409141 TRAV17A0A0B4J275 112 aa16.75■□□□□ 0.27
PDLIM2-206ENST00000409141 ARHGAP10A1A4S6 786 aa16.75■□□□□ 0.27
PDLIM2-206ENST00000409141 CCDC151A5D8V7 595 aa16.75■□□□□ 0.27
PDLIM2-206ENST00000409141 FGF17O60258 216 aa16.75■□□□□ 0.27
PDLIM2-206ENST00000409141 PRKRAO75569 313 aaKnown RBP16.75■□□□□ 0.27
PDLIM2-206ENST00000409141 ESRRBO95718 433 aa16.75■□□□□ 0.27
PDLIM2-206ENST00000409141 ENO1P06733 434 aaKnown RBP16.75■□□□□ 0.27
PDLIM2-206ENST00000409141 CLCN2P51788 898 aa16.75■□□□□ 0.27
PDLIM2-206ENST00000409141 CCNYL2Q5T2Q4 361 aa16.75■□□□□ 0.27
PDLIM2-206ENST00000409141 APCDD1LQ8NCL9 501 aa16.75■□□□□ 0.27
PDLIM2-206ENST00000409141 DAZLQ92904 295 aaKnown RBP16.75■□□□□ 0.27
PDLIM2-206ENST00000409141 NCLNQ969V3 563 aa16.75■□□□□ 0.27
PDLIM2-206ENST00000409141 HBEGFQ99075 208 aa16.75■□□□□ 0.27
PDLIM2-206ENST00000409141 NPAS2Q99743 824 aa16.75■□□□□ 0.27
PDLIM2-206ENST00000409141 VPS29Q9UBQ0 182 aa16.75■□□□□ 0.27
PDLIM2-206ENST00000409141 A0A1W2PR48 441 aa16.74■□□□□ 0.27
PDLIM2-206ENST00000409141 OR5H15A6NDH6 313 aa16.74■□□□□ 0.27
PDLIM2-206ENST00000409141 GLOD5A6NK44 160 aa16.74■□□□□ 0.27
PDLIM2-206ENST00000409141 UBFD1O14562 309 aaKnown RBP16.74■□□□□ 0.27
PDLIM2-206ENST00000409141 MAN1A2O60476 641 aa16.74■□□□□ 0.27
PDLIM2-206ENST00000409141 VPS4BO75351 444 aa16.74■□□□□ 0.27
PDLIM2-206ENST00000409141 SPAG7O75391 227 aa16.74■□□□□ 0.27
PDLIM2-206ENST00000409141 NR2F6P10588 404 aa16.74■□□□□ 0.27
PDLIM2-206ENST00000409141 TPP2P29144 1249 aaPredicted RBP16.74■□□□□ 0.27
PDLIM2-206ENST00000409141 BIKQ13323 160 aa16.74■□□□□ 0.27
PDLIM2-206ENST00000409141 KRT71Q3SY84 523 aa16.74■□□□□ 0.27
PDLIM2-206ENST00000409141 LIPMQ5VYY2 423 aa16.74■□□□□ 0.27
PDLIM2-206ENST00000409141 FRMD7Q6ZUT3 714 aa16.74■□□□□ 0.27
PDLIM2-206ENST00000409141 COMMD6Q7Z4G1 85 aa16.74■□□□□ 0.27
PDLIM2-206ENST00000409141 SUN3Q8TAQ9 357 aa16.74■□□□□ 0.27
PDLIM2-206ENST00000409141 AGAP11Q8TF27 550 aa16.74■□□□□ 0.27
PDLIM2-206ENST00000409141 PTPMT1Q8WUK0 201 aaPredicted RBP16.74■□□□□ 0.27
PDLIM2-206ENST00000409141 VMP1Q96GC9 406 aa16.74■□□□□ 0.27
PDLIM2-206ENST00000409141 KCNA7Q96RP8 456 aa16.74■□□□□ 0.27
PDLIM2-206ENST00000409141 SMC6Q96SB8 1091 aa16.74■□□□□ 0.27
PDLIM2-206ENST00000409141 UTP23Q9BRU9 249 aaKnown RBP16.74■□□□□ 0.27
PDLIM2-206ENST00000409141 ASF1BQ9NVP2 202 aa16.74■□□□□ 0.27
PDLIM2-206ENST00000409141 VPS4AQ9UN37 437 aa16.74■□□□□ 0.27
PDLIM2-206ENST00000409141 PPIEQ9UNP9 301 aaKnown RBP16.74■□□□□ 0.27
PDLIM2-206ENST00000409141 TIMM22Q9Y584 194 aa16.74■□□□□ 0.27
PDLIM2-206ENST00000409141 TRBV11-1A0A0K0K1C0 115 aa16.73■□□□□ 0.27
PDLIM2-206ENST00000409141 WASHC1A8K0Z3 465 aa16.73■□□□□ 0.27
PDLIM2-206ENST00000409141 GABRR3A8MPY1 467 aa16.73■□□□□ 0.27
PDLIM2-206ENST00000409141 C17orf105B2RV13 164 aa16.73■□□□□ 0.27
PDLIM2-206ENST00000409141 HSD3B1P14060 373 aa16.73■□□□□ 0.27
PDLIM2-206ENST00000409141 COX7A2P14406 83 aa16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms