RNA–Protein interactions for RNA: ENST00000406503.1

PRAME-206, Transcript of preferentially expressed antigen in melanoma, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PRAME, Length 740 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAME-206ENST00000406503 ZNF585AQ6P3V2 769 aa11.9□□□□□ -0.5
PRAME-206ENST00000406503 PAOXQ6QHF9 649 aa11.9□□□□□ -0.5
PRAME-206ENST00000406503 B3GNT6Q6ZMB0 384 aa11.9□□□□□ -0.5
PRAME-206ENST00000406503 RTL4Q6ZR62 310 aa11.9□□□□□ -0.5
PRAME-206ENST00000406503 SEM1Q6ZVN7 128 aa11.9□□□□□ -0.5
PRAME-206ENST00000406503 FRA10AC1Q70Z53 315 aa11.9□□□□□ -0.5
PRAME-206ENST00000406503 TMEM200AQ86VY9 491 aa11.9□□□□□ -0.5
PRAME-206ENST00000406503 KRT78Q8N1N4 520 aa11.9□□□□□ -0.5
PRAME-206ENST00000406503 GOLM1Q8NBJ4 401 aa11.9□□□□□ -0.5
PRAME-206ENST00000406503 FBXO36Q8NEA4 188 aa11.9□□□□□ -0.5
PRAME-206ENST00000406503 OR8K3Q8NH51 312 aa11.9□□□□□ -0.5
PRAME-206ENST00000406503 OR14A16Q8NHC5 309 aa11.9□□□□□ -0.5
PRAME-206ENST00000406503 DAZLQ92904 295 aaKnown RBP11.9□□□□□ -0.5
PRAME-206ENST00000406503 VPS39Q96JC1 886 aa11.9□□□□□ -0.5
PRAME-206ENST00000406503 FAM173AQ9BQD7 235 aa11.9□□□□□ -0.5
PRAME-206ENST00000406503 CNPPD1Q9BV87 410 aa11.9□□□□□ -0.5
PRAME-206ENST00000406503 MS4A8Q9BY19 250 aa11.9□□□□□ -0.5
PRAME-206ENST00000406503 PITHD1Q9GZP4 211 aaPredicted RBP11.9□□□□□ -0.5
PRAME-206ENST00000406503 LIME1Q9H400 295 aa11.9□□□□□ -0.5
PRAME-206ENST00000406503 RHOJQ9H4E5 214 aa11.9□□□□□ -0.5
PRAME-206ENST00000406503 POPDC3Q9HBV1 291 aa11.9□□□□□ -0.5
PRAME-206ENST00000406503 ZNF358Q9NW07 568 aa11.9□□□□□ -0.5
PRAME-206ENST00000406503 TRMT1Q9NXH9 659 aaKnown RBP11.9□□□□□ -0.5
PRAME-206ENST00000406503 MRPS33Q9Y291 106 aaKnown RBP11.9□□□□□ -0.5
PRAME-206ENST00000406503 CLCA3PQ9Y6N3 262 aa11.9□□□□□ -0.5
PRAME-206ENST00000406503 FAM221AA4D161 298 aa11.89□□□□□ -0.51
PRAME-206ENST00000406503 ANKDD1BA6NHY2 528 aa11.89□□□□□ -0.51
PRAME-206ENST00000406503 CXorf49A8MYA2 514 aaPredicted RBP11.89□□□□□ -0.51
PRAME-206ENST00000406503 KDM4EB2RXH2 506 aaPredicted RBP11.89□□□□□ -0.51
PRAME-206ENST00000406503 BCKDKO14874 412 aa11.89□□□□□ -0.51
PRAME-206ENST00000406503 FGF17O60258 216 aa11.89□□□□□ -0.51
PRAME-206ENST00000406503 H2AFYO75367 372 aaKnown RBP11.89□□□□□ -0.51
PRAME-206ENST00000406503 SEC31AO94979 1220 aaKnown RBP11.89□□□□□ -0.51
PRAME-206ENST00000406503 SCELO95171 688 aa11.89□□□□□ -0.51
PRAME-206ENST00000406503 C1QAP02745 245 aa11.89□□□□□ -0.51
PRAME-206ENST00000406503 IGKV3-11P04433 115 aa11.89□□□□□ -0.51
PRAME-206ENST00000406503 RFPL3SP0C7P2 107 aa11.89□□□□□ -0.51
PRAME-206ENST00000406503 ZFP36L2P47974 494 aaKnown RBP11.89□□□□□ -0.51
PRAME-206ENST00000406503 KCNC1P48547 511 aa11.89□□□□□ -0.51
PRAME-206ENST00000406503 IGLV3-21P80748 117 aaPredicted RBP11.89□□□□□ -0.51
PRAME-206ENST00000406503 CBLBQ13191 982 aa11.89□□□□□ -0.51
PRAME-206ENST00000406503 ZNF791Q3KP31 576 aaPredicted RBP11.89□□□□□ -0.51
PRAME-206ENST00000406503 GK5Q6ZS86 529 aa11.89□□□□□ -0.51
PRAME-206ENST00000406503 FAM47EQ6ZV65 393 aa11.89□□□□□ -0.51
PRAME-206ENST00000406503 C9orf40Q8IXQ3 194 aa11.89□□□□□ -0.51
PRAME-206ENST00000406503 PDPRQ8NCN5 879 aa11.89□□□□□ -0.51
PRAME-206ENST00000406503 ZNF473Q8WTR7 871 aaKnown RBP11.89□□□□□ -0.51
PRAME-206ENST00000406503 PTCD3Q96EY7 689 aaKnown RBP11.89□□□□□ -0.51
PRAME-206ENST00000406503 ZNF703Q9H7S9 590 aaPredicted RBP11.89□□□□□ -0.51
PRAME-206ENST00000406503 LYRM4Q9HD34 91 aa11.89□□□□□ -0.51
PRAME-206ENST00000406503 IGSF5Q9NSI5 407 aa11.89□□□□□ -0.51
PRAME-206ENST00000406503 DNAJC11Q9NVH1 559 aa11.89□□□□□ -0.51
PRAME-206ENST00000406503 MTO1Q9Y2Z2 717 aaKnown RBP11.89□□□□□ -0.51
PRAME-206ENST00000406503 ANK3Q12955 4377 aaKnown RBP11.89□□□□□ -0.51
PRAME-206ENST00000406503 A0A088AWK7 358 aa11.88□□□□□ -0.51
PRAME-206ENST00000406503 ATP6AP2A0A1C7CYW4 349 aa11.88□□□□□ -0.51
PRAME-206ENST00000406503 SYNDIG1LA6NDD5 238 aa11.88□□□□□ -0.51
PRAME-206ENST00000406503 LRRC3CA6NJW4 275 aa11.88□□□□□ -0.51
PRAME-206ENST00000406503 FIGNL2A6NMB9 653 aa11.88□□□□□ -0.51
PRAME-206ENST00000406503 PHGDHO43175 533 aaKnown RBP11.88□□□□□ -0.51
PRAME-206ENST00000406503 SUSD5O60279 629 aa11.88□□□□□ -0.51
PRAME-206ENST00000406503 CTAG2O75638 210 aa11.88□□□□□ -0.51
PRAME-206ENST00000406503 ATP6AP2O75787 350 aa11.88□□□□□ -0.51
PRAME-206ENST00000406503 CD1DP15813 335 aa11.88□□□□□ -0.51
PRAME-206ENST00000406503 HOXB4P17483 251 aaPredicted RBP11.88□□□□□ -0.51
PRAME-206ENST00000406503 ZNF10P21506 573 aaPredicted RBP11.88□□□□□ -0.51
PRAME-206ENST00000406503 ATP5A1P25705 553 aaKnown RBP11.88□□□□□ -0.51
PRAME-206ENST00000406503 PIGAP37287 484 aa11.88□□□□□ -0.51
PRAME-206ENST00000406503 ARL4CP56559 192 aa11.88□□□□□ -0.51
PRAME-206ENST00000406503 ASPHQ12797 758 aa11.88□□□□□ -0.51
PRAME-206ENST00000406503 PDIA2Q13087 525 aaKnown RBP11.88□□□□□ -0.51
PRAME-206ENST00000406503 MYBPHQ13203 477 aa11.88□□□□□ -0.51
PRAME-206ENST00000406503 EFTUD2Q15029 972 aaKnown RBP eCLIP11.88□□□□□ -0.511e-10■■■□□ 18.2
PRAME-206ENST00000406503 MPEG1Q2M385 716 aa11.88□□□□□ -0.51
PRAME-206ENST00000406503 PIGGQ5H8A4 983 aa11.88□□□□□ -0.51
PRAME-206ENST00000406503 C1orf185Q5T7R7 199 aa11.88□□□□□ -0.51
PRAME-206ENST00000406503 CES4AQ5XG92 561 aa11.88□□□□□ -0.51
PRAME-206ENST00000406503 RNF175Q8N4F7 328 aa11.88□□□□□ -0.51
PRAME-206ENST00000406503 ACOT4Q8N9L9 421 aa11.88□□□□□ -0.51
PRAME-206ENST00000406503 RELL2Q8NC24 303 aaPredicted RBP11.88□□□□□ -0.51
PRAME-206ENST00000406503 SGCZQ96LD1 299 aa11.88□□□□□ -0.51
PRAME-206ENST00000406503 KCNC2Q96PR1 638 aa11.88□□□□□ -0.51
PRAME-206ENST00000406503 SORBS1Q9BX66 1292 aaKnown RBP11.88□□□□□ -0.51
PRAME-206ENST00000406503 SACM1LQ9NTJ5 587 aa11.88□□□□□ -0.51
PRAME-206ENST00000406503 WWOXQ9NZC7 414 aa11.88□□□□□ -0.51
PRAME-206ENST00000406503 PTBP2Q9UKA9 531 aaKnown RBP11.88□□□□□ -0.51
PRAME-206ENST00000406503 PCNX3Q9H6A9 2034 aa11.87□□□□□ -0.51
PRAME-206ENST00000406503 WDR1O75083 606 aa11.87□□□□□ -0.51
PRAME-206ENST00000406503 SH3BGRLO75368 114 aa11.87□□□□□ -0.51
PRAME-206ENST00000406503 PRKRAO75569 313 aaKnown RBP11.87□□□□□ -0.51
PRAME-206ENST00000406503 STK16O75716 305 aa11.87□□□□□ -0.51
PRAME-206ENST00000406503 CCDC166P0CW27 439 aa11.87□□□□□ -0.51
PRAME-206ENST00000406503 HIST1H1TP22492 207 aaPredicted RBP11.87□□□□□ -0.51
PRAME-206ENST00000406503 CASP2P42575 452 aa11.87□□□□□ -0.51
PRAME-206ENST00000406503 MAN2A2P49641 1150 aa11.87□□□□□ -0.51
PRAME-206ENST00000406503 STX4Q12846 297 aa11.87□□□□□ -0.51
PRAME-206ENST00000406503 DLG1Q12959 904 aa11.87□□□□□ -0.51
PRAME-206ENST00000406503 SERTAD2Q14140 314 aa11.87□□□□□ -0.51
PRAME-206ENST00000406503 ZKSCAN8Q15776 578 aaPredicted RBP11.87□□□□□ -0.51
PRAME-206ENST00000406503 PDK4Q16654 411 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms