RNA–Protein interactions for RNA: ENST00000406327.2

HMGB3P18-201, Transcript of high mobility group box 3 pseudogene 18, humanhuman

BASIC

Gene HMGB3P18, Length 590 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P18-201ENST00000406327 RBMS3Q6XE24 437 aaKnown RBP4.24□□□□□ -1.73
HMGB3P18-201ENST00000406327 CYP4V2Q6ZWL3 525 aaPredicted RBP4.24□□□□□ -1.73
HMGB3P18-201ENST00000406327 COPS6Q7L5N1 327 aa4.24□□□□□ -1.73
HMGB3P18-201ENST00000406327 NLRP14Q86W24 1093 aa4.24□□□□□ -1.73
HMGB3P18-201ENST00000406327 ZDHHC17Q8IUH5 632 aa4.24□□□□□ -1.73
HMGB3P18-201ENST00000406327 UNC5CLQ8IV45 518 aa4.24□□□□□ -1.73
HMGB3P18-201ENST00000406327 STHQ8IWL8 128 aa4.24□□□□□ -1.73
HMGB3P18-201ENST00000406327 ELMOD2Q8IZ81 293 aa4.24□□□□□ -1.73
HMGB3P18-201ENST00000406327 SAMD14Q8IZD0 417 aaPredicted RBP4.24□□□□□ -1.73
HMGB3P18-201ENST00000406327 TTC5Q8N0Z6 440 aa4.24□□□□□ -1.73
HMGB3P18-201ENST00000406327 LSMEM2Q8N112 164 aa4.24□□□□□ -1.73
HMGB3P18-201ENST00000406327 KLHDC9Q8NEP7 349 aa4.24□□□□□ -1.73
HMGB3P18-201ENST00000406327 OR52E1Q8NGJ3 308 aa4.24□□□□□ -1.73
HMGB3P18-201ENST00000406327 OR4A16Q8NH70 328 aa4.24□□□□□ -1.73
HMGB3P18-201ENST00000406327 ZNRF4Q8WWF5 429 aa4.24□□□□□ -1.73
HMGB3P18-201ENST00000406327 IL12RB2Q99665 862 aa4.24□□□□□ -1.73
HMGB3P18-201ENST00000406327 MTIF3Q9H2K0 278 aaKnown RBP4.24□□□□□ -1.73
HMGB3P18-201ENST00000406327 SPASTQ9UBP0 616 aa4.24□□□□□ -1.73
HMGB3P18-201ENST00000406327 DNPEPQ9ULA0 475 aa4.24□□□□□ -1.73
HMGB3P18-201ENST00000406327 SATB2Q9UPW6 733 aa4.24□□□□□ -1.73
HMGB3P18-201ENST00000406327 USP16Q9Y5T5 823 aa4.24□□□□□ -1.73
HMGB3P18-201ENST00000406327 PHRF1Q9P1Y6 1649 aaKnown RBP4.24□□□□□ -1.73
HMGB3P18-201ENST00000406327 UMODL1Q5DID0 1318 aa4.23□□□□□ -1.73
HMGB3P18-201ENST00000406327 TTC41PQ6P2S7 1318 aa4.23□□□□□ -1.73
HMGB3P18-201ENST00000406327 KDM6AO15550 1401 aaPredicted RBP4.23□□□□□ -1.73
HMGB3P18-201ENST00000406327 A0A087WUV0 522 aaPredicted RBP4.23□□□□□ -1.73
HMGB3P18-201ENST00000406327 ERVV-2B6SEH9 535 aa4.23□□□□□ -1.73
HMGB3P18-201ENST00000406327 SLC1A7O00341 560 aa4.23□□□□□ -1.73
HMGB3P18-201ENST00000406327 EEF2KO00418 725 aaKnown RBP4.23□□□□□ -1.73
HMGB3P18-201ENST00000406327 FPGTO14772 594 aa4.23□□□□□ -1.73
HMGB3P18-201ENST00000406327 CPLX1O14810 134 aa4.23□□□□□ -1.73
HMGB3P18-201ENST00000406327 GMNNO75496 209 aa4.23□□□□□ -1.73
HMGB3P18-201ENST00000406327 MT-ND2P03891 347 aa4.23□□□□□ -1.73
HMGB3P18-201ENST00000406327 VTNP04004 478 aa4.23□□□□□ -1.73
HMGB3P18-201ENST00000406327 GHRP10912 638 aa4.23□□□□□ -1.73
HMGB3P18-201ENST00000406327 ALDH3B1P43353 468 aa4.23□□□□□ -1.73
HMGB3P18-201ENST00000406327 RABIFP47224 123 aa4.23□□□□□ -1.73
HMGB3P18-201ENST00000406327 TNFSF10P50591 281 aa4.23□□□□□ -1.73
HMGB3P18-201ENST00000406327 FOXG1P55316 489 aaPredicted RBP4.23□□□□□ -1.73
HMGB3P18-201ENST00000406327 NUCB2P80303 420 aa4.23□□□□□ -1.73
HMGB3P18-201ENST00000406327 GABPAQ06546 454 aa4.23□□□□□ -1.73
HMGB3P18-201ENST00000406327 CEACAM7Q14002 265 aa4.23□□□□□ -1.73
HMGB3P18-201ENST00000406327 GK2Q14410 553 aaPredicted RBP4.23□□□□□ -1.73
HMGB3P18-201ENST00000406327 P2RY6Q15077 328 aa4.23□□□□□ -1.73
HMGB3P18-201ENST00000406327 TEAD2Q15562 447 aa4.23□□□□□ -1.73
HMGB3P18-201ENST00000406327 ZNF74Q16587 644 aa4.23□□□□□ -1.73
HMGB3P18-201ENST00000406327 KIAA1644Q3SXP7 199 aa4.23□□□□□ -1.73
HMGB3P18-201ENST00000406327 FASTKD1Q53R41 847 aaKnown RBP4.23□□□□□ -1.73
HMGB3P18-201ENST00000406327 DNAJC21Q5F1R6 531 aaKnown RBP4.23□□□□□ -1.73
HMGB3P18-201ENST00000406327 ARHGEF16Q5VV41 709 aa4.23□□□□□ -1.73
HMGB3P18-201ENST00000406327 SNRNP48Q6IEG0 339 aaKnown RBP4.23□□□□□ -1.73
HMGB3P18-201ENST00000406327 C19orf48Q6RUI8 117 aa4.23□□□□□ -1.73
HMGB3P18-201ENST00000406327 TMEM207Q6UWW9 146 aa4.23□□□□□ -1.73
HMGB3P18-201ENST00000406327 TRMT11Q7Z4G4 463 aaKnown RBP4.23□□□□□ -1.73
HMGB3P18-201ENST00000406327 TRPT1Q86TN4 253 aaKnown RBP4.23□□□□□ -1.73
HMGB3P18-201ENST00000406327 ARL6IP6Q8N6S5 226 aa4.23□□□□□ -1.73
HMGB3P18-201ENST00000406327 CNBD1Q8NA66 436 aa4.23□□□□□ -1.73
HMGB3P18-201ENST00000406327 KBTBD8Q8NFY9 601 aa4.23□□□□□ -1.73
HMGB3P18-201ENST00000406327 OR1L3Q8NH93 324 aa4.23□□□□□ -1.73
HMGB3P18-201ENST00000406327 CHURC1Q8WUH1 139 aa4.23□□□□□ -1.73
HMGB3P18-201ENST00000406327 HPSE2Q8WWQ2 592 aa4.23□□□□□ -1.73
HMGB3P18-201ENST00000406327 ZBTB9Q96C00 473 aa4.23□□□□□ -1.73
HMGB3P18-201ENST00000406327 SPATA13Q96N96 652 aa4.23□□□□□ -1.73
HMGB3P18-201ENST00000406327 PCDHB18PQ96TA0 734 aa4.23□□□□□ -1.73
HMGB3P18-201ENST00000406327 EPYCQ99645 322 aa4.23□□□□□ -1.73
HMGB3P18-201ENST00000406327 CCM2Q9BSQ5 444 aa4.23□□□□□ -1.73
HMGB3P18-201ENST00000406327 TDRD1Q9BXT4 1180 aaKnown RBP4.23□□□□□ -1.73
HMGB3P18-201ENST00000406327 FTHL17Q9BXU8 183 aa4.23□□□□□ -1.73
HMGB3P18-201ENST00000406327 THAP2Q9H0W7 228 aa4.23□□□□□ -1.73
HMGB3P18-201ENST00000406327 GANQ9H2C0 597 aa4.23□□□□□ -1.73
HMGB3P18-201ENST00000406327 DCLRE1BQ9H816 532 aa4.23□□□□□ -1.73
HMGB3P18-201ENST00000406327 ZNF334Q9HCZ1 680 aaPredicted RBP4.23□□□□□ -1.73
HMGB3P18-201ENST00000406327 SIX2Q9NPC8 291 aa4.23□□□□□ -1.73
HMGB3P18-201ENST00000406327 ZFP57Q9NU63 452 aa4.23□□□□□ -1.73
HMGB3P18-201ENST00000406327 INTS9Q9NV88 658 aaKnown RBP4.23□□□□□ -1.73
HMGB3P18-201ENST00000406327 HACD3Q9P035 362 aa4.23□□□□□ -1.73
HMGB3P18-201ENST00000406327 NARFQ9UHQ1 456 aa4.23□□□□□ -1.73
HMGB3P18-201ENST00000406327 AURKCQ9UQB9 309 aa4.23□□□□□ -1.73
HMGB3P18-201ENST00000406327 CLCA3PQ9Y6N3 262 aa4.23□□□□□ -1.73
HMGB3P18-201ENST00000406327 CACNA1IQ9P0X4 2223 aa4.23□□□□□ -1.73
HMGB3P18-201ENST00000406327 MEGF6O75095 1541 aa4.22□□□□□ -1.73
HMGB3P18-201ENST00000406327 TRPM3Q9HCF6 1732 aaPredicted RBP4.22□□□□□ -1.73
HMGB3P18-201ENST00000406327 A0A1B0GUV1 79 aa4.22□□□□□ -1.73
HMGB3P18-201ENST00000406327 TCP10L2B9ZVM9 353 aa4.22□□□□□ -1.73
HMGB3P18-201ENST00000406327 SLCO1B7G3V0H7 640 aa4.22□□□□□ -1.73
HMGB3P18-201ENST00000406327 P2RY10O00398 339 aa4.22□□□□□ -1.73
HMGB3P18-201ENST00000406327 CCSO14618 274 aa4.22□□□□□ -1.73
HMGB3P18-201ENST00000406327 SLC22A2O15244 555 aa4.22□□□□□ -1.73
HMGB3P18-201ENST00000406327 OGTO15294 1046 aa4.22□□□□□ -1.73
HMGB3P18-201ENST00000406327 EML2O95834 649 aa4.22□□□□□ -1.73
HMGB3P18-201ENST00000406327 PAK4O96013 591 aaPredicted RBP4.22□□□□□ -1.73
HMGB3P18-201ENST00000406327 CT45A8P0DMV1 189 aa4.22□□□□□ -1.73
HMGB3P18-201ENST00000406327 CT45A9P0DMV2 189 aa4.22□□□□□ -1.73
HMGB3P18-201ENST00000406327 KRT5P13647 590 aa4.22□□□□□ -1.73
HMGB3P18-201ENST00000406327 RPL35AP18077 110 aaKnown RBP4.22□□□□□ -1.73
HMGB3P18-201ENST00000406327 ITGB6P18564 788 aa4.22□□□□□ -1.73
HMGB3P18-201ENST00000406327 KIF5BP33176 963 aa4.22□□□□□ -1.73
HMGB3P18-201ENST00000406327 LBX1P52954 281 aa4.22□□□□□ -1.73
HMGB3P18-201ENST00000406327 PHEXP78562 749 aa4.22□□□□□ -1.73
HMGB3P18-201ENST00000406327 SP3Q02447 781 aa4.22□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms