RNA–Protein interactions for RNA: ENST00000406134.5

MSH2-202, Transcript of mutS homolog 2, humanhuman

TSL 1 (best) BASIC

Gene MSH2, Length 3,628 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-202ENST00000406134 A4GALTQ9NPC4 353 aa9.37□□□□□ -0.91
MSH2-202ENST00000406134 MAN2C1Q9NTJ4 1040 aa9.37□□□□□ -0.91
MSH2-202ENST00000406134 CUEDC1Q9NWM3 386 aaPredicted RBP9.37□□□□□ -0.91
MSH2-202ENST00000406134 CLEC2DQ9UHP7 191 aa9.37□□□□□ -0.91
MSH2-202ENST00000406134 TRBC2A0A5B9 178 aa9.36□□□□□ -0.91
MSH2-202ENST00000406134 TAF4O00268 1085 aa9.36□□□□□ -0.91
MSH2-202ENST00000406134 CCL5P13501 91 aa9.36□□□□□ -0.91
MSH2-202ENST00000406134 CEBPBP17676 345 aa9.36□□□□□ -0.91
MSH2-202ENST00000406134 ENDOUP21128 410 aaKnown RBP9.36□□□□□ -0.91
MSH2-202ENST00000406134 WEE1P30291 646 aa9.36□□□□□ -0.91
MSH2-202ENST00000406134 UGT2B15P54855 530 aa9.36□□□□□ -0.91
MSH2-202ENST00000406134 CYP4F2P78329 520 aa9.36□□□□□ -0.91
MSH2-202ENST00000406134 ZNF630Q2M218 657 aaPredicted RBP9.36□□□□□ -0.91
MSH2-202ENST00000406134 ZNF284Q2VY69 593 aa9.36□□□□□ -0.91
MSH2-202ENST00000406134 TMEM201Q5SNT2 666 aa9.36□□□□□ -0.91
MSH2-202ENST00000406134 CCDC149Q6ZUS6 474 aa9.36□□□□□ -0.91
MSH2-202ENST00000406134 NANOGNBQ7Z5D8 188 aa9.36□□□□□ -0.91
MSH2-202ENST00000406134 C2orf73Q8N5S3 287 aaPredicted RBP9.36□□□□□ -0.91
MSH2-202ENST00000406134 CHAC2Q8WUX2 184 aa9.36□□□□□ -0.91
MSH2-202ENST00000406134 GPA33Q99795 319 aa9.36□□□□□ -0.91
MSH2-202ENST00000406134 RHBGQ9H310 441 aa9.36□□□□□ -0.91
MSH2-202ENST00000406134 TM7SF3Q9NS93 570 aa9.36□□□□□ -0.91
MSH2-202ENST00000406134 HCN4Q9Y3Q4 1203 aa9.36□□□□□ -0.91
MSH2-202ENST00000406134 PRKAB1Q9Y478 270 aa9.36□□□□□ -0.91
MSH2-202ENST00000406134 TRIM17Q9Y577 477 aa9.36□□□□□ -0.91
MSH2-202ENST00000406134 KLK4Q9Y5K2 254 aa9.36□□□□□ -0.91
MSH2-202ENST00000406134 A0A1W2PRB8 838 aa9.36□□□□□ -0.91
MSH2-202ENST00000406134 H3BQ06 376 aaPredicted RBP9.36□□□□□ -0.91
MSH2-202ENST00000406134 RPLP0P05388 317 aaKnown RBP9.36□□□□□ -0.91
MSH2-202ENST00000406134 SRPRAP08240 638 aaKnown RBP9.36□□□□□ -0.91
MSH2-202ENST00000406134 C6P13671 934 aa9.36□□□□□ -0.91
MSH2-202ENST00000406134 RHCEP18577 417 aa9.36□□□□□ -0.91
MSH2-202ENST00000406134 PSMB5P28074 263 aa9.36□□□□□ -0.91
MSH2-202ENST00000406134 DEFB115Q30KQ5 88 aa9.36□□□□□ -0.91
MSH2-202ENST00000406134 FRMPD2BQ6IN97 320 aa9.36□□□□□ -0.91
MSH2-202ENST00000406134 SYTL1Q8IYJ3 562 aa9.36□□□□□ -0.91
MSH2-202ENST00000406134 VPS37AQ8NEZ2 397 aa9.36□□□□□ -0.91
MSH2-202ENST00000406134 OR2L2Q8NH16 312 aa9.36□□□□□ -0.91
MSH2-202ENST00000406134 MYDGFQ969H8 173 aa9.36□□□□□ -0.91
MSH2-202ENST00000406134 MTERF3Q96E29 417 aa9.36□□□□□ -0.91
MSH2-202ENST00000406134 MVB12BQ9H7P6 319 aa9.36□□□□□ -0.91
MSH2-202ENST00000406134 TBC1D24Q9ULP9 559 aa9.36□□□□□ -0.91
MSH2-202ENST00000406134 MAPRE3Q9UPY8 281 aa9.36□□□□□ -0.91
MSH2-202ENST00000406134 FAM32AQ9Y421 112 aaKnown RBP9.36□□□□□ -0.91
MSH2-202ENST00000406134 TRPM6Q9BX84 2022 aa9.36□□□□□ -0.91
MSH2-202ENST00000406134 HEPACAM2A8MVW5 462 aa9.36□□□□□ -0.91
MSH2-202ENST00000406134 RFXAPO00287 272 aa9.36□□□□□ -0.91
MSH2-202ENST00000406134 PPM1DO15297 605 aa9.36□□□□□ -0.91
MSH2-202ENST00000406134 ZW10O43264 779 aa9.36□□□□□ -0.91
MSH2-202ENST00000406134 TBX1O43435 398 aa9.36□□□□□ -0.91
MSH2-202ENST00000406134 TMPRSS11DO60235 418 aa9.36□□□□□ -0.91
MSH2-202ENST00000406134 ENTPD6O75354 484 aa9.36□□□□□ -0.91
MSH2-202ENST00000406134 HBQ1P09105 142 aa9.36□□□□□ -0.91
MSH2-202ENST00000406134 ALOX5P09917 674 aa9.36□□□□□ -0.91
MSH2-202ENST00000406134 PIPP12273 146 aaPredicted RBP9.36□□□□□ -0.91
MSH2-202ENST00000406134 SERPINB10P48595 397 aa9.36□□□□□ -0.91
MSH2-202ENST00000406134 DPTQ07507 201 aa9.36□□□□□ -0.91
MSH2-202ENST00000406134 DHCR24Q15392 516 aa9.36□□□□□ -0.91
MSH2-202ENST00000406134 LRRC26Q2I0M4 334 aa9.36□□□□□ -0.91
MSH2-202ENST00000406134 ZNF181Q2M3W8 571 aa9.36□□□□□ -0.91
MSH2-202ENST00000406134 TPRG1LQ5T0D9 272 aa9.36□□□□□ -0.91
MSH2-202ENST00000406134 PNCKQ6P2M8 343 aa9.36□□□□□ -0.91
MSH2-202ENST00000406134 ANGPTL8Q6UXH0 198 aa9.36□□□□□ -0.91
MSH2-202ENST00000406134 OLIG3Q7RTU3 272 aa9.36□□□□□ -0.91
MSH2-202ENST00000406134 ARMC8Q8IUR7 673 aa9.36□□□□□ -0.91
MSH2-202ENST00000406134 CHFRQ96EP1 664 aa9.36□□□□□ -0.91
MSH2-202ENST00000406134 ATAD3AQ9NVI7 634 aa9.36□□□□□ -0.91
MSH2-202ENST00000406134 WASHC1A8K0Z3 465 aa9.35□□□□□ -0.91
MSH2-202ENST00000406134 TBX19O60806 448 aa9.35□□□□□ -0.91
MSH2-202ENST00000406134 CSO75390 466 aaKnown RBP9.35□□□□□ -0.91
MSH2-202ENST00000406134 GADD45GO95257 159 aa9.35□□□□□ -0.91
MSH2-202ENST00000406134 DBTP11182 482 aaKnown RBP9.35□□□□□ -0.91
MSH2-202ENST00000406134 UQCRC2P22695 453 aa9.35□□□□□ -0.91
MSH2-202ENST00000406134 PTX3P26022 381 aaPredicted RBP9.35□□□□□ -0.91
MSH2-202ENST00000406134 PPM1AP35813 382 aa9.35□□□□□ -0.91
MSH2-202ENST00000406134 CRYBB2P43320 205 aa9.35□□□□□ -0.91
MSH2-202ENST00000406134 TGM4P49221 684 aa9.35□□□□□ -0.91
MSH2-202ENST00000406134 CRISP1P54107 249 aa9.35□□□□□ -0.91
MSH2-202ENST00000406134 DSTNP60981 165 aa9.35□□□□□ -0.91
MSH2-202ENST00000406134 COL9A2Q14055 689 aaPredicted RBP9.35□□□□□ -0.91
MSH2-202ENST00000406134 STARD3Q14849 445 aa9.35□□□□□ -0.91
MSH2-202ENST00000406134 PAQR6Q6TCH4 344 aa9.35□□□□□ -0.91
MSH2-202ENST00000406134 LCTLQ6UWM7 567 aa9.35□□□□□ -0.91
MSH2-202ENST00000406134 WASH2PQ6VEQ5 465 aa9.35□□□□□ -0.91
MSH2-202ENST00000406134 IKBIPQ70UQ0 350 aa9.35□□□□□ -0.91
MSH2-202ENST00000406134 GET4Q7L5D6 327 aaPredicted RBP9.35□□□□□ -0.91
MSH2-202ENST00000406134 GDPD3Q7L5L3 318 aa9.35□□□□□ -0.91
MSH2-202ENST00000406134 ZNF367Q7RTV3 350 aa9.35□□□□□ -0.91
MSH2-202ENST00000406134 PLD3Q8IV08 490 aa9.35□□□□□ -0.91
MSH2-202ENST00000406134 P3H2Q8IVL5 708 aa9.35□□□□□ -0.91
MSH2-202ENST00000406134 LRIG1Q96JA1 1093 aa9.35□□□□□ -0.91
MSH2-202ENST00000406134 LGR4Q9BXB1 951 aa9.35□□□□□ -0.91
MSH2-202ENST00000406134 MS4A8Q9BY19 250 aa9.35□□□□□ -0.91
MSH2-202ENST00000406134 CNOT2Q9NZN8 540 aaKnown RBP9.35□□□□□ -0.91
MSH2-202ENST00000406134 A4GNTQ9UNA3 340 aa9.35□□□□□ -0.91
MSH2-202ENST00000406134 V9GYH0 126 aa9.35□□□□□ -0.91
MSH2-202ENST00000406134 MN1Q10571 1320 aaPredicted RBP9.35□□□□□ -0.91
MSH2-202ENST00000406134 A8MU76 341 aa9.35□□□□□ -0.91
MSH2-202ENST00000406134 CCNB2O95067 398 aa9.35□□□□□ -0.91
MSH2-202ENST00000406134 DDCP20711 480 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms