RNA–Protein interactions for RNA: ENST00000404424.5

CLIP4-204, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLIP4, Length 2,480 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-204ENST00000404424 FGF19O95750 216 aa10.23□□□□□ -0.77
CLIP4-204ENST00000404424 SPNP16150 400 aa10.23□□□□□ -0.77
CLIP4-204ENST00000404424 DDCP20711 480 aa10.23□□□□□ -0.77
CLIP4-204ENST00000404424 PSMA1P25786 263 aaKnown RBP10.23□□□□□ -0.77
CLIP4-204ENST00000404424 POU1F1P28069 291 aa10.23□□□□□ -0.77
CLIP4-204ENST00000404424 CCR2P41597 374 aa10.23□□□□□ -0.77
CLIP4-204ENST00000404424 CASP3P42574 277 aa10.23□□□□□ -0.77
CLIP4-204ENST00000404424 DGKGP49619 791 aa10.23□□□□□ -0.77
CLIP4-204ENST00000404424 LIM2P55344 173 aa10.23□□□□□ -0.77
CLIP4-204ENST00000404424 SMIM11AP58511 58 aa10.23□□□□□ -0.77
CLIP4-204ENST00000404424 LY6G5CQ5SRR4 150 aa10.23□□□□□ -0.77
CLIP4-204ENST00000404424 DCST1Q5T197 706 aa10.23□□□□□ -0.77
CLIP4-204ENST00000404424 IER5LQ5T953 404 aa10.23□□□□□ -0.77
CLIP4-204ENST00000404424 TMIGD1Q6UXZ0 262 aa10.23□□□□□ -0.77
CLIP4-204ENST00000404424 TRMT11Q7Z4G4 463 aaKnown RBP10.23□□□□□ -0.77
CLIP4-204ENST00000404424 SLC9B2Q86UD5 537 aa10.23□□□□□ -0.77
CLIP4-204ENST00000404424 TMCO6Q96DC7 493 aa10.23□□□□□ -0.77
CLIP4-204ENST00000404424 TMEM80Q96HE8 168 aa10.23□□□□□ -0.77
CLIP4-204ENST00000404424 DHRS1Q96LJ7 313 aa10.23□□□□□ -0.77
CLIP4-204ENST00000404424 COQ10AQ96MF6 247 aa10.23□□□□□ -0.77
CLIP4-204ENST00000404424 TMEM121BQ9BXQ6 578 aaPredicted RBP10.23□□□□□ -0.77
CLIP4-204ENST00000404424 HOXD1Q9GZZ0 328 aa10.23□□□□□ -0.77
CLIP4-204ENST00000404424 NEUROD4Q9HD90 331 aa10.23□□□□□ -0.77
CLIP4-204ENST00000404424 TDP1Q9NUW8 608 aa10.23□□□□□ -0.77
CLIP4-204ENST00000404424 RHCGQ9UBD6 479 aa10.23□□□□□ -0.77
CLIP4-204ENST00000404424 REV1Q9UBZ9 1251 aa10.23□□□□□ -0.77
CLIP4-204ENST00000404424 SEC14L4Q9UDX3 406 aa10.23□□□□□ -0.77
CLIP4-204ENST00000404424 KLHL3Q9UH77 587 aa10.23□□□□□ -0.77
CLIP4-204ENST00000404424 LSM2Q9Y333 95 aaKnown RBP10.23□□□□□ -0.77
CLIP4-204ENST00000404424 RPL36Q9Y3U8 105 aaKnown RBP10.23□□□□□ -0.77
CLIP4-204ENST00000404424 ENTPD6O75354 484 aa10.22□□□□□ -0.77
CLIP4-204ENST00000404424 GPX5O75715 221 aa10.22□□□□□ -0.77
CLIP4-204ENST00000404424 SLITRK5O94991 958 aa10.22□□□□□ -0.77
CLIP4-204ENST00000404424 SEMA3DO95025 777 aa10.22□□□□□ -0.77
CLIP4-204ENST00000404424 MFN2O95140 757 aa10.22□□□□□ -0.77
CLIP4-204ENST00000404424 DNTTP04053 509 aa10.22□□□□□ -0.77
CLIP4-204ENST00000404424 ADH1AP07327 375 aa10.22□□□□□ -0.77
CLIP4-204ENST00000404424 ADRA2AP08913 450 aa10.22□□□□□ -0.77
CLIP4-204ENST00000404424 GRIN2CQ14957 1233 aa10.22□□□□□ -0.77
CLIP4-204ENST00000404424 NDUFA5Q16718 116 aa10.22□□□□□ -0.77
CLIP4-204ENST00000404424 TRAPPC5Q8IUR0 188 aa10.22□□□□□ -0.77
CLIP4-204ENST00000404424 SLC38A5Q8WUX1 472 aa10.22□□□□□ -0.77
CLIP4-204ENST00000404424 MYLIPQ8WY64 445 aa10.22□□□□□ -0.77
CLIP4-204ENST00000404424 OTUB2Q96DC9 234 aa10.22□□□□□ -0.77
CLIP4-204ENST00000404424 SDHCQ99643 169 aaPredicted RBP10.22□□□□□ -0.77
CLIP4-204ENST00000404424 MND1Q9BWT6 205 aa10.22□□□□□ -0.77
CLIP4-204ENST00000404424 LINC00597Q9H2U6 94 aa10.22□□□□□ -0.77
CLIP4-204ENST00000404424 SPNS1Q9H2V7 528 aa10.22□□□□□ -0.77
CLIP4-204ENST00000404424 HHATLQ9HCP6 504 aa10.22□□□□□ -0.77
CLIP4-204ENST00000404424 MARK1Q9P0L2 795 aa10.22□□□□□ -0.77
CLIP4-204ENST00000404424 POU2F3Q9UKI9 436 aa10.22□□□□□ -0.77
CLIP4-204ENST00000404424 SNX8Q9Y5X2 465 aa10.22□□□□□ -0.77
CLIP4-204ENST00000404424 TRBV4-1A0A0J9YWV2 114 aa10.22□□□□□ -0.77
CLIP4-204ENST00000404424 MMP20O60882 483 aa10.22□□□□□ -0.77
CLIP4-204ENST00000404424 SOD1P00441 154 aa10.22□□□□□ -0.77
CLIP4-204ENST00000404424 BCHEP06276 602 aa10.22□□□□□ -0.77
CLIP4-204ENST00000404424 ELAVL4P26378 380 aaKnown RBP10.22□□□□□ -0.77
CLIP4-204ENST00000404424 MANFP55145 182 aaKnown RBP10.22□□□□□ -0.77
CLIP4-204ENST00000404424 MEF2AQ02078 507 aaPredicted RBP10.22□□□□□ -0.77
CLIP4-204ENST00000404424 HEPACAMQ14CZ8 416 aa10.22□□□□□ -0.77
CLIP4-204ENST00000404424 SPHARQ15513 63 aa10.22□□□□□ -0.77
CLIP4-204ENST00000404424 ARHGAP15Q53QZ3 475 aa10.22□□□□□ -0.77
CLIP4-204ENST00000404424 PRAMEF14Q5SWL7 426 aa10.22□□□□□ -0.77
CLIP4-204ENST00000404424 AGAP6Q5VW22 663 aa10.22□□□□□ -0.77
CLIP4-204ENST00000404424 PRAMEF13Q5VWM6 474 aa10.22□□□□□ -0.77
CLIP4-204ENST00000404424 C12orf73Q69YU5 71 aa10.22□□□□□ -0.77
CLIP4-204ENST00000404424 CASP12Q6UXS9 341 aa10.22□□□□□ -0.77
CLIP4-204ENST00000404424 ZNF765Q7L2R6 523 aa10.22□□□□□ -0.77
CLIP4-204ENST00000404424 PARS2Q7L3T8 475 aaKnown RBP10.22□□□□□ -0.77
CLIP4-204ENST00000404424 TMCO2Q7Z6W1 182 aaPredicted RBP10.22□□□□□ -0.77
CLIP4-204ENST00000404424 FAM129CQ86XR2 697 aa10.22□□□□□ -0.77
CLIP4-204ENST00000404424 HORMAD2Q8N7B1 307 aa10.22□□□□□ -0.77
CLIP4-204ENST00000404424 PROKR2Q8NFJ6 384 aa10.22□□□□□ -0.77
CLIP4-204ENST00000404424 IL17RDQ8NFM7 739 aa10.22□□□□□ -0.77
CLIP4-204ENST00000404424 OR8J1Q8NGP2 316 aa10.22□□□□□ -0.77
CLIP4-204ENST00000404424 SORCS1Q8WY21 1168 aa10.22□□□□□ -0.77
CLIP4-204ENST00000404424 TMEM19Q96HH6 336 aa10.22□□□□□ -0.77
CLIP4-204ENST00000404424 TOX2Q96NM4 488 aa10.22□□□□□ -0.77
CLIP4-204ENST00000404424 AGAP4Q96P64 663 aa10.22□□□□□ -0.77
CLIP4-204ENST00000404424 ASPNQ9BXN1 380 aa10.22□□□□□ -0.77
CLIP4-204ENST00000404424 OR2AG1Q9H205 316 aa10.22□□□□□ -0.77
CLIP4-204ENST00000404424 SMURF1Q9HCE7 757 aa10.22□□□□□ -0.77
CLIP4-204ENST00000404424 GPR34Q9UPC5 381 aa10.22□□□□□ -0.77
CLIP4-204ENST00000404424 CAB39Q9Y376 341 aaPredicted RBP10.22□□□□□ -0.77
CLIP4-204ENST00000404424 GRIP1Q9Y3R0 1128 aa10.22□□□□□ -0.77
CLIP4-204ENST00000404424 CTDSP2O14595 271 aa10.21□□□□□ -0.77
CLIP4-204ENST00000404424 CCL16O15467 120 aa10.21□□□□□ -0.77
CLIP4-204ENST00000404424 OR10H3O60404 316 aa10.21□□□□□ -0.77
CLIP4-204ENST00000404424 FGF18O76093 207 aa10.21□□□□□ -0.77
CLIP4-204ENST00000404424 H1F0P07305 194 aaKnown RBP10.21□□□□□ -0.77
CLIP4-204ENST00000404424 ACADLP28330 430 aa10.21□□□□□ -0.77
CLIP4-204ENST00000404424 TNFSF8P32971 234 aa10.21□□□□□ -0.77
CLIP4-204ENST00000404424 RORCP51449 518 aa10.21□□□□□ -0.77
CLIP4-204ENST00000404424 XKP51811 444 aa10.21□□□□□ -0.77
CLIP4-204ENST00000404424 EPHA5P54756 1037 aa10.21□□□□□ -0.77
CLIP4-204ENST00000404424 CNTN1Q12860 1018 aa10.21□□□□□ -0.77
CLIP4-204ENST00000404424 OCLNQ16625 522 aa10.21□□□□□ -0.77
CLIP4-204ENST00000404424 TCTN3Q6NUS6 607 aa10.21□□□□□ -0.77
CLIP4-204ENST00000404424 TMC5Q6UXY8 1006 aa10.21□□□□□ -0.77
CLIP4-204ENST00000404424 PRR23CQ6ZRP0 262 aa10.21□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms