RNA–Protein interactions for RNA: ENST00000403537.3

THUMPD2-202, Transcript of THUMP domain containing 2, humanhuman

TSL 1 (best)

Gene THUMPD2, Length 961 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD2-202ENST00000403537 CPEB2Q7Z5Q1 589 aaKnown RBP16.8■□□□□ 0.28
THUMPD2-202ENST00000403537 CA13Q8N1Q1 262 aa16.8■□□□□ 0.28
THUMPD2-202ENST00000403537 ZNF781Q8N8C0 355 aa16.8■□□□□ 0.28
THUMPD2-202ENST00000403537 FAR2Q96K12 515 aa16.8■□□□□ 0.28
THUMPD2-202ENST00000403537 KCNC2Q96PR1 638 aa16.8■□□□□ 0.28
THUMPD2-202ENST00000403537 LUZP4Q9P127 313 aa16.8■□□□□ 0.28
THUMPD2-202ENST00000403537 LRRK2Q5S007 2527 aa16.8■□□□□ 0.28
THUMPD2-202ENST00000403537 A0A088AWK7 358 aa16.79■□□□□ 0.28
THUMPD2-202ENST00000403537 TMEM114B3SHH9 223 aa16.79■□□□□ 0.28
THUMPD2-202ENST00000403537 FAM227AF5H4B4 570 aa16.79■□□□□ 0.28
THUMPD2-202ENST00000403537 DYNC1I1O14576 645 aa16.79■□□□□ 0.28
THUMPD2-202ENST00000403537 ULK1O75385 1050 aa16.79■□□□□ 0.28
THUMPD2-202ENST00000403537 CDC123O75794 336 aaPredicted RBP16.79■□□□□ 0.28
THUMPD2-202ENST00000403537 JUNP05412 331 aaKnown RBP16.79■□□□□ 0.28
THUMPD2-202ENST00000403537 UROSP10746 265 aa16.79■□□□□ 0.28
THUMPD2-202ENST00000403537 ZNF10P21506 573 aaPredicted RBP16.79■□□□□ 0.28
THUMPD2-202ENST00000403537 PTX3P26022 381 aaPredicted RBP16.79■□□□□ 0.28
THUMPD2-202ENST00000403537 BSGP35613 385 aa16.79■□□□□ 0.28
THUMPD2-202ENST00000403537 SOX11P35716 441 aa16.79■□□□□ 0.28
THUMPD2-202ENST00000403537 SERPINB5P36952 375 aa16.79■□□□□ 0.28
THUMPD2-202ENST00000403537 SLC1A6P48664 564 aa16.79■□□□□ 0.28
THUMPD2-202ENST00000403537 MTTPP55157 894 aa16.79■□□□□ 0.28
THUMPD2-202ENST00000403537 GALNT1Q10472 559 aaPredicted RBP16.79■□□□□ 0.28
THUMPD2-202ENST00000403537 TBL3Q12788 808 aaKnown RBP16.79■□□□□ 0.28
THUMPD2-202ENST00000403537 STX3Q13277 289 aa16.79■□□□□ 0.28
THUMPD2-202ENST00000403537 CUL3Q13618 768 aa16.79■□□□□ 0.28
THUMPD2-202ENST00000403537 ZNF169Q14929 603 aaPredicted RBP16.79■□□□□ 0.28
THUMPD2-202ENST00000403537 EXT1Q16394 746 aa16.79■□□□□ 0.28
THUMPD2-202ENST00000403537 UGT3A2Q3SY77 523 aa16.79■□□□□ 0.28
THUMPD2-202ENST00000403537 FHL5Q5TD97 284 aa16.79■□□□□ 0.28
THUMPD2-202ENST00000403537 ACOT4Q8N9L9 421 aa16.79■□□□□ 0.28
THUMPD2-202ENST00000403537 PLPP5Q8NEB5 264 aa16.79■□□□□ 0.28
THUMPD2-202ENST00000403537 RGMAQ96B86 450 aa16.79■□□□□ 0.28
THUMPD2-202ENST00000403537 TBC1D20Q96BZ9 403 aa16.79■□□□□ 0.28
THUMPD2-202ENST00000403537 SNRNP40Q96DI7 357 aaKnown RBP16.79■□□□□ 0.28
THUMPD2-202ENST00000403537 IMMP1LQ96LU5 166 aa16.79■□□□□ 0.28
THUMPD2-202ENST00000403537 CSF3RQ99062 836 aa16.79■□□□□ 0.28
THUMPD2-202ENST00000403537 SERPINI1Q99574 410 aa16.79■□□□□ 0.28
THUMPD2-202ENST00000403537 COPS7BQ9H9Q2 264 aaPredicted RBP16.79■□□□□ 0.28
THUMPD2-202ENST00000403537 ZBTB20Q9HC78 741 aaPredicted RBP16.79■□□□□ 0.28
THUMPD2-202ENST00000403537 PPT2Q9UMR5 302 aa16.79■□□□□ 0.28
THUMPD2-202ENST00000403537 TRAF6Q9Y4K3 522 aa16.79■□□□□ 0.28
THUMPD2-202ENST00000403537 DNAJC15Q9Y5T4 150 aa16.79■□□□□ 0.28
THUMPD2-202ENST00000403537 PSMD12O00232 456 aaPredicted RBP16.78■□□□□ 0.28
THUMPD2-202ENST00000403537 B3GALT2O43825 422 aa16.78■□□□□ 0.28
THUMPD2-202ENST00000403537 TMPRSS11DO60235 418 aa16.78■□□□□ 0.28
THUMPD2-202ENST00000403537 HIST1H1TP22492 207 aaPredicted RBP16.78■□□□□ 0.28
THUMPD2-202ENST00000403537 HNRNPFP52597 415 aaKnown RBP16.78■□□□□ 0.28
THUMPD2-202ENST00000403537 CSTF3Q12996 717 aaKnown RBP16.78■□□□□ 0.28
THUMPD2-202ENST00000403537 ABHD17BQ5VST6 288 aa16.78■□□□□ 0.28
THUMPD2-202ENST00000403537 PLAG1Q6DJT9 500 aa16.78■□□□□ 0.28
THUMPD2-202ENST00000403537 OR4C11Q6IEV9 310 aa16.78■□□□□ 0.28
THUMPD2-202ENST00000403537 RPUSD3Q6P087 351 aaKnown RBP16.78■□□□□ 0.28
THUMPD2-202ENST00000403537 LINC00696Q6ZRV3 163 aa16.78■□□□□ 0.28
THUMPD2-202ENST00000403537 CISD2Q8N5K1 135 aaKnown RBP16.78■□□□□ 0.28
THUMPD2-202ENST00000403537 FAM47BQ8NA70 645 aa16.78■□□□□ 0.28
THUMPD2-202ENST00000403537 TMEM52Q8NDY8 209 aa16.78■□□□□ 0.28
THUMPD2-202ENST00000403537 OR2T11Q8NH01 316 aa16.78■□□□□ 0.28
THUMPD2-202ENST00000403537 BRIX1Q8TDN6 353 aaKnown RBP16.78■□□□□ 0.28
THUMPD2-202ENST00000403537 TWIST2Q8WVJ9 160 aa16.78■□□□□ 0.28
THUMPD2-202ENST00000403537 HAS2Q92819 552 aa16.78■□□□□ 0.28
THUMPD2-202ENST00000403537 SERINC2Q96SA4 455 aa16.78■□□□□ 0.28
THUMPD2-202ENST00000403537 MAPKAP1Q9BPZ7 522 aa16.78■□□□□ 0.28
THUMPD2-202ENST00000403537 TBCDQ9BTW9 1192 aa16.78■□□□□ 0.28
THUMPD2-202ENST00000403537 RNF32Q9H0A6 362 aa16.78■□□□□ 0.28
THUMPD2-202ENST00000403537 BRF2Q9HAW0 419 aa16.78■□□□□ 0.28
THUMPD2-202ENST00000403537 EML4Q9HC35 981 aaKnown RBP16.78■□□□□ 0.28
THUMPD2-202ENST00000403537 LANCL2Q9NS86 450 aa16.78■□□□□ 0.28
THUMPD2-202ENST00000403537 PTGFRNQ9P2B2 879 aa16.78■□□□□ 0.28
THUMPD2-202ENST00000403537 A0A0A6YYD5 115 aa16.77■□□□□ 0.28
THUMPD2-202ENST00000403537 TRAV17A0A0B4J275 112 aa16.77■□□□□ 0.28
THUMPD2-202ENST00000403537 PIP5K1BO14986 540 aa16.77■□□□□ 0.28
THUMPD2-202ENST00000403537 SNNO75324 88 aaPredicted RBP16.77■□□□□ 0.28
THUMPD2-202ENST00000403537 SKAP2O75563 359 aaPredicted RBP16.77■□□□□ 0.28
THUMPD2-202ENST00000403537 PRKRAO75569 313 aaKnown RBP16.77■□□□□ 0.28
THUMPD2-202ENST00000403537 SEMA3DO95025 777 aa16.77■□□□□ 0.28
THUMPD2-202ENST00000403537 SCELO95171 688 aa16.77■□□□□ 0.28
THUMPD2-202ENST00000403537 FHP07954 510 aa16.77■□□□□ 0.28
THUMPD2-202ENST00000403537 LINC00032P0C843 101 aa16.77■□□□□ 0.28
THUMPD2-202ENST00000403537 RNH1P13489 461 aaKnown RBP16.77■□□□□ 0.28
THUMPD2-202ENST00000403537 GNLYP22749 145 aa16.77■□□□□ 0.28
THUMPD2-202ENST00000403537 GRK2P25098 689 aa16.77■□□□□ 0.28
THUMPD2-202ENST00000403537 LIM2P55344 173 aa16.77■□□□□ 0.28
THUMPD2-202ENST00000403537 HNRNPH2P55795 449 aaKnown RBP16.77■□□□□ 0.28
THUMPD2-202ENST00000403537 ARG2P78540 354 aa16.77■□□□□ 0.28
THUMPD2-202ENST00000403537 BTKQ06187 659 aa16.77■□□□□ 0.28
THUMPD2-202ENST00000403537 ACTN3Q08043 901 aaPredicted RBP16.77■□□□□ 0.28
THUMPD2-202ENST00000403537 TGM3Q08188 693 aa16.77■□□□□ 0.28
THUMPD2-202ENST00000403537 ELOAQ14241 798 aaKnown RBP16.77■□□□□ 0.28
THUMPD2-202ENST00000403537 NSDHLQ15738 373 aa16.77■□□□□ 0.28
THUMPD2-202ENST00000403537 INAQ16352 499 aa16.77■□□□□ 0.28
THUMPD2-202ENST00000403537 AP5B1Q2VPB7 878 aa16.77■□□□□ 0.28
THUMPD2-202ENST00000403537 C10orf62Q5T681 223 aaPredicted RBP16.77■□□□□ 0.28
THUMPD2-202ENST00000403537 COMMD6Q7Z4G1 85 aa16.77■□□□□ 0.28
THUMPD2-202ENST00000403537 ANKRD37Q7Z713 158 aa16.77■□□□□ 0.28
THUMPD2-202ENST00000403537 METTL4Q8N3J2 472 aa16.77■□□□□ 0.28
THUMPD2-202ENST00000403537 C1orf52Q8N6N3 182 aaKnown RBP16.77■□□□□ 0.28
THUMPD2-202ENST00000403537 AMER2Q8N7J2 671 aa16.77■□□□□ 0.28
THUMPD2-202ENST00000403537 PSMF1Q92530 271 aa16.77■□□□□ 0.28
THUMPD2-202ENST00000403537 APIPQ96GX9 242 aa16.77■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms