RNA–Protein interactions for RNA: ENST00000402738.5

HERC3-202, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HERC3, Length 4,974 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC3-202ENST00000402738 SPATA31A5Q5VU36 1347 aa9.42□□□□□ -0.9
HERC3-202ENST00000402738 SPATA31A7Q8IWB4 1347 aa9.42□□□□□ -0.9
HERC3-202ENST00000402738 A0A1B0GVC2 190 aa9.42□□□□□ -0.9
HERC3-202ENST00000402738 LRRC72A6NJI9 287 aa9.42□□□□□ -0.9
HERC3-202ENST00000402738 DDCP20711 480 aa9.42□□□□□ -0.9
HERC3-202ENST00000402738 ZNF157P51786 506 aaPredicted RBP9.42□□□□□ -0.9
HERC3-202ENST00000402738 DYRK1AQ13627 763 aa9.42□□□□□ -0.9
HERC3-202ENST00000402738 OXA1LQ15070 435 aa9.42□□□□□ -0.9
HERC3-202ENST00000402738 OR4D1Q15615 310 aa9.42□□□□□ -0.9
HERC3-202ENST00000402738 BAIAP2L2Q6UXY1 529 aa9.42□□□□□ -0.9
HERC3-202ENST00000402738 MBOAT1Q6ZNC8 495 aa9.42□□□□□ -0.9
HERC3-202ENST00000402738 ZCCHC10Q8TBK6 192 aa9.42□□□□□ -0.9
HERC3-202ENST00000402738 FKBP10Q96AY3 582 aa9.42□□□□□ -0.9
HERC3-202ENST00000402738 SLC6A7Q99884 636 aa9.42□□□□□ -0.9
HERC3-202ENST00000402738 RPS10P5Q9NQ39 176 aa9.42□□□□□ -0.9
HERC3-202ENST00000402738 NPAP1Q9NZP6 1156 aa9.42□□□□□ -0.9
HERC3-202ENST00000402738 GMPR2Q9P2T1 348 aaKnown RBP9.42□□□□□ -0.9
HERC3-202ENST00000402738 PLIN4Q96Q06 1357 aa9.42□□□□□ -0.9
HERC3-202ENST00000402738 ZNF670-ZNF695F2Z2N8 137 aa9.42□□□□□ -0.9
HERC3-202ENST00000402738 BEST1O76090 585 aa9.42□□□□□ -0.9
HERC3-202ENST00000402738 KAT7O95251 611 aa9.42□□□□□ -0.9
HERC3-202ENST00000402738 RENP00797 406 aa9.42□□□□□ -0.9
HERC3-202ENST00000402738 ACADMP11310 421 aa9.42□□□□□ -0.9
HERC3-202ENST00000402738 GPX3P22352 226 aa9.42□□□□□ -0.9
HERC3-202ENST00000402738 PKLRP30613 574 aa9.42□□□□□ -0.9
HERC3-202ENST00000402738 ACVRL1P37023 503 aa9.42□□□□□ -0.9
HERC3-202ENST00000402738 PITPNBP48739 271 aa9.42□□□□□ -0.9
HERC3-202ENST00000402738 RPS13P62277 151 aaKnown RBP9.42□□□□□ -0.9
HERC3-202ENST00000402738 NHSL2Q5HYW2 709 aa9.42□□□□□ -0.9
HERC3-202ENST00000402738 ZNF691Q5VV52 312 aa9.42□□□□□ -0.9
HERC3-202ENST00000402738 GDPGP1Q6ZNW5 385 aa9.42□□□□□ -0.9
HERC3-202ENST00000402738 THOC6Q86W42 341 aaKnown RBP9.42□□□□□ -0.9
HERC3-202ENST00000402738 RHEBL1Q8TAI7 183 aa9.42□□□□□ -0.9
HERC3-202ENST00000402738 GNPDA2Q8TDQ7 276 aa9.42□□□□□ -0.9
HERC3-202ENST00000402738 CLCC1Q96S66 551 aa9.42□□□□□ -0.9
HERC3-202ENST00000402738 RAD9AQ99638 391 aa9.42□□□□□ -0.9
HERC3-202ENST00000402738 MFFQ9GZY8 342 aa9.42□□□□□ -0.9
HERC3-202ENST00000402738 XRN2Q9H0D6 950 aaKnown RBP eCLIP9.42□□□□□ -0.9
HERC3-202ENST00000402738 PCDHB11Q9Y5F2 797 aa9.42□□□□□ -0.9
HERC3-202ENST00000402738 A6NIN4 97 aa9.41□□□□□ -0.9
HERC3-202ENST00000402738 PDHXO00330 501 aa9.41□□□□□ -0.9
HERC3-202ENST00000402738 ZNF254O75437 659 aa9.41□□□□□ -0.9
HERC3-202ENST00000402738 HTR1AP08908 422 aa9.41□□□□□ -0.9
HERC3-202ENST00000402738 GKN3PP0CG01 181 aa9.41□□□□□ -0.9
HERC3-202ENST00000402738 MAGEA11P43364 429 aa9.41□□□□□ -0.9
HERC3-202ENST00000402738 CHRNA6Q15825 494 aa9.41□□□□□ -0.9
HERC3-202ENST00000402738 CXCL17Q6UXB2 119 aa9.41□□□□□ -0.9
HERC3-202ENST00000402738 B3GNT7Q8NFL0 401 aa9.41□□□□□ -0.9
HERC3-202ENST00000402738 OR5T3Q8NGG3 340 aa9.41□□□□□ -0.9
HERC3-202ENST00000402738 SGCDQ92629 289 aa9.41□□□□□ -0.9
HERC3-202ENST00000402738 THAP7Q9BT49 309 aaPredicted RBP9.41□□□□□ -0.9
HERC3-202ENST00000402738 EFCAB11Q9BUY7 163 aa9.41□□□□□ -0.9
HERC3-202ENST00000402738 CCDC86Q9H6F5 360 aaKnown RBP9.41□□□□□ -0.9
HERC3-202ENST00000402738 POPDC3Q9HBV1 291 aa9.41□□□□□ -0.9
HERC3-202ENST00000402738 SLAMF7Q9NQ25 335 aa9.41□□□□□ -0.9
HERC3-202ENST00000402738 AGPAT2O15120 278 aa9.41□□□□□ -0.9
HERC3-202ENST00000402738 SC5DO75845 299 aa9.41□□□□□ -0.9
HERC3-202ENST00000402738 CYB5AP00167 134 aa9.41□□□□□ -0.9
HERC3-202ENST00000402738 PDYNP01213 254 aa9.41□□□□□ -0.9
HERC3-202ENST00000402738 EPOP01588 193 aa9.41□□□□□ -0.9
HERC3-202ENST00000402738 CDK1P06493 297 aa9.41□□□□□ -0.9
HERC3-202ENST00000402738 EDNRBP24530 442 aa9.41□□□□□ -0.9
HERC3-202ENST00000402738 BMP8BP34820 402 aa9.41□□□□□ -0.9
HERC3-202ENST00000402738 MLLT6P55198 1093 aaPredicted RBP9.41□□□□□ -0.9
HERC3-202ENST00000402738 FAPQ12884 760 aa9.41□□□□□ -0.9
HERC3-202ENST00000402738 BATFQ16520 125 aa9.41□□□□□ -0.9
HERC3-202ENST00000402738 SLC8B1Q6J4K2 584 aa9.41□□□□□ -0.9
HERC3-202ENST00000402738 BMP8AQ7Z5Y6 402 aa9.41□□□□□ -0.9
HERC3-202ENST00000402738 HMGN2P46Q86SG4 172 aa9.41□□□□□ -0.9
HERC3-202ENST00000402738 NUDT13Q86X67 352 aa9.41□□□□□ -0.9
HERC3-202ENST00000402738 PHYKPLQ8IUZ5 450 aa9.41□□□□□ -0.9
HERC3-202ENST00000402738 IQCF1Q8N6M8 205 aa9.41□□□□□ -0.9
HERC3-202ENST00000402738 SYT14Q8NB59 555 aa9.41□□□□□ -0.9
HERC3-202ENST00000402738 OR9Q2Q8NGE9 314 aa9.41□□□□□ -0.9
HERC3-202ENST00000402738 TRMT10AQ8TBZ6 339 aaKnown RBP9.41□□□□□ -0.9
HERC3-202ENST00000402738 ADAMTS19Q8TE59 1207 aa9.41□□□□□ -0.9
HERC3-202ENST00000402738 ACBD6Q9BR61 282 aa9.41□□□□□ -0.9
HERC3-202ENST00000402738 WRAP53Q9BUR4 548 aaKnown RBP9.41□□□□□ -0.9
HERC3-202ENST00000402738 QRSL1Q9H0R6 528 aaKnown RBP9.41□□□□□ -0.9
HERC3-202ENST00000402738 ABCG4Q9H172 646 aa9.41□□□□□ -0.9
HERC3-202ENST00000402738 SOHLH2Q9NX45 425 aa9.41□□□□□ -0.9
HERC3-202ENST00000402738 MARCH4Q9P2E8 410 aaPredicted RBP9.41□□□□□ -0.9
HERC3-202ENST00000402738 BCL9LQ86UU0 1499 aa9.41□□□□□ -0.9
HERC3-202ENST00000402738 TBC1D3BA6NDS4 549 aa9.41□□□□□ -0.9
HERC3-202ENST00000402738 CLDN24A6NM45 220 aa9.41□□□□□ -0.9
HERC3-202ENST00000402738 C2orf74A8MZ97 194 aa9.41□□□□□ -0.9
HERC3-202ENST00000402738 FAM72CH0Y354 149 aa9.41□□□□□ -0.9
HERC3-202ENST00000402738 HPGDSO60760 199 aa9.41□□□□□ -0.9
HERC3-202ENST00000402738 CELF2O95319 508 aaKnown RBP9.41□□□□□ -0.9
HERC3-202ENST00000402738 TBX18O95935 607 aa9.41□□□□□ -0.9
HERC3-202ENST00000402738 S1PR4O95977 384 aa9.41□□□□□ -0.9
HERC3-202ENST00000402738 IFNA17P01571 189 aa9.41□□□□□ -0.9
HERC3-202ENST00000402738 MAPK3P27361 379 aaPredicted RBP9.41□□□□□ -0.9
HERC3-202ENST00000402738 HOXA10P31260 410 aaPredicted RBP9.41□□□□□ -0.9
HERC3-202ENST00000402738 NRIP1P48552 1158 aa9.41□□□□□ -0.9
HERC3-202ENST00000402738 PTH2RP49190 550 aa9.41□□□□□ -0.9
HERC3-202ENST00000402738 SREBF2Q12772 1141 aa9.41□□□□□ -0.9
HERC3-202ENST00000402738 TRAM2Q15035 370 aa9.41□□□□□ -0.9
HERC3-202ENST00000402738 GXYLT1Q4G148 440 aa9.41□□□□□ -0.9
HERC3-202ENST00000402738 NKAPLQ5M9Q1 402 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms