RNA–Protein interactions for RNA: ENST00000402555.2

HMGB1P20-201, Transcript of high mobility group box 1 pseudogene 20, humanhuman

BASIC

Gene HMGB1P20, Length 677 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P20-201ENST00000402555 EPB41L4BQ9H329 900 aa5.39□□□□□ -1.55
HMGB1P20-201ENST00000402555 CDCP1Q9H5V8 836 aa5.39□□□□□ -1.55
HMGB1P20-201ENST00000402555 IPPKQ9H8X2 491 aa5.39□□□□□ -1.55
HMGB1P20-201ENST00000402555 ACTR8Q9H981 624 aa5.39□□□□□ -1.55
HMGB1P20-201ENST00000402555 CLK4Q9HAZ1 481 aaKnown RBP5.39□□□□□ -1.55
HMGB1P20-201ENST00000402555 MMP25Q9NPA2 562 aa5.39□□□□□ -1.55
HMGB1P20-201ENST00000402555 DMRT3Q9NQL9 472 aa5.39□□□□□ -1.55
HMGB1P20-201ENST00000402555 AGPAT4Q9NRZ5 378 aa5.39□□□□□ -1.55
HMGB1P20-201ENST00000402555 TEKT2Q9UIF3 430 aa5.39□□□□□ -1.55
HMGB1P20-201ENST00000402555 ERRFI1Q9UJM3 462 aaPredicted RBP5.39□□□□□ -1.55
HMGB1P20-201ENST00000402555 ZNF223Q9UK11 482 aaPredicted RBP5.39□□□□□ -1.55
HMGB1P20-201ENST00000402555 FBXW2Q9UKT8 454 aa5.39□□□□□ -1.55
HMGB1P20-201ENST00000402555 DAPP1Q9UN19 280 aa5.39□□□□□ -1.55
HMGB1P20-201ENST00000402555 RNF11Q9Y3C5 154 aa5.39□□□□□ -1.55
HMGB1P20-201ENST00000402555 MMACHCQ9Y4U1 282 aa5.39□□□□□ -1.55
HMGB1P20-201ENST00000402555 A0A088AWK7 358 aa5.38□□□□□ -1.55
HMGB1P20-201ENST00000402555 A0A1B0GTL3 188 aa5.38□□□□□ -1.55
HMGB1P20-201ENST00000402555 A1L4Q6 167 aa5.38□□□□□ -1.55
HMGB1P20-201ENST00000402555 WASHC1A8K0Z3 465 aa5.38□□□□□ -1.55
HMGB1P20-201ENST00000402555 GOLGA8RI6L899 631 aa5.38□□□□□ -1.55
HMGB1P20-201ENST00000402555 PPP6CO00743 305 aa5.38□□□□□ -1.55
HMGB1P20-201ENST00000402555 CLDN4O14493 209 aa5.38□□□□□ -1.55
HMGB1P20-201ENST00000402555 PLPP1O14494 284 aa5.38□□□□□ -1.55
HMGB1P20-201ENST00000402555 OR7A17O14581 309 aa5.38□□□□□ -1.55
HMGB1P20-201ENST00000402555 ZNHIT1O43257 154 aa5.38□□□□□ -1.55
HMGB1P20-201ENST00000402555 PRKNO60260 465 aaPredicted RBP5.38□□□□□ -1.55
HMGB1P20-201ENST00000402555 PRAMEF2O60811 474 aa5.38□□□□□ -1.55
HMGB1P20-201ENST00000402555 SMIM24O75264 130 aa5.38□□□□□ -1.55
HMGB1P20-201ENST00000402555 EEDO75530 441 aaKnown RBP5.38□□□□□ -1.55
HMGB1P20-201ENST00000402555 PRKRAO75569 313 aaKnown RBP5.38□□□□□ -1.55
HMGB1P20-201ENST00000402555 IFNA16P05015 189 aa5.38□□□□□ -1.55
HMGB1P20-201ENST00000402555 ABHD2P08910 425 aa5.38□□□□□ -1.55
HMGB1P20-201ENST00000402555 SNRPAP09012 282 aaKnown RBP5.38□□□□□ -1.55
HMGB1P20-201ENST00000402555 RBP1P09455 135 aa5.38□□□□□ -1.55
HMGB1P20-201ENST00000402555 SBK3P0C264 359 aa5.38□□□□□ -1.55
HMGB1P20-201ENST00000402555 ZNF10P21506 573 aaPredicted RBP5.38□□□□□ -1.55
HMGB1P20-201ENST00000402555 HIST1H1TP22492 207 aaPredicted RBP5.38□□□□□ -1.55
HMGB1P20-201ENST00000402555 CPN2P22792 545 aa5.38□□□□□ -1.55
HMGB1P20-201ENST00000402555 ATP5A1P25705 553 aaKnown RBP5.38□□□□□ -1.55
HMGB1P20-201ENST00000402555 MST1P26927 711 aa5.38□□□□□ -1.55
HMGB1P20-201ENST00000402555 TPP2P29144 1249 aaPredicted RBP5.38□□□□□ -1.55
HMGB1P20-201ENST00000402555 CD96P40200 585 aa5.38□□□□□ -1.55
HMGB1P20-201ENST00000402555 SSR2P43308 183 aa5.38□□□□□ -1.55
HMGB1P20-201ENST00000402555 RAP1GDS1P52306 607 aa5.38□□□□□ -1.55
HMGB1P20-201ENST00000402555 HSD17B7P56937 341 aa5.38□□□□□ -1.55
HMGB1P20-201ENST00000402555 KCNK10P57789 538 aa5.38□□□□□ -1.55
HMGB1P20-201ENST00000402555 TAS2R50P59544 299 aa5.38□□□□□ -1.55
HMGB1P20-201ENST00000402555 AP2B1P63010 937 aa5.38□□□□□ -1.55
HMGB1P20-201ENST00000402555 OC90Q02509 493 aaPredicted RBP5.38□□□□□ -1.55
HMGB1P20-201ENST00000402555 PCDH1Q08174 1060 aa5.38□□□□□ -1.55
HMGB1P20-201ENST00000402555 TGM3Q08188 693 aa5.38□□□□□ -1.55
HMGB1P20-201ENST00000402555 TRAF3Q13114 568 aa5.38□□□□□ -1.55
HMGB1P20-201ENST00000402555 ELOAQ14241 798 aaKnown RBP5.38□□□□□ -1.55
HMGB1P20-201ENST00000402555 SLC29A2Q14542 456 aa5.38□□□□□ -1.55
HMGB1P20-201ENST00000402555 OR1C1Q15619 314 aa5.38□□□□□ -1.55
HMGB1P20-201ENST00000402555 ZRSR2Q15696 482 aaKnown RBP5.38□□□□□ -1.55
HMGB1P20-201ENST00000402555 MEP1AQ16819 746 aa5.38□□□□□ -1.55
HMGB1P20-201ENST00000402555 AP5B1Q2VPB7 878 aa5.38□□□□□ -1.55
HMGB1P20-201ENST00000402555 ZNF766Q5HY98 468 aa5.38□□□□□ -1.55
HMGB1P20-201ENST00000402555 TEX35Q5T0J7 233 aa5.38□□□□□ -1.55
HMGB1P20-201ENST00000402555 DEPDC1Q5TB30 811 aa5.38□□□□□ -1.55
HMGB1P20-201ENST00000402555 C18orf63Q68DL7 685 aa5.38□□□□□ -1.55
HMGB1P20-201ENST00000402555 ZNF324BQ6AW86 544 aaPredicted RBP5.38□□□□□ -1.55
HMGB1P20-201ENST00000402555 OR4C11Q6IEV9 310 aa5.38□□□□□ -1.55
HMGB1P20-201ENST00000402555 RPUSD3Q6P087 351 aaKnown RBP5.38□□□□□ -1.55
HMGB1P20-201ENST00000402555 TRMT10CQ7L0Y3 403 aaKnown RBP5.38□□□□□ -1.55
HMGB1P20-201ENST00000402555 CCDC91Q7Z6B0 441 aa5.38□□□□□ -1.55
HMGB1P20-201ENST00000402555 ZNF227Q86WZ6 799 aa5.38□□□□□ -1.55
HMGB1P20-201ENST00000402555 OR4N5Q8IXE1 308 aa5.38□□□□□ -1.55
HMGB1P20-201ENST00000402555 ZNF595Q8IYB9 648 aa5.38□□□□□ -1.55
HMGB1P20-201ENST00000402555 SLC5A8Q8N695 610 aa5.38□□□□□ -1.55
HMGB1P20-201ENST00000402555 BCORP1Q8N888 145 aa5.38□□□□□ -1.55
HMGB1P20-201ENST00000402555 ZNF321PQ8N8H1 164 aa5.38□□□□□ -1.55
HMGB1P20-201ENST00000402555 APCDD1LQ8NCL9 501 aa5.38□□□□□ -1.55
HMGB1P20-201ENST00000402555 ST6GALNAC3Q8NDV1 305 aa5.38□□□□□ -1.55
HMGB1P20-201ENST00000402555 MDS2Q8NDY4 140 aa5.38□□□□□ -1.55
HMGB1P20-201ENST00000402555 B3GNT7Q8NFL0 401 aa5.38□□□□□ -1.55
HMGB1P20-201ENST00000402555 SUN3Q8TAQ9 357 aa5.38□□□□□ -1.55
HMGB1P20-201ENST00000402555 DOK4Q8TEW6 326 aa5.38□□□□□ -1.55
HMGB1P20-201ENST00000402555 SSC4DQ8WTU2 575 aa5.38□□□□□ -1.55
HMGB1P20-201ENST00000402555 UCN3Q969E3 161 aa5.38□□□□□ -1.55
HMGB1P20-201ENST00000402555 UBE2E3Q969T4 207 aa5.38□□□□□ -1.55
HMGB1P20-201ENST00000402555 NCLNQ969V3 563 aa5.38□□□□□ -1.55
HMGB1P20-201ENST00000402555 ATP6V1E2Q96A05 226 aa5.38□□□□□ -1.55
HMGB1P20-201ENST00000402555 CMTM7Q96FZ5 175 aa5.38□□□□□ -1.55
HMGB1P20-201ENST00000402555 PSMG3-AS1Q96PY0 264 aa5.38□□□□□ -1.55
HMGB1P20-201ENST00000402555 SLX1AQ9BQ83 275 aa5.38□□□□□ -1.55
HMGB1P20-201ENST00000402555 UTP23Q9BRU9 249 aaKnown RBP5.38□□□□□ -1.55
HMGB1P20-201ENST00000402555 TBCDQ9BTW9 1192 aa5.38□□□□□ -1.55
HMGB1P20-201ENST00000402555 ALOXE3Q9BYJ1 711 aa5.38□□□□□ -1.55
HMGB1P20-201ENST00000402555 DEFB126Q9BYW3 111 aa5.38□□□□□ -1.55
HMGB1P20-201ENST00000402555 TXLNGYQ9BZA5 131 aa5.38□□□□□ -1.55
HMGB1P20-201ENST00000402555 TSPAN10Q9H1Z9 355 aaPredicted RBP5.38□□□□□ -1.55
HMGB1P20-201ENST00000402555 NOL11Q9H8H0 719 aaKnown RBP5.38□□□□□ -1.55
HMGB1P20-201ENST00000402555 LIN28AQ9H9Z2 209 aaKnown RBP5.38□□□□□ -1.55
HMGB1P20-201ENST00000402555 ZBTB26Q9HCK0 441 aa5.38□□□□□ -1.55
HMGB1P20-201ENST00000402555 SEMA4BQ9NPR2 832 aaPredicted RBP5.38□□□□□ -1.55
HMGB1P20-201ENST00000402555 OLAHQ9NV23 265 aa5.38□□□□□ -1.55
HMGB1P20-201ENST00000402555 KCMF1Q9P0J7 381 aa5.38□□□□□ -1.55
HMGB1P20-201ENST00000402555 TBK1Q9UHD2 729 aa5.38□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms