RNA–Protein interactions for RNA: ENST00000400555.7

PPP4R1-202, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PPP4R1, Length 3,885 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-202ENST00000400555 ACP5P13686 325 aa12.08□□□□□ -0.48
PPP4R1-202ENST00000400555 JUNDP17535 347 aa12.08□□□□□ -0.48
PPP4R1-202ENST00000400555 SLC6A11P48066 632 aa12.08□□□□□ -0.48
PPP4R1-202ENST00000400555 RAB25P57735 213 aa12.08□□□□□ -0.48
PPP4R1-202ENST00000400555 FAM131AQ6UXB0 335 aa12.08□□□□□ -0.48
PPP4R1-202ENST00000400555 B3GLCTQ6Y288 498 aa12.08□□□□□ -0.48
PPP4R1-202ENST00000400555 C6orf120Q7Z4R8 191 aa12.08□□□□□ -0.48
PPP4R1-202ENST00000400555 KRT78Q8N1N4 520 aa12.08□□□□□ -0.48
PPP4R1-202ENST00000400555 OXR1Q8N573 874 aa12.08□□□□□ -0.48
PPP4R1-202ENST00000400555 SLC43A3Q8NBI5 491 aa12.08□□□□□ -0.48
PPP4R1-202ENST00000400555 VN1R2Q8NFZ6 395 aa12.08□□□□□ -0.48
PPP4R1-202ENST00000400555 ECHDC3Q96DC8 303 aa12.08□□□□□ -0.48
PPP4R1-202ENST00000400555 TRNT1Q96Q11 434 aaKnown RBP12.08□□□□□ -0.48
PPP4R1-202ENST00000400555 EFCAB11Q9BUY7 163 aa12.08□□□□□ -0.48
PPP4R1-202ENST00000400555 EHD1Q9H4M9 534 aa12.08□□□□□ -0.48
PPP4R1-202ENST00000400555 KCNK6Q9Y257 313 aa12.08□□□□□ -0.48
PPP4R1-202ENST00000400555 H0YIV9 168 aa12.07□□□□□ -0.48
PPP4R1-202ENST00000400555 EPCAMP16422 314 aa12.07□□□□□ -0.48
PPP4R1-202ENST00000400555 TGFBR2P37173 567 aa12.07□□□□□ -0.48
PPP4R1-202ENST00000400555 PNLIPRP1P54315 467 aa12.07□□□□□ -0.48
PPP4R1-202ENST00000400555 CXCR4P61073 352 aa12.07□□□□□ -0.48
PPP4R1-202ENST00000400555 SLC7A9P82251 487 aa12.07□□□□□ -0.48
PPP4R1-202ENST00000400555 FAM214AQ32MH5 1076 aa12.07□□□□□ -0.48
PPP4R1-202ENST00000400555 CCDC92Q53HC0 331 aaPredicted RBP12.07□□□□□ -0.48
PPP4R1-202ENST00000400555 FRMPD2BQ6IN97 320 aa12.07□□□□□ -0.48
PPP4R1-202ENST00000400555 REEP3Q6NUK4 255 aa12.07□□□□□ -0.48
PPP4R1-202ENST00000400555 NXPE4Q6UWF7 544 aa12.07□□□□□ -0.48
PPP4R1-202ENST00000400555 METTL4Q8N3J2 472 aa12.07□□□□□ -0.48
PPP4R1-202ENST00000400555 EPYCQ99645 322 aa12.07□□□□□ -0.48
PPP4R1-202ENST00000400555 ZCCHC2Q9C0B9 1178 aaKnown RBP12.07□□□□□ -0.48
PPP4R1-202ENST00000400555 RHBGQ9H310 441 aa12.07□□□□□ -0.48
PPP4R1-202ENST00000400555 COMMD3Q9UBI1 195 aa12.07□□□□□ -0.48
PPP4R1-202ENST00000400555 STOML2Q9UJZ1 356 aa12.07□□□□□ -0.48
PPP4R1-202ENST00000400555 OR1A2Q9Y585 309 aa12.07□□□□□ -0.48
PPP4R1-202ENST00000400555 ARHGAP33O14559 1287 aa12.07□□□□□ -0.48
PPP4R1-202ENST00000400555 SLC16A5O15375 505 aa12.07□□□□□ -0.48
PPP4R1-202ENST00000400555 PDPK1O15530 556 aa12.07□□□□□ -0.48
PPP4R1-202ENST00000400555 GPR37L1O60883 481 aa12.07□□□□□ -0.48
PPP4R1-202ENST00000400555 PSIP1O75475 530 aaKnown RBP12.07□□□□□ -0.48
PPP4R1-202ENST00000400555 UGT2B17O75795 530 aa12.07□□□□□ -0.48
PPP4R1-202ENST00000400555 FURINP09958 794 aa12.07□□□□□ -0.48
PPP4R1-202ENST00000400555 C6P13671 934 aa12.07□□□□□ -0.48
PPP4R1-202ENST00000400555 PSMA1P25786 263 aaKnown RBP12.07□□□□□ -0.48
PPP4R1-202ENST00000400555 PSMA3P25788 255 aa12.07□□□□□ -0.48
PPP4R1-202ENST00000400555 SPRED2Q7Z698 418 aa12.07□□□□□ -0.48
PPP4R1-202ENST00000400555 LYSMD1Q96S90 227 aa12.07□□□□□ -0.48
PPP4R1-202ENST00000400555 UCK2Q9BZX2 261 aa12.07□□□□□ -0.48
PPP4R1-202ENST00000400555 TBC1D17Q9HA65 648 aa12.07□□□□□ -0.48
PPP4R1-202ENST00000400555 ACER3Q9NUN7 267 aa12.07□□□□□ -0.48
PPP4R1-202ENST00000400555 BTNL2Q9UIR0 455 aa12.07□□□□□ -0.48
PPP4R1-202ENST00000400555 PCDHGB6Q9Y5F9 930 aa12.07□□□□□ -0.48
PPP4R1-202ENST00000400555 ENPP4Q9Y6X5 453 aa12.07□□□□□ -0.48
PPP4R1-202ENST00000400555 PRAMEF25A6NGN4 478 aa12.07□□□□□ -0.48
PPP4R1-202ENST00000400555 LATS1O95835 1130 aa12.07□□□□□ -0.48
PPP4R1-202ENST00000400555 EIF2DP41214 584 aaKnown RBP12.07□□□□□ -0.48
PPP4R1-202ENST00000400555 CCT3P49368 545 aaKnown RBP12.07□□□□□ -0.48
PPP4R1-202ENST00000400555 C1DQ13901 141 aaKnown RBP12.07□□□□□ -0.48
PPP4R1-202ENST00000400555 PRSS53Q2L4Q9 553 aa12.07□□□□□ -0.48
PPP4R1-202ENST00000400555 FAHD1Q6P587 224 aa12.07□□□□□ -0.48
PPP4R1-202ENST00000400555 CNKSR3Q6P9H4 555 aa12.07□□□□□ -0.48
PPP4R1-202ENST00000400555 IQCHQ86VS3 1027 aa12.07□□□□□ -0.48
PPP4R1-202ENST00000400555 CCDC116Q8IYX3 515 aa12.07□□□□□ -0.48
PPP4R1-202ENST00000400555 ZNF614Q8N883 585 aa12.07□□□□□ -0.48
PPP4R1-202ENST00000400555 PUM2Q8TB72 1066 aaKnown RBP eCLIP12.07□□□□□ -0.482e-13■■■■■ 63.1
PPP4R1-202ENST00000400555 SLC38A5Q8WUX1 472 aa12.07□□□□□ -0.48
PPP4R1-202ENST00000400555 DIRAS2Q96HU8 199 aa12.07□□□□□ -0.48
PPP4R1-202ENST00000400555 CDADC1Q9BWV3 514 aa12.07□□□□□ -0.48
PPP4R1-202ENST00000400555 CPEB1Q9BZB8 566 aaKnown RBP12.07□□□□□ -0.48
PPP4R1-202ENST00000400555 EXO1Q9UQ84 846 aaKnown RBP12.07□□□□□ -0.48
PPP4R1-202ENST00000400555 B3GNT3Q9Y2A9 372 aa12.07□□□□□ -0.48
PPP4R1-202ENST00000400555 HSPE1-MOB4S4R3N1 261 aa12.07□□□□□ -0.48
PPP4R1-202ENST00000400555 SCN3AQ9NY46 2000 aa12.06□□□□□ -0.48
PPP4R1-202ENST00000400555 ASCC3Q8N3C0 2202 aaKnown RBP12.06□□□□□ -0.48
PPP4R1-202ENST00000400555 FKTNO75072 461 aa12.06□□□□□ -0.48
PPP4R1-202ENST00000400555 H1F0P07305 194 aaKnown RBP12.06□□□□□ -0.48
PPP4R1-202ENST00000400555 TCEA1P23193 301 aaKnown RBP12.06□□□□□ -0.48
PPP4R1-202ENST00000400555 SLC15A1P46059 708 aa12.06□□□□□ -0.48
PPP4R1-202ENST00000400555 SF3B4Q15427 424 aaKnown RBP eCLIP12.06□□□□□ -0.487e-7■■■■■ 28.3
PPP4R1-202ENST00000400555 ZMAT1Q5H9K5 638 aa12.06□□□□□ -0.48
PPP4R1-202ENST00000400555 CRB2Q5IJ48 1285 aa12.06□□□□□ -0.48
PPP4R1-202ENST00000400555 HENMT1Q5T8I9 393 aaKnown RBP12.06□□□□□ -0.48
PPP4R1-202ENST00000400555 C22orf42Q6IC83 251 aa12.06□□□□□ -0.48
PPP4R1-202ENST00000400555 TMPRSS11AQ6ZMR5 421 aa12.06□□□□□ -0.48
PPP4R1-202ENST00000400555 SLC46A3Q7Z3Q1 461 aa12.06□□□□□ -0.48
PPP4R1-202ENST00000400555 LHFPL3Q86UP9 236 aa12.06□□□□□ -0.48
PPP4R1-202ENST00000400555 AMZ2Q86W34 360 aa12.06□□□□□ -0.48
PPP4R1-202ENST00000400555 CPXM2Q8N436 756 aa12.06□□□□□ -0.48
PPP4R1-202ENST00000400555 CXorf40AQ8TE69 158 aa12.06□□□□□ -0.48
PPP4R1-202ENST00000400555 SLC9A6Q92581 669 aa12.06□□□□□ -0.48
PPP4R1-202ENST00000400555 FCGR1BQ92637 280 aa12.06□□□□□ -0.48
PPP4R1-202ENST00000400555 RAD51AP1Q96B01 352 aa12.06□□□□□ -0.48
PPP4R1-202ENST00000400555 TBX5Q99593 518 aa12.06□□□□□ -0.48
PPP4R1-202ENST00000400555 YARS2Q9Y2Z4 477 aaKnown RBP12.06□□□□□ -0.48
PPP4R1-202ENST00000400555 GSAPA4D1B5 854 aa12.06□□□□□ -0.48
PPP4R1-202ENST00000400555 NTN1O95631 604 aa12.06□□□□□ -0.48
PPP4R1-202ENST00000400555 PAK4O96013 591 aaPredicted RBP12.06□□□□□ -0.48
PPP4R1-202ENST00000400555 PTPN2P17706 415 aa12.06□□□□□ -0.48
PPP4R1-202ENST00000400555 AVPR1BP47901 424 aa12.06□□□□□ -0.48
PPP4R1-202ENST00000400555 OR2B6P58173 313 aa12.06□□□□□ -0.48
PPP4R1-202ENST00000400555 MPEG1Q2M385 716 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms