RNA–Protein interactions for RNA: ENST00000399638.5

CACNA1C-216, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 6,595 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-216ENST00000399638 DEFB110Q30KQ9 67 aa10.55□□□□□ -0.72
CACNA1C-216ENST00000399638 CNPY1Q3B7I2 92 aa10.55□□□□□ -0.72
CACNA1C-216ENST00000399638 LRP10Q7Z4F1 713 aa10.55□□□□□ -0.72
CACNA1C-216ENST00000399638 OR2T3Q8NH03 318 aa10.55□□□□□ -0.72
CACNA1C-216ENST00000399638 C10orf82Q8WW14 230 aa10.55□□□□□ -0.72
CACNA1C-216ENST00000399638 WDR6Q9NNW5 1121 aaKnown RBP10.55□□□□□ -0.72
CACNA1C-216ENST00000399638 BAZ2BQ9UIF8 2168 aaKnown RBP10.55□□□□□ -0.72
CACNA1C-216ENST00000399638 FMN2Q9NZ56 1722 aa10.55□□□□□ -0.72
CACNA1C-216ENST00000399638 LOC105378220A0A1B0GUY1 285 aaPredicted RBP10.55□□□□□ -0.72
CACNA1C-216ENST00000399638 hCG_2039718K7EN88 272 aa10.55□□□□□ -0.72
CACNA1C-216ENST00000399638 FZD9O00144 591 aa10.55□□□□□ -0.72
CACNA1C-216ENST00000399638 B4GAT1O43505 415 aa10.55□□□□□ -0.72
CACNA1C-216ENST00000399638 TRMUO75648 421 aaKnown RBP10.55□□□□□ -0.72
CACNA1C-216ENST00000399638 ESR1P03372 595 aa10.55□□□□□ -0.72
CACNA1C-216ENST00000399638 SFTPBP07988 381 aa10.55□□□□□ -0.72
CACNA1C-216ENST00000399638 SPATA31C1P0DKV0 1188 aa10.55□□□□□ -0.72
CACNA1C-216ENST00000399638 AOC1P19801 751 aa10.55□□□□□ -0.72
CACNA1C-216ENST00000399638 SFTPDP35247 375 aa10.55□□□□□ -0.72
CACNA1C-216ENST00000399638 HSD17B7P56937 341 aa10.55□□□□□ -0.72
CACNA1C-216ENST00000399638 POU6F2P78424 691 aaPredicted RBP10.55□□□□□ -0.72
CACNA1C-216ENST00000399638 ENPP6Q6UWR7 440 aa10.55□□□□□ -0.72
CACNA1C-216ENST00000399638 C1orf127Q8N9H9 656 aa10.55□□□□□ -0.72
CACNA1C-216ENST00000399638 OR10T2Q8NGX3 314 aa10.55□□□□□ -0.72
CACNA1C-216ENST00000399638 PPP1R35Q8TAP8 253 aa10.55□□□□□ -0.72
CACNA1C-216ENST00000399638 DOK4Q8TEW6 326 aa10.55□□□□□ -0.72
CACNA1C-216ENST00000399638 DDX1Q92499 740 aaKnown RBP10.55□□□□□ -0.72
CACNA1C-216ENST00000399638 CASD1Q96PB1 797 aa10.55□□□□□ -0.72
CACNA1C-216ENST00000399638 TPPP3Q9BW30 176 aa10.55□□□□□ -0.72
CACNA1C-216ENST00000399638 MND1Q9BWT6 205 aa10.55□□□□□ -0.72
CACNA1C-216ENST00000399638 GNB4Q9HAV0 340 aa10.55□□□□□ -0.72
CACNA1C-216ENST00000399638 CHRAC1Q9NRG0 131 aa10.55□□□□□ -0.72
CACNA1C-216ENST00000399638 OR1A2Q9Y585 309 aa10.55□□□□□ -0.72
CACNA1C-216ENST00000399638 MAFBQ9Y5Q3 323 aaPredicted RBP10.55□□□□□ -0.72
CACNA1C-216ENST00000399638 BCAT2O15382 392 aaPredicted RBP10.55□□□□□ -0.72
CACNA1C-216ENST00000399638 YY2O15391 372 aa10.55□□□□□ -0.72
CACNA1C-216ENST00000399638 LYPLA2O95372 231 aa10.55□□□□□ -0.72
CACNA1C-216ENST00000399638 DCNP07585 359 aaKnown RBP10.55□□□□□ -0.72
CACNA1C-216ENST00000399638 EDN3P14138 238 aa10.55□□□□□ -0.72
CACNA1C-216ENST00000399638 S100PP25815 95 aa10.55□□□□□ -0.72
CACNA1C-216ENST00000399638 LGALS4P56470 323 aa10.55□□□□□ -0.72
CACNA1C-216ENST00000399638 NPY5RQ15761 445 aa10.55□□□□□ -0.72
CACNA1C-216ENST00000399638 CLEC6AQ6EIG7 209 aa10.55□□□□□ -0.72
CACNA1C-216ENST00000399638 KBTBD8Q8NFY9 601 aa10.55□□□□□ -0.72
CACNA1C-216ENST00000399638 SLC35A5Q9BS91 424 aa10.55□□□□□ -0.72
CACNA1C-216ENST00000399638 MTMR11A4FU01 709 aa10.55□□□□□ -0.72
CACNA1C-216ENST00000399638 RFXAPO00287 272 aa10.55□□□□□ -0.72
CACNA1C-216ENST00000399638 H2BFMP0C1H6 154 aa10.55□□□□□ -0.72
CACNA1C-216ENST00000399638 C5AR1P21730 350 aa10.55□□□□□ -0.72
CACNA1C-216ENST00000399638 L1CAMP32004 1257 aa10.55□□□□□ -0.72
CACNA1C-216ENST00000399638 GABRB2P47870 512 aa10.55□□□□□ -0.72
CACNA1C-216ENST00000399638 RPL11P62913 178 aaKnown RBP10.55□□□□□ -0.72
CACNA1C-216ENST00000399638 TUBA4AP68366 448 aa10.55□□□□□ -0.72
CACNA1C-216ENST00000399638 TLE1Q04724 770 aa10.55□□□□□ -0.72
CACNA1C-216ENST00000399638 PMPCAQ10713 525 aa10.55□□□□□ -0.72
CACNA1C-216ENST00000399638 CATSPEREQ5SY80 951 aa10.55□□□□□ -0.72
CACNA1C-216ENST00000399638 TSTD2Q5T7W7 516 aa10.55□□□□□ -0.72
CACNA1C-216ENST00000399638 ADGRD1Q6QNK2 874 aa10.55□□□□□ -0.72
CACNA1C-216ENST00000399638 RBM44Q6ZP01 1051 aaKnown RBP10.55□□□□□ -0.72
CACNA1C-216ENST00000399638 OR6Q1Q8NGQ2 317 aa10.55□□□□□ -0.72
CACNA1C-216ENST00000399638 SCGB1C1Q8TD33 95 aa10.55□□□□□ -0.72
CACNA1C-216ENST00000399638 RAB7BQ96AH8 199 aa10.55□□□□□ -0.72
CACNA1C-216ENST00000399638 TMEM41AQ96HV5 264 aa10.55□□□□□ -0.72
CACNA1C-216ENST00000399638 GAREM1Q9H706 876 aa10.55□□□□□ -0.72
CACNA1C-216ENST00000399638 KAT8Q9H7Z6 458 aaKnown RBP10.55□□□□□ -0.72
CACNA1C-216ENST00000399638 RGPD1P0DJD0 1748 aa10.55□□□□□ -0.72
CACNA1C-216ENST00000399638 NPIPA7E9PJI5 369 aa10.55□□□□□ -0.72
CACNA1C-216ENST00000399638 NPIPA8P0DM63 369 aa10.55□□□□□ -0.72
CACNA1C-216ENST00000399638 MELKQ14680 651 aa10.55□□□□□ -0.72
CACNA1C-216ENST00000399638 SYT16Q17RD7 645 aa10.55□□□□□ -0.72
CACNA1C-216ENST00000399638 RBM20Q5T481 1227 aaKnown RBP10.55□□□□□ -0.72
CACNA1C-216ENST00000399638 AMIGO2Q86SJ2 522 aa10.55□□□□□ -0.72
CACNA1C-216ENST00000399638 DCUN1D3Q8IWE4 304 aa10.55□□□□□ -0.72
CACNA1C-216ENST00000399638 ZC3H3Q8IXZ2 948 aaKnown RBP10.55□□□□□ -0.72
CACNA1C-216ENST00000399638 DDIT4LQ96D03 193 aa10.55□□□□□ -0.72
CACNA1C-216ENST00000399638 CPXM1Q96SM3 734 aa10.55□□□□□ -0.72
CACNA1C-216ENST00000399638 DUSP26Q9BV47 211 aa10.55□□□□□ -0.72
CACNA1C-216ENST00000399638 RHOJQ9H4E5 214 aa10.55□□□□□ -0.72
CACNA1C-216ENST00000399638 PCTPQ9UKL6 214 aa10.55□□□□□ -0.72
CACNA1C-216ENST00000399638 PEAK1Q9H792 1746 aa10.55□□□□□ -0.72
CACNA1C-216ENST00000399638 TEX13DA0A0J9YY54 714 aaPredicted RBP10.55□□□□□ -0.72
CACNA1C-216ENST00000399638 ITGA10O75578 1167 aa10.55□□□□□ -0.72
CACNA1C-216ENST00000399638 CD6P30203 668 aa10.55□□□□□ -0.72
CACNA1C-216ENST00000399638 THBS2P35442 1172 aa10.55□□□□□ -0.72
CACNA1C-216ENST00000399638 GRIA1P42261 906 aa10.55□□□□□ -0.72
CACNA1C-216ENST00000399638 ARSFP54793 590 aa10.55□□□□□ -0.72
CACNA1C-216ENST00000399638 AP3S2P59780 193 aa10.55□□□□□ -0.72
CACNA1C-216ENST00000399638 NTHL1P78549 312 aa10.55□□□□□ -0.72
CACNA1C-216ENST00000399638 ARHGAP1Q07960 439 aa10.55□□□□□ -0.72
CACNA1C-216ENST00000399638 Q6ZSR6 202 aa10.55□□□□□ -0.72
CACNA1C-216ENST00000399638 ASRGL1Q7L266 308 aa10.55□□□□□ -0.72
CACNA1C-216ENST00000399638 PQLC1Q8N2U9 271 aa10.55□□□□□ -0.72
CACNA1C-216ENST00000399638 TRGV8A0A0C4DH27 118 aa10.54□□□□□ -0.72
CACNA1C-216ENST00000399638 CCNE2O96020 404 aa10.54□□□□□ -0.72
CACNA1C-216ENST00000399638 BCHEP06276 602 aa10.54□□□□□ -0.72
CACNA1C-216ENST00000399638 C2P06681 752 aa10.54□□□□□ -0.72
CACNA1C-216ENST00000399638 OR12D1P0DN82 309 aa10.54□□□□□ -0.72
CACNA1C-216ENST00000399638 VAMP1P23763 118 aa10.54□□□□□ -0.72
CACNA1C-216ENST00000399638 MAOBP27338 520 aa10.54□□□□□ -0.72
CACNA1C-216ENST00000399638 MSX2P35548 267 aaPredicted RBP10.54□□□□□ -0.72
CACNA1C-216ENST00000399638 CDK9P50750 372 aaKnown RBP10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms