RNA–Protein interactions for RNA: ENST00000398137.5

U2AF1-203, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best) BASIC

Gene U2AF1, Length 1,019 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-203ENST00000398137 RBMXL3Q8N7X1 1067 aaKnown RBP23.91■■□□□ 1.42
U2AF1-203ENST00000398137 Q8NA96 180 aa23.91■■□□□ 1.42
U2AF1-203ENST00000398137 CHTF18Q8WVB6 975 aa23.91■■□□□ 1.42
U2AF1-203ENST00000398137 CKAP2Q8WWK9 683 aa23.91■■□□□ 1.42
U2AF1-203ENST00000398137 TBC1D20Q96BZ9 403 aa23.91■■□□□ 1.42
U2AF1-203ENST00000398137 OR1F2PQ96R84 312 aa23.91■■□□□ 1.42
U2AF1-203ENST00000398137 CSF3RQ99062 836 aa23.91■■□□□ 1.42
U2AF1-203ENST00000398137 SMAD5Q99717 465 aaKnown RBP23.91■■□□□ 1.42
U2AF1-203ENST00000398137 LYRM4Q9HD34 91 aa23.91■■□□□ 1.42
U2AF1-203ENST00000398137 LANCL2Q9NS86 450 aa23.91■■□□□ 1.42
U2AF1-203ENST00000398137 MARCOQ9UEW3 520 aaPredicted RBP23.91■■□□□ 1.42
U2AF1-203ENST00000398137 FBXW2Q9UKT8 454 aa23.91■■□□□ 1.42
U2AF1-203ENST00000398137 DAPP1Q9UN19 280 aa23.91■■□□□ 1.42
U2AF1-203ENST00000398137 CCL27Q9Y4X3 112 aa23.91■■□□□ 1.42
U2AF1-203ENST00000398137 DOPEY2Q9Y3R5 2298 aa23.91■■□□□ 1.42
U2AF1-203ENST00000398137 RGS14O43566 566 aa23.9■■□□□ 1.42
U2AF1-203ENST00000398137 B4GALT2O60909 372 aa23.9■■□□□ 1.42
U2AF1-203ENST00000398137 JUNP05412 331 aaKnown RBP23.9■■□□□ 1.42
U2AF1-203ENST00000398137 TPP2P29144 1249 aaPredicted RBP23.9■■□□□ 1.42
U2AF1-203ENST00000398137 HNRNPH2P55795 449 aaKnown RBP23.9■■□□□ 1.42
U2AF1-203ENST00000398137 NR6A1Q15406 480 aa23.9■■□□□ 1.42
U2AF1-203ENST00000398137 SPIN4Q56A73 249 aa23.9■■□□□ 1.42
U2AF1-203ENST00000398137 DCAF10Q5QP82 559 aa23.9■■□□□ 1.42
U2AF1-203ENST00000398137 HOMEZQ8IX15 550 aa23.9■■□□□ 1.42
U2AF1-203ENST00000398137 KIRREL3Q8IZU9 778 aa23.9■■□□□ 1.42
U2AF1-203ENST00000398137 P4HTMQ9NXG6 502 aa23.9■■□□□ 1.42
U2AF1-203ENST00000398137 KCMF1Q9P0J7 381 aa23.9■■□□□ 1.42
U2AF1-203ENST00000398137 C3orf18Q9UK00 162 aa23.9■■□□□ 1.42
U2AF1-203ENST00000398137 ADAM29Q9UKF5 820 aa23.9■■□□□ 1.42
U2AF1-203ENST00000398137 MKL2Q9ULH7 1088 aa23.9■■□□□ 1.42
U2AF1-203ENST00000398137 ZNF451Q9Y4E5 1061 aa23.9■■□□□ 1.42
U2AF1-203ENST00000398137 PCDHGB7Q9Y5F8 929 aa23.9■■□□□ 1.42
U2AF1-203ENST00000398137 PTPN13Q12923 2485 aa23.9■■□□□ 1.42
U2AF1-203ENST00000398137 ARHGAP10A1A4S6 786 aa23.89■■□□□ 1.41
U2AF1-203ENST00000398137 OR2W5A6NFC9 320 aa23.89■■□□□ 1.41
U2AF1-203ENST00000398137 HEXBP07686 556 aa23.89■■□□□ 1.41
U2AF1-203ENST00000398137 IL10P22301 178 aa23.89■■□□□ 1.41
U2AF1-203ENST00000398137 EFNA3P52797 238 aa23.89■■□□□ 1.41
U2AF1-203ENST00000398137 RRADP55042 308 aa23.89■■□□□ 1.41
U2AF1-203ENST00000398137 XKR7Q5GH72 579 aa23.89■■□□□ 1.41
U2AF1-203ENST00000398137 CCNYL2Q5T2Q4 361 aa23.89■■□□□ 1.41
U2AF1-203ENST00000398137 Q6ZSR9 355 aa23.89■■□□□ 1.41
U2AF1-203ENST00000398137 ADAMTS18Q8TE60 1221 aa23.89■■□□□ 1.41
U2AF1-203ENST00000398137 C19orf60Q96EN9 201 aa23.89■■□□□ 1.41
U2AF1-203ENST00000398137 PPP1R36Q96LQ0 422 aa23.89■■□□□ 1.41
U2AF1-203ENST00000398137 MAGEB18Q96M61 343 aa23.89■■□□□ 1.41
U2AF1-203ENST00000398137 VN1R1Q9GZP7 353 aa23.89■■□□□ 1.41
U2AF1-203ENST00000398137 LRTM1Q9HBL6 345 aa23.89■■□□□ 1.41
U2AF1-203ENST00000398137 SLCO1B3Q9NPD5 702 aa23.89■■□□□ 1.41
U2AF1-203ENST00000398137 LYARQ9NX58 379 aaKnown RBP23.89■■□□□ 1.41
U2AF1-203ENST00000398137 GPR83Q9NYM4 423 aa23.89■■□□□ 1.41
U2AF1-203ENST00000398137 DOCK10Q96BY6 2186 aa23.88■■□□□ 1.41
U2AF1-203ENST00000398137 IDSB3KWA1 339 aa23.88■■□□□ 1.41
U2AF1-203ENST00000398137 PCDH7O60245 1069 aa23.88■■□□□ 1.41
U2AF1-203ENST00000398137 FAM58BPP0C7Q3 252 aa23.88■■□□□ 1.41
U2AF1-203ENST00000398137 KITP10721 976 aa23.88■■□□□ 1.41
U2AF1-203ENST00000398137 JAK1P23458 1154 aa23.88■■□□□ 1.41
U2AF1-203ENST00000398137 MAPK12P53778 367 aa23.88■■□□□ 1.41
U2AF1-203ENST00000398137 TUBB8Q3ZCM7 444 aa23.88■■□□□ 1.41
U2AF1-203ENST00000398137 MRM1Q6IN84 353 aaKnown RBP23.88■■□□□ 1.41
U2AF1-203ENST00000398137 JMJD6Q6NYC1 403 aaPredicted RBP23.88■■□□□ 1.41
U2AF1-203ENST00000398137 GPR180Q86V85 440 aa23.88■■□□□ 1.41
U2AF1-203ENST00000398137 TMEM52Q8NDY8 209 aa23.88■■□□□ 1.41
U2AF1-203ENST00000398137 FAM76AQ8TAV0 307 aa23.88■■□□□ 1.41
U2AF1-203ENST00000398137 C3orf30Q96M34 536 aa23.88■■□□□ 1.41
U2AF1-203ENST00000398137 IP6K3Q96PC2 410 aa23.88■■□□□ 1.41
U2AF1-203ENST00000398137 EBPLQ9BY08 206 aa23.88■■□□□ 1.41
U2AF1-203ENST00000398137 LUZP4Q9P127 313 aa23.88■■□□□ 1.41
U2AF1-203ENST00000398137 GIMAP2Q9UG22 337 aa23.88■■□□□ 1.41
U2AF1-203ENST00000398137 PHF11Q9UIL8 331 aa23.88■■□□□ 1.41
U2AF1-203ENST00000398137 ATG4BQ9Y4P1 393 aa23.88■■□□□ 1.41
U2AF1-203ENST00000398137 SPACA6W5XKT8 324 aa23.88■■□□□ 1.41
U2AF1-203ENST00000398137 ATP6AP2A0A1C7CYW4 349 aa23.87■■□□□ 1.41
U2AF1-203ENST00000398137 CYR61O00622 381 aa23.87■■□□□ 1.41
U2AF1-203ENST00000398137 ATP6AP2O75787 350 aa23.87■■□□□ 1.41
U2AF1-203ENST00000398137 CPN2P22792 545 aa23.87■■□□□ 1.41
U2AF1-203ENST00000398137 TIA1P31483 386 aaKnown RBP eCLIP23.87■■□□□ 1.41
U2AF1-203ENST00000398137 HNRNPFP52597 415 aaKnown RBP23.87■■□□□ 1.41
U2AF1-203ENST00000398137 EMP2P54851 167 aa23.87■■□□□ 1.41
U2AF1-203ENST00000398137 RAE1P78406 368 aaKnown RBP23.87■■□□□ 1.41
U2AF1-203ENST00000398137 PRR30Q53SZ7 412 aaPredicted RBP23.87■■□□□ 1.41
U2AF1-203ENST00000398137 FAAH2Q6GMR7 532 aa23.87■■□□□ 1.41
U2AF1-203ENST00000398137 C7orf26Q96N11 449 aa23.87■■□□□ 1.41
U2AF1-203ENST00000398137 MESP1Q9BRJ9 268 aa23.87■■□□□ 1.41
U2AF1-203ENST00000398137 MFRPQ9BY79 579 aa23.87■■□□□ 1.41
U2AF1-203ENST00000398137 ZNF552Q9H707 407 aaPredicted RBP23.87■■□□□ 1.41
U2AF1-203ENST00000398137 C1orf109Q9NX04 203 aa23.87■■□□□ 1.41
U2AF1-203ENST00000398137 ASB4Q9Y574 426 aa23.87■■□□□ 1.41
U2AF1-203ENST00000398137 TTLL8A6PVC2 850 aa23.86■■□□□ 1.41
U2AF1-203ENST00000398137 SOCS6O14544 535 aa23.86■■□□□ 1.41
U2AF1-203ENST00000398137 LSM1O15116 133 aaKnown RBP23.86■■□□□ 1.41
U2AF1-203ENST00000398137 SEC22BO75396 215 aa23.86■■□□□ 1.41
U2AF1-203ENST00000398137 PRKRAO75569 313 aaKnown RBP23.86■■□□□ 1.41
U2AF1-203ENST00000398137 PRPH2P23942 346 aa23.86■■□□□ 1.41
U2AF1-203ENST00000398137 UQCRFS1P47985 274 aa23.86■■□□□ 1.41
U2AF1-203ENST00000398137 RPL38P63173 70 aaKnown RBP23.86■■□□□ 1.41
U2AF1-203ENST00000398137 RHAGQ02094 409 aa23.86■■□□□ 1.41
U2AF1-203ENST00000398137 TNFRSF17Q02223 184 aa23.86■■□□□ 1.41
U2AF1-203ENST00000398137 GALNTL6Q49A17 601 aa23.86■■□□□ 1.41
U2AF1-203ENST00000398137 C18orf63Q68DL7 685 aa23.86■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms