RNA–Protein interactions for RNA: ENST00000397906.6

TTC28-201, Transcript of tetratricopeptide repeat domain 28, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TTC28, Length 11,795 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-201ENST00000397906 TRMT10AQ8TBZ6 339 aaKnown RBP10.89□□□□□ -0.67
TTC28-201ENST00000397906 ZNF689Q96CS4 500 aaPredicted RBP10.89□□□□□ -0.67
TTC28-201ENST00000397906 BOCQ9BWV1 1114 aa10.89□□□□□ -0.67
TTC28-201ENST00000397906 SP140LQ9H930 580 aa10.89□□□□□ -0.67
TTC28-201ENST00000397906 TRNAU1APQ9NX07 287 aaKnown RBP10.89□□□□□ -0.67
TTC28-201ENST00000397906 ACAD8Q9UKU7 415 aa10.89□□□□□ -0.67
TTC28-201ENST00000397906 SLC10A2Q12908 348 aaPredicted RBP10.89□□□□□ -0.67
TTC28-201ENST00000397906 GAS6Q14393 721 aa10.89□□□□□ -0.67
TTC28-201ENST00000397906 KIAA0319Q5VV43 1072 aa10.89□□□□□ -0.67
TTC28-201ENST00000397906 REEP3Q6NUK4 255 aa10.89□□□□□ -0.67
TTC28-201ENST00000397906 PHTF2Q8N3S3 785 aa10.89□□□□□ -0.67
TTC28-201ENST00000397906 TOR3AQ9H497 397 aa10.89□□□□□ -0.67
TTC28-201ENST00000397906 PCSK2P16519 638 aa10.88□□□□□ -0.67
TTC28-201ENST00000397906 SOX2P48431 317 aa10.88□□□□□ -0.67
TTC28-201ENST00000397906 TMED4Q7Z7H5 227 aa10.88□□□□□ -0.67
TTC28-201ENST00000397906 DENND6BQ8NEG7 585 aa10.88□□□□□ -0.67
TTC28-201ENST00000397906 CPNE2Q96FN4 548 aaPredicted RBP10.88□□□□□ -0.67
TTC28-201ENST00000397906 CITED4Q96RK1 184 aa10.88□□□□□ -0.67
TTC28-201ENST00000397906 C14orf166Q9Y224 244 aaKnown RBP10.88□□□□□ -0.67
TTC28-201ENST00000397906 PTRH2Q9Y3E5 179 aaKnown RBP10.88□□□□□ -0.67
TTC28-201ENST00000397906 C13orf42A0A1B0GVH6 325 aa10.88□□□□□ -0.67
TTC28-201ENST00000397906 H3BML4 177 aa10.88□□□□□ -0.67
TTC28-201ENST00000397906 H2BFMP0C1H6 154 aa10.88□□□□□ -0.67
TTC28-201ENST00000397906 DSC1Q08554 894 aa10.88□□□□□ -0.67
TTC28-201ENST00000397906 RAB6CQ53S08 254 aa10.88□□□□□ -0.67
TTC28-201ENST00000397906 MOAP1Q96BY2 351 aa10.88□□□□□ -0.67
TTC28-201ENST00000397906 TLCD1Q96CP7 247 aa10.88□□□□□ -0.67
TTC28-201ENST00000397906 SLC7A6OSQ96CW6 309 aaPredicted RBP10.88□□□□□ -0.67
TTC28-201ENST00000397906 RAB6CQ9H0N0 254 aa10.88□□□□□ -0.67
TTC28-201ENST00000397906 ZNF701Q9NV72 531 aaPredicted RBP10.88□□□□□ -0.67
TTC28-201ENST00000397906 EIF3KQ9UBQ5 218 aaKnown RBP10.88□□□□□ -0.67
TTC28-201ENST00000397906 A0A1W2PPK0 400 aa10.88□□□□□ -0.67
TTC28-201ENST00000397906 APOL3O95236 402 aa10.88□□□□□ -0.67
TTC28-201ENST00000397906 ADH7P40394 386 aa10.88□□□□□ -0.67
TTC28-201ENST00000397906 DLX2Q07687 328 aaPredicted RBP10.88□□□□□ -0.67
TTC28-201ENST00000397906 ABRAXAS2Q15018 415 aa10.88□□□□□ -0.67
TTC28-201ENST00000397906 NPTX1Q15818 432 aa10.88□□□□□ -0.67
TTC28-201ENST00000397906 ZFP69Q49AA0 526 aa10.88□□□□□ -0.67
TTC28-201ENST00000397906 ERMAPQ96PL5 475 aaPredicted RBP10.88□□□□□ -0.67
TTC28-201ENST00000397906 CDCA3Q99618 268 aaPredicted RBP10.88□□□□□ -0.67
TTC28-201ENST00000397906 HAPLN2Q9GZV7 340 aa10.88□□□□□ -0.67
TTC28-201ENST00000397906 TRPV4Q9HBA0 871 aa10.88□□□□□ -0.67
TTC28-201ENST00000397906 MARCH4Q9P2E8 410 aaPredicted RBP10.88□□□□□ -0.67
TTC28-201ENST00000397906 FETUBQ9UGM5 382 aa10.88□□□□□ -0.67
TTC28-201ENST00000397906 PROS1P07225 676 aa10.88□□□□□ -0.67
TTC28-201ENST00000397906 XRCC1P18887 633 aaPredicted RBP10.88□□□□□ -0.67
TTC28-201ENST00000397906 CDKN2DP55273 166 aa10.88□□□□□ -0.67
TTC28-201ENST00000397906 IGFN1Q86VF2 1251 aa10.88□□□□□ -0.67
TTC28-201ENST00000397906 LRRTM3Q86VH5 581 aa10.88□□□□□ -0.67
TTC28-201ENST00000397906 SHKBP1Q8TBC3 707 aa10.88□□□□□ -0.67
TTC28-201ENST00000397906 SLC2A13Q96QE2 648 aa10.88□□□□□ -0.67
TTC28-201ENST00000397906 HSD3B7Q9H2F3 369 aa10.88□□□□□ -0.67
TTC28-201ENST00000397906 KDM4BO94953 1096 aa10.88□□□□□ -0.67
TTC28-201ENST00000397906 MYOGP15173 224 aa10.88□□□□□ -0.67
TTC28-201ENST00000397906 PORP16435 677 aaPredicted RBP10.88□□□□□ -0.67
TTC28-201ENST00000397906 SIM1P81133 766 aaPredicted RBP10.88□□□□□ -0.67
TTC28-201ENST00000397906 GRIN2CQ14957 1233 aa10.88□□□□□ -0.67
TTC28-201ENST00000397906 SLC25A25Q6KCM7 469 aa10.88□□□□□ -0.67
TTC28-201ENST00000397906 NXPE4Q6UWF7 544 aa10.88□□□□□ -0.67
TTC28-201ENST00000397906 OR51A7Q8NH64 312 aa10.88□□□□□ -0.67
TTC28-201ENST00000397906 ASB9Q96DX5 294 aa10.88□□□□□ -0.67
TTC28-201ENST00000397906 MEMO1Q9Y316 297 aa10.88□□□□□ -0.67
TTC28-201ENST00000397906 VSTM2BA6NLU5 285 aa10.88□□□□□ -0.67
TTC28-201ENST00000397906 CKMT2P17540 419 aa10.88□□□□□ -0.67
TTC28-201ENST00000397906 GNG2P59768 71 aa10.88□□□□□ -0.67
TTC28-201ENST00000397906 FIGLAQ6QHK4 219 aa10.88□□□□□ -0.67
TTC28-201ENST00000397906 EID2Q8N6I1 236 aa10.88□□□□□ -0.67
TTC28-201ENST00000397906 MNTQ99583 582 aa10.88□□□□□ -0.67
TTC28-201ENST00000397906 SLC5A7Q9GZV3 580 aa10.88□□□□□ -0.67
TTC28-201ENST00000397906 ZBTB26Q9HCK0 441 aa10.88□□□□□ -0.67
TTC28-201ENST00000397906 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa10.88□□□□□ -0.67
TTC28-201ENST00000397906 C1orf226A1L170 272 aa10.88□□□□□ -0.67
TTC28-201ENST00000397906 YY2O15391 372 aa10.88□□□□□ -0.67
TTC28-201ENST00000397906 RAB36O95755 333 aa10.88□□□□□ -0.67
TTC28-201ENST00000397906 TMEM31Q5JXX7 168 aa10.88□□□□□ -0.67
TTC28-201ENST00000397906 TMEFF1Q8IYR6 380 aa10.88□□□□□ -0.67
TTC28-201ENST00000397906 OR5AR1Q8NGP9 310 aa10.88□□□□□ -0.67
TTC28-201ENST00000397906 DDX1Q92499 740 aaKnown RBP10.88□□□□□ -0.67
TTC28-201ENST00000397906 SRA1Q9HD15 236 aaKnown RBP10.88□□□□□ -0.67
TTC28-201ENST00000397906 ZNF623O75123 536 aa10.88□□□□□ -0.67
TTC28-201ENST00000397906 APBB3O95704 486 aa10.88□□□□□ -0.67
TTC28-201ENST00000397906 APOC1P02654 83 aa10.88□□□□□ -0.67
TTC28-201ENST00000397906 ZNF35P13682 527 aa10.88□□□□□ -0.67
TTC28-201ENST00000397906 HUS1BQ8NHY5 278 aa10.88□□□□□ -0.67
TTC28-201ENST00000397906 SPRYD4Q8WW59 207 aaPredicted RBP10.88□□□□□ -0.67
TTC28-201ENST00000397906 OSTF1Q92882 214 aa10.88□□□□□ -0.67
TTC28-201ENST00000397906 USB1Q9BQ65 265 aaKnown RBP10.88□□□□□ -0.67
TTC28-201ENST00000397906 KCNK12Q9HB15 430 aa10.88□□□□□ -0.67
TTC28-201ENST00000397906 STYXL1Q9Y6J8 313 aa10.88□□□□□ -0.67
TTC28-201ENST00000397906 METTL21EPA6NDL7 271 aa10.88□□□□□ -0.67
TTC28-201ENST00000397906 SLC22A2O15244 555 aa10.88□□□□□ -0.67
TTC28-201ENST00000397906 GSK3BP49841 420 aa10.88□□□□□ -0.67
TTC28-201ENST00000397906 LRIF1Q5T3J3 769 aa10.88□□□□□ -0.67
TTC28-201ENST00000397906 ZBTB8BQ8NAP8 495 aaPredicted RBP10.88□□□□□ -0.67
TTC28-201ENST00000397906 FIBINQ8TAL6 211 aa10.88□□□□□ -0.67
TTC28-201ENST00000397906 DMRTB1Q96MA1 342 aa10.88□□□□□ -0.67
TTC28-201ENST00000397906 C12orf4Q9NQ89 552 aa10.88□□□□□ -0.67
TTC28-201ENST00000397906 ZNF221Q9UK13 617 aa10.88□□□□□ -0.67
TTC28-201ENST00000397906 SPINT3P49223 89 aa10.87□□□□□ -0.67
TTC28-201ENST00000397906 KCNC4Q03721 635 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 68.1 ms