RNA–Protein interactions for RNA: ENST00000397761.6

PDLIM2-205, Transcript of PDZ and LIM domain 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PDLIM2, Length 1,491 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-205ENST00000397761 DNAJC14Q6Y2X3 702 aaPredicted RBP18.4■□□□□ 0.54
PDLIM2-205ENST00000397761 GPR155Q7Z3F1 870 aa18.4■□□□□ 0.54
PDLIM2-205ENST00000397761 CA13Q8N1Q1 262 aa18.4■□□□□ 0.54
PDLIM2-205ENST00000397761 OR1L3Q8NH93 324 aa18.4■□□□□ 0.54
PDLIM2-205ENST00000397761 PSMA8Q8TAA3 256 aa18.4■□□□□ 0.54
PDLIM2-205ENST00000397761 WDR60Q8WVS4 1066 aa18.4■□□□□ 0.54
PDLIM2-205ENST00000397761 ZNF501Q96CX3 271 aaPredicted RBP18.4■□□□□ 0.54
PDLIM2-205ENST00000397761 SH3GL1Q99961 368 aa18.4■□□□□ 0.54
PDLIM2-205ENST00000397761 IKZF5Q9H5V7 419 aa18.4■□□□□ 0.54
PDLIM2-205ENST00000397761 SLC35C2Q9NQQ7 365 aa18.4■□□□□ 0.54
PDLIM2-205ENST00000397761 C5AR2Q9P296 337 aa18.4■□□□□ 0.54
PDLIM2-205ENST00000397761 PACSIN3Q9UKS6 424 aa18.4■□□□□ 0.54
PDLIM2-205ENST00000397761 AP3M1Q9Y2T2 418 aa18.4■□□□□ 0.54
PDLIM2-205ENST00000397761 A0A1W2PRB8 838 aa18.39■□□□□ 0.54
PDLIM2-205ENST00000397761 A8MUI8 341 aa18.39■□□□□ 0.54
PDLIM2-205ENST00000397761 TMEM150CB9EJG8 249 aa18.39■□□□□ 0.54
PDLIM2-205ENST00000397761 CYR61O00622 381 aa18.39■□□□□ 0.54
PDLIM2-205ENST00000397761 DNAJA2O60884 412 aa18.39■□□□□ 0.54
PDLIM2-205ENST00000397761 CIB2O75838 187 aa18.39■□□□□ 0.54
PDLIM2-205ENST00000397761 HBA1P69905 142 aa18.39■□□□□ 0.54
PDLIM2-205ENST00000397761 SELPLGQ14242 412 aa18.39■□□□□ 0.54
PDLIM2-205ENST00000397761 FAM214AQ32MH5 1076 aa18.39■□□□□ 0.54
PDLIM2-205ENST00000397761 YOD1Q5VVQ6 348 aaPredicted RBP18.39■□□□□ 0.54
PDLIM2-205ENST00000397761 TLDC1Q6P9B6 456 aa18.39■□□□□ 0.54
PDLIM2-205ENST00000397761 NAXDQ8IW45 347 aa18.39■□□□□ 0.54
PDLIM2-205ENST00000397761 OR9A4Q8NGU2 314 aa18.39■□□□□ 0.54
PDLIM2-205ENST00000397761 N4BP2L2Q92802 583 aaPredicted RBP18.39■□□□□ 0.54
PDLIM2-205ENST00000397761 CCDC74BQ96LY2 380 aa18.39■□□□□ 0.54
PDLIM2-205ENST00000397761 TRIM8Q9BZR9 551 aa18.39■□□□□ 0.54
PDLIM2-205ENST00000397761 FGF21Q9NSA1 209 aa18.39■□□□□ 0.54
PDLIM2-205ENST00000397761 SIDT1Q9NXL6 827 aaKnown RBP18.39■□□□□ 0.54
PDLIM2-205ENST00000397761 TAS2R9Q9NYW1 312 aa18.39■□□□□ 0.54
PDLIM2-205ENST00000397761 NIPSNAP3AQ9UFN0 247 aaPredicted RBP18.39■□□□□ 0.54
PDLIM2-205ENST00000397761 UTS2RQ9UKP6 389 aa18.39■□□□□ 0.54
PDLIM2-205ENST00000397761 ZNF292O60281 2723 aa18.39■□□□□ 0.54
PDLIM2-205ENST00000397761 ZNF860A6NHJ4 632 aa18.39■□□□□ 0.53
PDLIM2-205ENST00000397761 MYO1GB0I1T2 1018 aa18.39■□□□□ 0.53
PDLIM2-205ENST00000397761 SGK494L7N484 410 aa18.39■□□□□ 0.53
PDLIM2-205ENST00000397761 MGRN1O60291 552 aa18.39■□□□□ 0.53
PDLIM2-205ENST00000397761 PRKRAO75569 313 aaKnown RBP18.39■□□□□ 0.53
PDLIM2-205ENST00000397761 C6orf47O95873 294 aa18.39■□□□□ 0.53
PDLIM2-205ENST00000397761 GSNP06396 782 aa18.39■□□□□ 0.53
PDLIM2-205ENST00000397761 EFNA1P20827 205 aaPredicted RBP18.39■□□□□ 0.53
PDLIM2-205ENST00000397761 TGM1P22735 817 aa18.39■□□□□ 0.53
PDLIM2-205ENST00000397761 CPN2P22792 545 aa18.39■□□□□ 0.53
PDLIM2-205ENST00000397761 ITGA1P56199 1179 aa18.39■□□□□ 0.53
PDLIM2-205ENST00000397761 MTPNP58546 118 aa18.39■□□□□ 0.53
PDLIM2-205ENST00000397761 ACTR3P61158 418 aa18.39■□□□□ 0.53
PDLIM2-205ENST00000397761 ZFP36L1Q07352 338 aaKnown RBP18.39■□□□□ 0.53
PDLIM2-205ENST00000397761 RIPK1Q13546 671 aa18.39■□□□□ 0.53
PDLIM2-205ENST00000397761 TRA2AQ13595 282 aaKnown RBP eCLIP18.39■□□□□ 0.53
PDLIM2-205ENST00000397761 TRIM25Q14258 630 aaKnown RBP18.39■□□□□ 0.53
PDLIM2-205ENST00000397761 OR52E8Q6IFG1 317 aa18.39■□□□□ 0.53
PDLIM2-205ENST00000397761 RNF148Q8N7C7 305 aa18.39■□□□□ 0.53
PDLIM2-205ENST00000397761 TTC29Q8NA56 475 aaPredicted RBP18.39■□□□□ 0.53
PDLIM2-205ENST00000397761 OR5T3Q8NGG3 340 aa18.39■□□□□ 0.53
PDLIM2-205ENST00000397761 OR5P2Q8WZ92 322 aa18.39■□□□□ 0.53
PDLIM2-205ENST00000397761 EXOSC8Q96B26 276 aaKnown RBP18.39■□□□□ 0.53
PDLIM2-205ENST00000397761 CCDC124Q96CT7 223 aaKnown RBP18.39■□□□□ 0.53
PDLIM2-205ENST00000397761 ASB9Q96DX5 294 aa18.39■□□□□ 0.53
PDLIM2-205ENST00000397761 MVB12AQ96EY5 273 aa18.39■□□□□ 0.53
PDLIM2-205ENST00000397761 ZBED6CLQ96FA7 236 aaPredicted RBP18.39■□□□□ 0.53
PDLIM2-205ENST00000397761 CSF3RQ99062 836 aa18.39■□□□□ 0.53
PDLIM2-205ENST00000397761 PARD6AQ9NPB6 346 aa18.39■□□□□ 0.53
PDLIM2-205ENST00000397761 ZNF282Q9UDV7 671 aaPredicted RBP18.39■□□□□ 0.53
PDLIM2-205ENST00000397761 VPS4AQ9UN37 437 aa18.39■□□□□ 0.53
PDLIM2-205ENST00000397761 L3MBTL1Q9Y468 752 aa18.39■□□□□ 0.53
PDLIM2-205ENST00000397761 SPACA6W5XKT8 324 aa18.39■□□□□ 0.53
PDLIM2-205ENST00000397761 A0A0A6YYC8 382 aaPredicted RBP18.38■□□□□ 0.53
PDLIM2-205ENST00000397761 GLOD5A6NK44 160 aa18.38■□□□□ 0.53
PDLIM2-205ENST00000397761 H0YIG0 161 aa18.38■□□□□ 0.53
PDLIM2-205ENST00000397761 I3L1I5 382 aaPredicted RBP18.38■□□□□ 0.53
PDLIM2-205ENST00000397761 ACOT8O14734 319 aa18.38■□□□□ 0.53
PDLIM2-205ENST00000397761 GFRA3O60609 400 aa18.38■□□□□ 0.53
PDLIM2-205ENST00000397761 RDH16O75452 317 aa18.38■□□□□ 0.53
PDLIM2-205ENST00000397761 ANP32DO95626 131 aa18.38■□□□□ 0.53
PDLIM2-205ENST00000397761 CPSF4O95639 269 aaKnown RBP18.38■□□□□ 0.53
PDLIM2-205ENST00000397761 GPX2P18283 190 aa18.38■□□□□ 0.53
PDLIM2-205ENST00000397761 TLX1P31314 330 aaPredicted RBP18.38■□□□□ 0.53
PDLIM2-205ENST00000397761 GSK3BP49841 420 aa18.38■□□□□ 0.53
PDLIM2-205ENST00000397761 RAB38P57729 211 aa18.38■□□□□ 0.53
PDLIM2-205ENST00000397761 OLR1P78380 273 aa18.38■□□□□ 0.53
PDLIM2-205ENST00000397761 MS4A2Q01362 244 aa18.38■□□□□ 0.53
PDLIM2-205ENST00000397761 ACY1Q03154 408 aa18.38■□□□□ 0.53
PDLIM2-205ENST00000397761 LIPEQ05469 1076 aa18.38■□□□□ 0.53
PDLIM2-205ENST00000397761 TRAP1Q12931 704 aaKnown RBP18.38■□□□□ 0.53
PDLIM2-205ENST00000397761 GAB1Q13480 694 aa18.38■□□□□ 0.53
PDLIM2-205ENST00000397761 CYB5D1Q6P9G0 228 aa18.38■□□□□ 0.53
PDLIM2-205ENST00000397761 PRR23CQ6ZRP0 262 aa18.38■□□□□ 0.53
PDLIM2-205ENST00000397761 ZNF621Q6ZSS3 439 aa18.38■□□□□ 0.53
PDLIM2-205ENST00000397761 PTRH1Q86Y79 214 aaKnown RBP18.38■□□□□ 0.53
PDLIM2-205ENST00000397761 OR4A15Q8NGL6 344 aa18.38■□□□□ 0.53
PDLIM2-205ENST00000397761 ZFP90Q8TF47 636 aa18.38■□□□□ 0.53
PDLIM2-205ENST00000397761 CNRIP1Q96F85 164 aaPredicted RBP18.38■□□□□ 0.53
PDLIM2-205ENST00000397761 ZNF681Q96N22 645 aa18.38■□□□□ 0.53
PDLIM2-205ENST00000397761 ALG2Q9H553 416 aa18.38■□□□□ 0.53
PDLIM2-205ENST00000397761 KAT8Q9H7Z6 458 aaKnown RBP18.38■□□□□ 0.53
PDLIM2-205ENST00000397761 CUTCQ9NTM9 273 aa18.38■□□□□ 0.53
PDLIM2-205ENST00000397761 SERTAD3Q9UJW9 196 aa18.38■□□□□ 0.53
PDLIM2-205ENST00000397761 PSME2Q9UL46 239 aa18.38■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 111.5 ms