RNA–Protein interactions for RNA: ENST00000397408.5

TSPAN4-206, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TSPAN4, Length 1,430 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-206ENST00000397408 TMEM233B4DJY2 109 aa19.85■□□□□ 0.77
TSPAN4-206ENST00000397408 PROM1O43490 865 aa19.85■□□□□ 0.77
TSPAN4-206ENST00000397408 LDB3O75112 727 aa19.85■□□□□ 0.77
TSPAN4-206ENST00000397408 AIFM1O95831 613 aa19.85■□□□□ 0.77
TSPAN4-206ENST00000397408 SERPINE1P05121 402 aa19.85■□□□□ 0.77
TSPAN4-206ENST00000397408 PPP2R1BP30154 601 aa19.85■□□□□ 0.77
TSPAN4-206ENST00000397408 TLX1P31314 330 aaPredicted RBP19.85■□□□□ 0.77
TSPAN4-206ENST00000397408 ID2Q02363 134 aa19.85■□□□□ 0.77
TSPAN4-206ENST00000397408 SH2D4BQ5SQS7 431 aa19.85■□□□□ 0.77
TSPAN4-206ENST00000397408 HHATQ5VTY9 493 aa19.85■□□□□ 0.77
TSPAN4-206ENST00000397408 KANK2Q63ZY3 851 aa19.85■□□□□ 0.77
TSPAN4-206ENST00000397408 PLAG1Q6DJT9 500 aa19.85■□□□□ 0.77
TSPAN4-206ENST00000397408 RIPOR1Q6ZS17 1223 aa19.85■□□□□ 0.77
TSPAN4-206ENST00000397408 ASB18Q6ZVZ8 466 aa19.85■□□□□ 0.77
TSPAN4-206ENST00000397408 AGR3Q8TD06 166 aa19.85■□□□□ 0.77
TSPAN4-206ENST00000397408 MGARPQ8TDB4 240 aa19.85■□□□□ 0.77
TSPAN4-206ENST00000397408 CHTF18Q8WVB6 975 aa19.85■□□□□ 0.77
TSPAN4-206ENST00000397408 APIPQ96GX9 242 aa19.85■□□□□ 0.77
TSPAN4-206ENST00000397408 ZNF552Q9H707 407 aaPredicted RBP19.85■□□□□ 0.77
TSPAN4-206ENST00000397408 RPF2Q9H7B2 306 aaKnown RBP19.85■□□□□ 0.77
TSPAN4-206ENST00000397408 VIPAS39Q9H9C1 493 aa19.85■□□□□ 0.77
TSPAN4-206ENST00000397408 WDR41Q9HAD4 459 aa19.85■□□□□ 0.77
TSPAN4-206ENST00000397408 PNO1Q9NRX1 252 aaKnown RBP19.85■□□□□ 0.77
TSPAN4-206ENST00000397408 TEX10Q9NXF1 929 aaPredicted RBP19.85■□□□□ 0.77
TSPAN4-206ENST00000397408 PTGDR2Q9Y5Y4 395 aa19.85■□□□□ 0.77
TSPAN4-206ENST00000397408 MYOCOSA0A1B0GUC4 107 aa19.85■□□□□ 0.77
TSPAN4-206ENST00000397408 FGF17O60258 216 aa19.85■□□□□ 0.77
TSPAN4-206ENST00000397408 ALPPP05187 535 aa19.85■□□□□ 0.77
TSPAN4-206ENST00000397408 NEFHP12036 1026 aa19.85■□□□□ 0.77
TSPAN4-206ENST00000397408 ICAM2P13598 275 aa19.85■□□□□ 0.77
TSPAN4-206ENST00000397408 BTKQ06187 659 aa19.85■□□□□ 0.77
TSPAN4-206ENST00000397408 ACSM2AQ08AH3 577 aa19.85■□□□□ 0.77
TSPAN4-206ENST00000397408 STX4Q12846 297 aa19.85■□□□□ 0.77
TSPAN4-206ENST00000397408 NFATC3Q12968 1075 aa19.85■□□□□ 0.77
TSPAN4-206ENST00000397408 EXT1Q16394 746 aa19.85■□□□□ 0.77
TSPAN4-206ENST00000397408 SPIN4Q56A73 249 aa19.85■□□□□ 0.77
TSPAN4-206ENST00000397408 SPDYAQ5MJ70 313 aa19.85■□□□□ 0.77
TSPAN4-206ENST00000397408 CES4AQ5XG92 561 aa19.85■□□□□ 0.77
TSPAN4-206ENST00000397408 ACSM2BQ68CK6 577 aa19.85■□□□□ 0.77
TSPAN4-206ENST00000397408 ATG14Q6ZNE5 492 aa19.85■□□□□ 0.77
TSPAN4-206ENST00000397408 TRIM46Q7Z4K8 759 aa19.85■□□□□ 0.77
TSPAN4-206ENST00000397408 BRIX1Q8TDN6 353 aaKnown RBP19.85■□□□□ 0.77
TSPAN4-206ENST00000397408 ANKRD9Q96BM1 317 aaPredicted RBP19.85■□□□□ 0.77
TSPAN4-206ENST00000397408 SMAD5Q99717 465 aaKnown RBP19.85■□□□□ 0.77
TSPAN4-206ENST00000397408 NKIRAS1Q9NYS0 192 aa19.85■□□□□ 0.77
TSPAN4-206ENST00000397408 ZNF451Q9Y4E5 1061 aa19.85■□□□□ 0.77
TSPAN4-206ENST00000397408 SAGE2PA6NJ88 616 aa19.84■□□□□ 0.77
TSPAN4-206ENST00000397408 GLOD5A6NK44 160 aa19.84■□□□□ 0.77
TSPAN4-206ENST00000397408 PCDH7O60245 1069 aa19.84■□□□□ 0.77
TSPAN4-206ENST00000397408 KLHL41O60662 606 aa19.84■□□□□ 0.77
TSPAN4-206ENST00000397408 HSPA4LO95757 839 aa19.84■□□□□ 0.77
TSPAN4-206ENST00000397408 CHEK2O96017 543 aa19.84■□□□□ 0.77
TSPAN4-206ENST00000397408 ITGAMP11215 1152 aa19.84■□□□□ 0.77
TSPAN4-206ENST00000397408 BGNP21810 368 aa19.84■□□□□ 0.77
TSPAN4-206ENST00000397408 WDR4P57081 412 aaKnown RBP19.84■□□□□ 0.77
TSPAN4-206ENST00000397408 SLC26A5P58743 744 aa19.84■□□□□ 0.77
TSPAN4-206ENST00000397408 AP2B1P63010 937 aa19.84■□□□□ 0.77
TSPAN4-206ENST00000397408 OR4N5Q8IXE1 308 aa19.84■□□□□ 0.77
TSPAN4-206ENST00000397408 GOLGA6L1Q8N7Z2 621 aa19.84■□□□□ 0.77
TSPAN4-206ENST00000397408 TANKQ92844 425 aa19.84■□□□□ 0.77
TSPAN4-206ENST00000397408 ATP6V1G3Q96LB4 118 aa19.84■□□□□ 0.77
TSPAN4-206ENST00000397408 ALOXE3Q9BYJ1 711 aa19.84■□□□□ 0.77
TSPAN4-206ENST00000397408 ADAP2Q9NPF8 381 aa19.84■□□□□ 0.77
TSPAN4-206ENST00000397408 MCM8Q9UJA3 840 aa19.84■□□□□ 0.77
TSPAN4-206ENST00000397408 TRAF6Q9Y4K3 522 aa19.84■□□□□ 0.77
TSPAN4-206ENST00000397408 PCDHGB7Q9Y5F8 929 aa19.84■□□□□ 0.77
TSPAN4-206ENST00000397408 DNAJC15Q9Y5T4 150 aa19.84■□□□□ 0.77
TSPAN4-206ENST00000397408 SYNDIG1LA6NDD5 238 aa19.83■□□□□ 0.76
TSPAN4-206ENST00000397408 TMEM114B3SHH9 223 aa19.83■□□□□ 0.76
TSPAN4-206ENST00000397408 LYPLA1O75608 230 aaPredicted RBP19.83■□□□□ 0.76
TSPAN4-206ENST00000397408 MYO1DO94832 1006 aa19.83■□□□□ 0.76
TSPAN4-206ENST00000397408 IFNA16P05015 189 aa19.83■□□□□ 0.76
TSPAN4-206ENST00000397408 UQCRHP07919 91 aa19.83■□□□□ 0.76
TSPAN4-206ENST00000397408 FGF4P08620 206 aa19.83■□□□□ 0.76
TSPAN4-206ENST00000397408 SLC18A1P54219 525 aa19.83■□□□□ 0.76
TSPAN4-206ENST00000397408 FOLH1Q04609 750 aa19.83■□□□□ 0.76
TSPAN4-206ENST00000397408 SERTAD2Q14140 314 aa19.83■□□□□ 0.76
TSPAN4-206ENST00000397408 TTMPQ5BVD1 217 aa19.83■□□□□ 0.76
TSPAN4-206ENST00000397408 NDUFAF5Q5TEU4 345 aa19.83■□□□□ 0.76
TSPAN4-206ENST00000397408 AGAP7PQ5VUJ5 663 aa19.83■□□□□ 0.76
TSPAN4-206ENST00000397408 OR52E8Q6IFG1 317 aa19.83■□□□□ 0.76
TSPAN4-206ENST00000397408 CLYBLQ8N0X4 340 aa19.83■□□□□ 0.76
TSPAN4-206ENST00000397408 SIRT6Q8N6T7 355 aa19.83■□□□□ 0.76
TSPAN4-206ENST00000397408 M1APQ8TC57 530 aa19.83■□□□□ 0.76
TSPAN4-206ENST00000397408 TWIST2Q8WVJ9 160 aa19.83■□□□□ 0.76
TSPAN4-206ENST00000397408 AGAP4Q96P64 663 aa19.83■□□□□ 0.76
TSPAN4-206ENST00000397408 SH3GL2Q99962 352 aa19.83■□□□□ 0.76
TSPAN4-206ENST00000397408 EBPLQ9BY08 206 aa19.83■□□□□ 0.76
TSPAN4-206ENST00000397408 TUBB1Q9H4B7 451 aa19.83■□□□□ 0.76
TSPAN4-206ENST00000397408 BSNQ9UPA5 3926 aa19.83■□□□□ 0.76
TSPAN4-206ENST00000397408 ITM2AO43736 263 aa19.82■□□□□ 0.76
TSPAN4-206ENST00000397408 GUCY1B2O75343 617 aa19.82■□□□□ 0.76
TSPAN4-206ENST00000397408 C1QL1O75973 258 aa19.82■□□□□ 0.76
TSPAN4-206ENST00000397408 RSL1D1O76021 490 aaKnown RBP19.82■□□□□ 0.76
TSPAN4-206ENST00000397408 TIA1P31483 386 aaKnown RBP eCLIP19.82■□□□□ 0.761e-7■□□□□ 8.4
TSPAN4-206ENST00000397408 ABCE1P61221 599 aaKnown RBP19.82■□□□□ 0.76
TSPAN4-206ENST00000397408 RAE1P78406 368 aaKnown RBP19.82■□□□□ 0.76
TSPAN4-206ENST00000397408 TERF2Q15554 542 aa19.82■□□□□ 0.76
TSPAN4-206ENST00000397408 JMJD6Q6NYC1 403 aaPredicted RBP19.82■□□□□ 0.76
TSPAN4-206ENST00000397408 PTRH1Q86Y79 214 aaKnown RBP19.82■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms