RNA–Protein interactions for RNA: ENST00000397397.6

TSPAN4-203, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN4, Length 1,423 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-203ENST00000397397 FOXL2P58012 376 aa22.22■■□□□ 1.15
TSPAN4-203ENST00000397397 STX1BP61266 288 aa22.22■■□□□ 1.15
TSPAN4-203ENST00000397397 DNASE1L3Q13609 305 aa22.22■■□□□ 1.15
TSPAN4-203ENST00000397397 TGIF1Q15583 401 aa22.22■■□□□ 1.15
TSPAN4-203ENST00000397397 MINDY4Q4G0A6 757 aa22.22■■□□□ 1.15
TSPAN4-203ENST00000397397 PDCD4Q53EL6 469 aaKnown RBP22.22■■□□□ 1.15
TSPAN4-203ENST00000397397 OR52E8Q6IFG1 317 aa22.22■■□□□ 1.15
TSPAN4-203ENST00000397397 PRTFDC1Q9NRG1 225 aa22.22■■□□□ 1.15
TSPAN4-203ENST00000397397 WDR70Q9NW82 654 aa22.22■■□□□ 1.15
TSPAN4-203ENST00000397397 ASPMQ8IZT6 3477 aa22.21■■□□□ 1.15
TSPAN4-203ENST00000397397 CLDN4O14493 209 aa22.21■■□□□ 1.15
TSPAN4-203ENST00000397397 PCSK2P16519 638 aa22.21■■□□□ 1.15
TSPAN4-203ENST00000397397 DDCP20711 480 aa22.21■■□□□ 1.15
TSPAN4-203ENST00000397397 HPCAL1P37235 193 aa22.21■■□□□ 1.15
TSPAN4-203ENST00000397397 PCBP4P57723 403 aaKnown RBP22.21■■□□□ 1.15
TSPAN4-203ENST00000397397 RPS15P62841 145 aaKnown RBP22.21■■□□□ 1.15
TSPAN4-203ENST00000397397 GKAP1Q5VSY0 366 aaPredicted RBP22.21■■□□□ 1.15
TSPAN4-203ENST00000397397 MED25Q71SY5 747 aa22.21■■□□□ 1.15
TSPAN4-203ENST00000397397 LAPTM4BQ86VI4 370 aa22.21■■□□□ 1.15
TSPAN4-203ENST00000397397 MIER2Q8N344 545 aa22.21■■□□□ 1.15
TSPAN4-203ENST00000397397 KRTCAP2Q8N6L1 136 aa22.21■■□□□ 1.15
TSPAN4-203ENST00000397397 TANKQ92844 425 aa22.21■■□□□ 1.15
TSPAN4-203ENST00000397397 FGF11Q92914 225 aa22.21■■□□□ 1.15
TSPAN4-203ENST00000397397 SLC45A3Q96JT2 553 aa22.21■■□□□ 1.15
TSPAN4-203ENST00000397397 SPSB2Q99619 263 aa22.21■■□□□ 1.15
TSPAN4-203ENST00000397397 REEP4Q9H6H4 257 aa22.21■■□□□ 1.15
TSPAN4-203ENST00000397397 MIEF1Q9NQG6 463 aa22.21■■□□□ 1.15
TSPAN4-203ENST00000397397 MKL2Q9ULH7 1088 aa22.21■■□□□ 1.15
TSPAN4-203ENST00000397397 EXO1Q9UQ84 846 aaKnown RBP22.21■■□□□ 1.15
TSPAN4-203ENST00000397397 FARSAQ9Y285 508 aaKnown RBP22.21■■□□□ 1.15
TSPAN4-203ENST00000397397 PADI2Q9Y2J8 665 aa22.21■■□□□ 1.15
TSPAN4-203ENST00000397397 PTRH2Q9Y3E5 179 aaKnown RBP22.21■■□□□ 1.15
TSPAN4-203ENST00000397397 COPG1Q9Y678 874 aaKnown RBP22.21■■□□□ 1.15
TSPAN4-203ENST00000397397 TPRP12270 2363 aaKnown RBP22.2■■□□□ 1.14
TSPAN4-203ENST00000397397 CHD8Q9HCK8 2581 aa22.2■■□□□ 1.14
TSPAN4-203ENST00000397397 OR2W5A6NFC9 320 aa22.2■■□□□ 1.14
TSPAN4-203ENST00000397397 WASHC1A8K0Z3 465 aa22.2■■□□□ 1.14
TSPAN4-203ENST00000397397 C21orf140B9A014 251 aa22.2■■□□□ 1.14
TSPAN4-203ENST00000397397 HEXBP07686 556 aa22.2■■□□□ 1.14
TSPAN4-203ENST00000397397 PRPS1L1P21108 318 aa22.2■■□□□ 1.14
TSPAN4-203ENST00000397397 UFM1P61960 85 aa22.2■■□□□ 1.14
TSPAN4-203ENST00000397397 BTG2P78543 158 aa22.2■■□□□ 1.14
TSPAN4-203ENST00000397397 ACTN3Q08043 901 aaPredicted RBP22.2■■□□□ 1.14
TSPAN4-203ENST00000397397 SLC13A2Q13183 592 aa22.2■■□□□ 1.14
TSPAN4-203ENST00000397397 SQLEQ14534 574 aa22.2■■□□□ 1.14
TSPAN4-203ENST00000397397 ST3GAL2Q16842 350 aa22.2■■□□□ 1.14
TSPAN4-203ENST00000397397 BCAS4Q8TDM0 211 aa22.2■■□□□ 1.14
TSPAN4-203ENST00000397397 ACTL8Q9H568 366 aa22.2■■□□□ 1.14
TSPAN4-203ENST00000397397 SDR39U1Q9NRG7 319 aaPredicted RBP22.2■■□□□ 1.14
TSPAN4-203ENST00000397397 C5AR2Q9P296 337 aa22.2■■□□□ 1.14
TSPAN4-203ENST00000397397 ARL2BPQ9Y2Y0 163 aa22.2■■□□□ 1.14
TSPAN4-203ENST00000397397 MMACHCQ9Y4U1 282 aa22.2■■□□□ 1.14
TSPAN4-203ENST00000397397 ACACBO00763 2458 aa22.2■■□□□ 1.14
TSPAN4-203ENST00000397397 NDUFAB1O14561 156 aa22.19■■□□□ 1.14
TSPAN4-203ENST00000397397 ANKRD28O15084 1053 aa22.19■■□□□ 1.14
TSPAN4-203ENST00000397397 PRMT3O60678 531 aa22.19■■□□□ 1.14
TSPAN4-203ENST00000397397 CTNSO60931 367 aa22.19■■□□□ 1.14
TSPAN4-203ENST00000397397 FURINP09958 794 aa22.19■■□□□ 1.14
TSPAN4-203ENST00000397397 ATP4BP51164 291 aa22.19■■□□□ 1.14
TSPAN4-203ENST00000397397 HSD17B7P56937 341 aa22.19■■□□□ 1.14
TSPAN4-203ENST00000397397 IRX1P78414 480 aaPredicted RBP22.19■■□□□ 1.14
TSPAN4-203ENST00000397397 SLC48A1Q6P1K1 146 aa22.19■■□□□ 1.14
TSPAN4-203ENST00000397397 R3HCC1LQ7Z5L2 792 aaKnown RBP22.19■■□□□ 1.14
TSPAN4-203ENST00000397397 TICAM1Q8IUC6 712 aa22.19■■□□□ 1.14
TSPAN4-203ENST00000397397 TMEM151BQ8IW70 566 aa22.19■■□□□ 1.14
TSPAN4-203ENST00000397397 DNAJB14Q8TBM8 379 aa22.19■■□□□ 1.14
TSPAN4-203ENST00000397397 KIAA1143Q96AT1 154 aaPredicted RBP22.19■■□□□ 1.14
TSPAN4-203ENST00000397397 CRB3Q9BUF7 120 aa22.19■■□□□ 1.14
TSPAN4-203ENST00000397397 GPR87Q9BY21 358 aa22.19■■□□□ 1.14
TSPAN4-203ENST00000397397 VN1R1Q9GZP7 353 aa22.19■■□□□ 1.14
TSPAN4-203ENST00000397397 PRDM9Q9NQV7 894 aa22.19■■□□□ 1.14
TSPAN4-203ENST00000397397 ZIM2Q9NZV7 527 aa22.19■■□□□ 1.14
TSPAN4-203ENST00000397397 CES1P1Q9UKY3 287 aa22.19■■□□□ 1.14
TSPAN4-203ENST00000397397 PSME2Q9UL46 239 aa22.19■■□□□ 1.14
TSPAN4-203ENST00000397397 MAPRE3Q9UPY8 281 aa22.19■■□□□ 1.14
TSPAN4-203ENST00000397397 CEP295Q9C0D2 2601 aa22.18■■□□□ 1.14
TSPAN4-203ENST00000397397 TERTO14746 1132 aaKnown RBP22.18■■□□□ 1.14
TSPAN4-203ENST00000397397 SCAMP2O15127 329 aaKnown RBP22.18■■□□□ 1.14
TSPAN4-203ENST00000397397 LDB3O75112 727 aa22.18■■□□□ 1.14
TSPAN4-203ENST00000397397 SLC22A3O75751 556 aa22.18■■□□□ 1.14
TSPAN4-203ENST00000397397 KLF7O75840 302 aaPredicted RBP22.18■■□□□ 1.14
TSPAN4-203ENST00000397397 CAPNS1P04632 268 aa22.18■■□□□ 1.14
TSPAN4-203ENST00000397397 COX7A2P14406 83 aa22.18■■□□□ 1.14
TSPAN4-203ENST00000397397 F8A1P23610 371 aa22.18■■□□□ 1.14
TSPAN4-203ENST00000397397 PTPN4P29074 926 aa22.18■■□□□ 1.14
TSPAN4-203ENST00000397397 RPL3P39023 403 aaKnown RBP22.18■■□□□ 1.14
TSPAN4-203ENST00000397397 FOLR3P41439 243 aa22.18■■□□□ 1.14
TSPAN4-203ENST00000397397 EMP2P54851 167 aa22.18■■□□□ 1.14
TSPAN4-203ENST00000397397 RPS18P62269 152 aaKnown RBP22.18■■□□□ 1.14
TSPAN4-203ENST00000397397 CBX1P83916 185 aa22.18■■□□□ 1.14
TSPAN4-203ENST00000397397 RHAGQ02094 409 aa22.18■■□□□ 1.14
TSPAN4-203ENST00000397397 FAM69BQ5VUD6 431 aa22.18■■□□□ 1.14
TSPAN4-203ENST00000397397 ANKRD26P1Q6NSI1 321 aa22.18■■□□□ 1.14
TSPAN4-203ENST00000397397 QSOX2Q6ZRP7 698 aa22.18■■□□□ 1.14
TSPAN4-203ENST00000397397 OR4N5Q8IXE1 308 aa22.18■■□□□ 1.14
TSPAN4-203ENST00000397397 RIMKLAQ8IXN7 391 aa22.18■■□□□ 1.14
TSPAN4-203ENST00000397397 KDF1Q8NAX2 398 aaPredicted RBP22.18■■□□□ 1.14
TSPAN4-203ENST00000397397 OR2Y1Q8NGV0 311 aa22.18■■□□□ 1.14
TSPAN4-203ENST00000397397 NUDT8Q8WV74 236 aa22.18■■□□□ 1.14
TSPAN4-203ENST00000397397 EXOSC8Q96B26 276 aaKnown RBP22.18■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms