RNA–Protein interactions for RNA: ENST00000397276.6

PABPN1-202, Transcript of poly(A) binding protein nuclear 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PABPN1, Length 2,768 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-202ENST00000397276 PSD4Q8NDX1 1056 aa22.63■■□□□ 1.21
PABPN1-202ENST00000397276 APH1BQ8WW43 257 aa22.63■■□□□ 1.21
PABPN1-202ENST00000397276 LGALS12Q96DT0 336 aa22.63■■□□□ 1.21
PABPN1-202ENST00000397276 DSN1Q9H410 356 aa22.63■■□□□ 1.21
PABPN1-202ENST00000397276 DOCK9Q9BZ29 2069 aa22.63■■□□□ 1.21
PABPN1-202ENST00000397276 ADAMDEC1O15204 470 aa22.63■■□□□ 1.21
PABPN1-202ENST00000397276 RGS10O43665 173 aa22.63■■□□□ 1.21
PABPN1-202ENST00000397276 SH3BP5O60239 455 aa22.63■■□□□ 1.21
PABPN1-202ENST00000397276 ACP5P13686 325 aa22.63■■□□□ 1.21
PABPN1-202ENST00000397276 MANFP55145 182 aaKnown RBP22.63■■□□□ 1.21
PABPN1-202ENST00000397276 DNASE1L2Q92874 299 aa22.63■■□□□ 1.21
PABPN1-202ENST00000397276 DACH2Q96NX9 599 aa22.63■■□□□ 1.21
PABPN1-202ENST00000397276 HDAC8Q9BY41 377 aa22.63■■□□□ 1.21
PABPN1-202ENST00000397276 NECTIN3Q9NQS3 549 aa22.63■■□□□ 1.21
PABPN1-202ENST00000397276 MOSPD1Q9UJG1 213 aa22.63■■□□□ 1.21
PABPN1-202ENST00000397276 RNF6Q9Y252 685 aa22.63■■□□□ 1.21
PABPN1-202ENST00000397276 SNX11Q9Y5W9 270 aa22.63■■□□□ 1.21
PABPN1-202ENST00000397276 HSPE1-MOB4S4R3N1 261 aa22.63■■□□□ 1.21
PABPN1-202ENST00000397276 TRPM6Q9BX84 2022 aa22.63■■□□□ 1.21
PABPN1-202ENST00000397276 ATG2BQ96BY7 2078 aa22.63■■□□□ 1.21
PABPN1-202ENST00000397276 EYSQ5T1H1 3165 aa22.62■■□□□ 1.21
PABPN1-202ENST00000397276 M0R129 80 aa22.62■■□□□ 1.21
PABPN1-202ENST00000397276 PPM1DO15297 605 aa22.62■■□□□ 1.21
PABPN1-202ENST00000397276 RUNX3Q13761 415 aa22.62■■□□□ 1.21
PABPN1-202ENST00000397276 METRNLQ641Q3 311 aa22.62■■□□□ 1.21
PABPN1-202ENST00000397276 CEACAM20Q6UY09 585 aa22.62■■□□□ 1.21
PABPN1-202ENST00000397276 ADAMTSL4Q6UY14 1074 aa22.62■■□□□ 1.21
PABPN1-202ENST00000397276 ARMC8Q8IUR7 673 aa22.62■■□□□ 1.21
PABPN1-202ENST00000397276 P3H2Q8IVL5 708 aa22.62■■□□□ 1.21
PABPN1-202ENST00000397276 EXOSC8Q96B26 276 aaKnown RBP22.62■■□□□ 1.21
PABPN1-202ENST00000397276 AIF1LQ9BQI0 150 aa22.62■■□□□ 1.21
PABPN1-202ENST00000397276 NLNQ9BYT8 704 aa22.62■■□□□ 1.21
PABPN1-202ENST00000397276 PLA2G2FQ9BZM2 168 aa22.62■■□□□ 1.21
PABPN1-202ENST00000397276 THAP10Q9P2Z0 257 aaPredicted RBP22.62■■□□□ 1.21
PABPN1-202ENST00000397276 A0A1W2PP55 124 aa22.62■■□□□ 1.21
PABPN1-202ENST00000397276 PCDH17O14917 1159 aa22.62■■□□□ 1.21
PABPN1-202ENST00000397276 TBX1O43435 398 aa22.62■■□□□ 1.21
PABPN1-202ENST00000397276 OR1F1O43749 312 aa22.62■■□□□ 1.21
PABPN1-202ENST00000397276 FADDQ13158 208 aa22.62■■□□□ 1.21
PABPN1-202ENST00000397276 DUSP7Q16829 419 aa22.62■■□□□ 1.21
PABPN1-202ENST00000397276 SYT16Q17RD7 645 aa22.62■■□□□ 1.21
PABPN1-202ENST00000397276 COLEC12Q5KU26 742 aa22.62■■□□□ 1.21
PABPN1-202ENST00000397276 LGI4Q8N135 537 aa22.62■■□□□ 1.21
PABPN1-202ENST00000397276 MINDY2Q8NBR6 621 aa22.62■■□□□ 1.21
PABPN1-202ENST00000397276 UTP15Q8TED0 518 aaKnown RBP22.62■■□□□ 1.21
PABPN1-202ENST00000397276 RAB8BQ92930 207 aa22.62■■□□□ 1.21
PABPN1-202ENST00000397276 FERD3LQ96RJ6 166 aa22.62■■□□□ 1.21
PABPN1-202ENST00000397276 CTRCQ99895 268 aa22.62■■□□□ 1.21
PABPN1-202ENST00000397276 ZNF717Q9BY31 904 aaPredicted RBP22.62■■□□□ 1.21
PABPN1-202ENST00000397276 AHSPQ9NZD4 102 aa22.62■■□□□ 1.21
PABPN1-202ENST00000397276 KCNK2O95069 426 aa22.61■■□□□ 1.21
PABPN1-202ENST00000397276 SLC35G4P0C7Q5 338 aa22.61■■□□□ 1.21
PABPN1-202ENST00000397276 EEF1A2Q05639 463 aaKnown RBP22.61■■□□□ 1.21
PABPN1-202ENST00000397276 TCEA2Q15560 299 aa22.61■■□□□ 1.21
PABPN1-202ENST00000397276 AMER3Q8N944 861 aa22.61■■□□□ 1.21
PABPN1-202ENST00000397276 FAM83FQ8NEG4 500 aaPredicted RBP22.61■■□□□ 1.21
PABPN1-202ENST00000397276 RHOXF1Q8NHV9 184 aa22.61■■□□□ 1.21
PABPN1-202ENST00000397276 GTPBP3Q969Y2 492 aaKnown RBP22.61■■□□□ 1.21
PABPN1-202ENST00000397276 TM4SF18Q96CE8 201 aa22.61■■□□□ 1.21
PABPN1-202ENST00000397276 MACROD1Q9BQ69 325 aa22.61■■□□□ 1.21
PABPN1-202ENST00000397276 TPK1Q9H3S4 243 aa22.61■■□□□ 1.21
PABPN1-202ENST00000397276 TMEM38AQ9H6F2 299 aa22.61■■□□□ 1.21
PABPN1-202ENST00000397276 PCDHGB1Q9Y5G3 927 aa22.61■■□□□ 1.21
PABPN1-202ENST00000397276 PLXND1Q9Y4D7 1925 aa22.61■■□□□ 1.21
PABPN1-202ENST00000397276 WASHC1A8K0Z3 465 aa22.61■■□□□ 1.21
PABPN1-202ENST00000397276 SERPINB1P30740 379 aa22.61■■□□□ 1.21
PABPN1-202ENST00000397276 NUDT6P53370 316 aa22.61■■□□□ 1.21
PABPN1-202ENST00000397276 IFITM2Q01629 132 aa22.61■■□□□ 1.21
PABPN1-202ENST00000397276 RBBP4Q09028 425 aa22.61■■□□□ 1.21
PABPN1-202ENST00000397276 PROX2Q3B8N5 592 aa22.61■■□□□ 1.21
PABPN1-202ENST00000397276 WASH2PQ6VEQ5 465 aa22.61■■□□□ 1.21
PABPN1-202ENST00000397276 SZRD1Q7Z422 152 aa22.61■■□□□ 1.21
PABPN1-202ENST00000397276 HDDC3Q8N4P3 179 aa22.61■■□□□ 1.21
PABPN1-202ENST00000397276 CAPSLQ8WWF8 208 aa22.61■■□□□ 1.21
PABPN1-202ENST00000397276 HRASLS5Q96KN8 279 aa22.61■■□□□ 1.21
PABPN1-202ENST00000397276 ZBTB20Q9HC78 741 aaPredicted RBP22.61■■□□□ 1.21
PABPN1-202ENST00000397276 IMP3Q9NV31 184 aaKnown RBP22.61■■□□□ 1.21
PABPN1-202ENST00000397276 KCNK6Q9Y257 313 aa22.61■■□□□ 1.21
PABPN1-202ENST00000397276 PLEKHM1Q9Y4G2 1056 aa22.61■■□□□ 1.21
PABPN1-202ENST00000397276 KIAA1549LQ6ZVL6 1849 aa22.61■■□□□ 1.21
PABPN1-202ENST00000397276 LCMT2O60294 686 aaKnown RBP22.61■■□□□ 1.21
PABPN1-202ENST00000397276 KRT75O95678 551 aa22.61■■□□□ 1.21
PABPN1-202ENST00000397276 FCARP24071 287 aa22.61■■□□□ 1.21
PABPN1-202ENST00000397276 DSTNP60981 165 aa22.61■■□□□ 1.21
PABPN1-202ENST00000397276 CXCR4P61073 352 aa22.61■■□□□ 1.21
PABPN1-202ENST00000397276 AGBL4Q5VU57 503 aa22.61■■□□□ 1.21
PABPN1-202ENST00000397276 LYSMD2Q8IV50 215 aa22.61■■□□□ 1.21
PABPN1-202ENST00000397276 LINC01555Q8NAE3 123 aa22.61■■□□□ 1.21
PABPN1-202ENST00000397276 C12orf66Q96MD2 445 aa22.61■■□□□ 1.21
PABPN1-202ENST00000397276 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP22.61■■□□□ 1.212e-8■□□□□ 10.9
PABPN1-202ENST00000397276 STON1Q9Y6Q2 735 aa22.61■■□□□ 1.21
PABPN1-202ENST00000397276 BCHEP06276 602 aa22.6■■□□□ 1.21
PABPN1-202ENST00000397276 DDCP20711 480 aa22.6■■□□□ 1.21
PABPN1-202ENST00000397276 GTF2E2P29084 291 aaKnown RBP22.6■■□□□ 1.21
PABPN1-202ENST00000397276 C21orf33P30042 268 aaPredicted RBP22.6■■□□□ 1.21
PABPN1-202ENST00000397276 BSGP35613 385 aa22.6■■□□□ 1.21
PABPN1-202ENST00000397276 EIF2DP41214 584 aaKnown RBP22.6■■□□□ 1.21
PABPN1-202ENST00000397276 SLC19A1P41440 591 aa22.6■■□□□ 1.21
PABPN1-202ENST00000397276 SERPINB10P48595 397 aa22.6■■□□□ 1.21
PABPN1-202ENST00000397276 RPA4Q13156 261 aa22.6■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms