RNA–Protein interactions for RNA: ENST00000394888.8

CPSF7-202, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

APPRIS P4 TSL 2 BASIC

Gene CPSF7, Length 3,650 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-202ENST00000394888 ZIC1Q15915 447 aa14.62□□□□□ -0.07
CPSF7-202ENST00000394888 PAGE2BQ5JRK9 111 aa14.62□□□□□ -0.07
CPSF7-202ENST00000394888 LINC00299Q6ZSB3 139 aa14.62□□□□□ -0.07
CPSF7-202ENST00000394888 OR2A1Q8NGT9 310 aa14.62□□□□□ -0.07
CPSF7-202ENST00000394888 SUN3Q8TAQ9 357 aa14.62□□□□□ -0.07
CPSF7-202ENST00000394888 SMARCD2Q92925 531 aa14.62□□□□□ -0.07
CPSF7-202ENST00000394888 ASF1AQ9Y294 204 aa14.62□□□□□ -0.07
CPSF7-202ENST00000394888 LSM2Q9Y333 95 aaKnown RBP14.62□□□□□ -0.07
CPSF7-202ENST00000394888 OR1A2Q9Y585 309 aa14.62□□□□□ -0.07
CPSF7-202ENST00000394888 PCDHGA3Q9Y5H0 932 aa14.62□□□□□ -0.07
CPSF7-202ENST00000394888 CLCA1A8K7I4 914 aa14.61□□□□□ -0.07
CPSF7-202ENST00000394888 ADAMDEC1O15204 470 aa14.61□□□□□ -0.07
CPSF7-202ENST00000394888 PI15O43692 258 aa14.61□□□□□ -0.07
CPSF7-202ENST00000394888 NARSO43776 548 aaKnown RBP14.61□□□□□ -0.07
CPSF7-202ENST00000394888 FAM20BO75063 409 aa14.61□□□□□ -0.07
CPSF7-202ENST00000394888 MAN2A2P49641 1150 aa14.61□□□□□ -0.07
CPSF7-202ENST00000394888 PHEXP78562 749 aa14.61□□□□□ -0.07
CPSF7-202ENST00000394888 EFNB1P98172 346 aa14.61□□□□□ -0.07
CPSF7-202ENST00000394888 GANABQ14697 944 aaKnown RBP14.61□□□□□ -0.07
CPSF7-202ENST00000394888 ARHGAP19Q14CB8 494 aa14.61□□□□□ -0.07
CPSF7-202ENST00000394888 PTGES3Q15185 160 aaKnown RBP14.61□□□□□ -0.07
CPSF7-202ENST00000394888 LEXMQ3ZCV2 418 aa14.61□□□□□ -0.07
CPSF7-202ENST00000394888 P2RY8Q86VZ1 359 aa14.61□□□□□ -0.07
CPSF7-202ENST00000394888 VPS37AQ8NEZ2 397 aa14.61□□□□□ -0.07
CPSF7-202ENST00000394888 PHOSPHO2Q8TCD6 241 aa14.61□□□□□ -0.07
CPSF7-202ENST00000394888 SPPL2AQ8TCT8 520 aa14.61□□□□□ -0.07
CPSF7-202ENST00000394888 TAPBPLQ9BX59 468 aa14.61□□□□□ -0.07
CPSF7-202ENST00000394888 ZCCHC2Q9C0B9 1178 aaKnown RBP14.61□□□□□ -0.07
CPSF7-202ENST00000394888 CHST2Q9Y4C5 530 aa14.61□□□□□ -0.07
CPSF7-202ENST00000394888 LATO43561 262 aa14.61□□□□□ -0.07
CPSF7-202ENST00000394888 TGM1P22735 817 aa14.61□□□□□ -0.07
CPSF7-202ENST00000394888 NUDT6P53370 316 aa14.61□□□□□ -0.07
CPSF7-202ENST00000394888 TPD52P55327 224 aaPredicted RBP14.61□□□□□ -0.07
CPSF7-202ENST00000394888 CYP4F2P78329 520 aa14.61□□□□□ -0.07
CPSF7-202ENST00000394888 SPIBQ01892 262 aa14.61□□□□□ -0.07
CPSF7-202ENST00000394888 FLYWCH1Q4VC44 716 aa14.61□□□□□ -0.07
CPSF7-202ENST00000394888 FAM20CQ8IXL6 584 aa14.61□□□□□ -0.07
CPSF7-202ENST00000394888 SHISA5Q8N114 240 aa14.61□□□□□ -0.07
CPSF7-202ENST00000394888 IPCEF1Q8WWN9 437 aaPredicted RBP14.61□□□□□ -0.07
CPSF7-202ENST00000394888 SMG7Q92540 1137 aaKnown RBP14.61□□□□□ -0.07
CPSF7-202ENST00000394888 DDX31Q9H8H2 851 aaKnown RBP14.61□□□□□ -0.07
CPSF7-202ENST00000394888 AMBNQ9NP70 447 aa14.61□□□□□ -0.07
CPSF7-202ENST00000394888 SLC6A20Q9NP91 592 aa14.61□□□□□ -0.07
CPSF7-202ENST00000394888 ATAD3AQ9NVI7 634 aa14.61□□□□□ -0.07
CPSF7-202ENST00000394888 DEC1Q9P2X7 70 aa14.61□□□□□ -0.07
CPSF7-202ENST00000394888 FUOMA2VDF0 154 aa14.61□□□□□ -0.07
CPSF7-202ENST00000394888 BOLA2-SMG1P6H3BVE0 249 aa14.61□□□□□ -0.07
CPSF7-202ENST00000394888 PCCBP05166 539 aa14.61□□□□□ -0.07
CPSF7-202ENST00000394888 KELP23276 732 aa14.61□□□□□ -0.07
CPSF7-202ENST00000394888 GJA4P35212 333 aa14.61□□□□□ -0.07
CPSF7-202ENST00000394888 CCR3P51677 355 aa14.61□□□□□ -0.07
CPSF7-202ENST00000394888 SLC46A3Q7Z3Q1 461 aa14.61□□□□□ -0.07
CPSF7-202ENST00000394888 RORBQ92753 470 aa14.61□□□□□ -0.07
CPSF7-202ENST00000394888 INSM2Q96T92 566 aaPredicted RBP14.61□□□□□ -0.07
CPSF7-202ENST00000394888 RSPH9Q9H1X1 276 aaPredicted RBP14.61□□□□□ -0.07
CPSF7-202ENST00000394888 NT5DC2Q9H857 520 aa14.61□□□□□ -0.07
CPSF7-202ENST00000394888 NMNAT1Q9HAN9 279 aaPredicted RBP14.61□□□□□ -0.07
CPSF7-202ENST00000394888 PNMA8BQ9ULN7 279 aaPredicted RBP14.61□□□□□ -0.07
CPSF7-202ENST00000394888 SNX5Q9Y5X3 404 aa14.61□□□□□ -0.07
CPSF7-202ENST00000394888 MID1O15344 667 aa14.6□□□□□ -0.07
CPSF7-202ENST00000394888 ST8SIA6P61647 398 aa14.6□□□□□ -0.07
CPSF7-202ENST00000394888 TMED1Q13445 227 aa14.6□□□□□ -0.07
CPSF7-202ENST00000394888 DGCR6Q14129 220 aa14.6□□□□□ -0.07
CPSF7-202ENST00000394888 NR1D2Q14995 579 aa14.6□□□□□ -0.07
CPSF7-202ENST00000394888 HIST2H2ACQ16777 129 aaPredicted RBP14.6□□□□□ -0.07
CPSF7-202ENST00000394888 SLCO6A1Q86UG4 719 aa14.6□□□□□ -0.07
CPSF7-202ENST00000394888 AMZ2Q86W34 360 aa14.6□□□□□ -0.07
CPSF7-202ENST00000394888 GEMIN6Q8WXD5 167 aaKnown RBP14.6□□□□□ -0.07
CPSF7-202ENST00000394888 LGALS12Q96DT0 336 aa14.6□□□□□ -0.07
CPSF7-202ENST00000394888 GPA33Q99795 319 aa14.6□□□□□ -0.07
CPSF7-202ENST00000394888 MROQ9BYG7 248 aa14.6□□□□□ -0.07
CPSF7-202ENST00000394888 WARS2Q9UGM6 360 aaKnown RBP14.6□□□□□ -0.07
CPSF7-202ENST00000394888 H7BY64 318 aa14.6□□□□□ -0.07
CPSF7-202ENST00000394888 GAS1P54826 345 aa14.6□□□□□ -0.07
CPSF7-202ENST00000394888 DSTNP60981 165 aa14.6□□□□□ -0.07
CPSF7-202ENST00000394888 MLC1Q15049 377 aa14.6□□□□□ -0.07
CPSF7-202ENST00000394888 IRF4Q15306 451 aa14.6□□□□□ -0.07
CPSF7-202ENST00000394888 LZICQ8WZA0 190 aa14.6□□□□□ -0.07
CPSF7-202ENST00000394888 TMEM19Q96HH6 336 aa14.6□□□□□ -0.07
CPSF7-202ENST00000394888 PRAP1Q96NZ9 151 aa14.6□□□□□ -0.07
CPSF7-202ENST00000394888 KIF17Q9P2E2 1029 aa14.6□□□□□ -0.07
CPSF7-202ENST00000394888 A4GNTQ9UNA3 340 aa14.6□□□□□ -0.07
CPSF7-202ENST00000394888 POFUT2Q9Y2G5 429 aa14.6□□□□□ -0.07
CPSF7-202ENST00000394888 TRBC2A0A5B9 178 aa14.6□□□□□ -0.07
CPSF7-202ENST00000394888 EPOPA6NHQ4 379 aa14.6□□□□□ -0.07
CPSF7-202ENST00000394888 STSP08842 583 aa14.6□□□□□ -0.07
CPSF7-202ENST00000394888 ZNF12P17014 697 aa14.6□□□□□ -0.07
CPSF7-202ENST00000394888 ARMC8Q8IUR7 673 aa14.6□□□□□ -0.07
CPSF7-202ENST00000394888 PLD3Q8IV08 490 aa14.6□□□□□ -0.07
CPSF7-202ENST00000394888 RAD51AP1Q96B01 352 aa14.6□□□□□ -0.07
CPSF7-202ENST00000394888 ZIC2O95409 532 aaPredicted RBP14.59□□□□□ -0.07
CPSF7-202ENST00000394888 POU2F1P14859 743 aa14.59□□□□□ -0.07
CPSF7-202ENST00000394888 GADD45AP24522 165 aa14.59□□□□□ -0.07
CPSF7-202ENST00000394888 ELAVL4P26378 380 aaKnown RBP14.59□□□□□ -0.07
CPSF7-202ENST00000394888 PTGER1P34995 402 aa14.59□□□□□ -0.07
CPSF7-202ENST00000394888 FBXO46Q6PJ61 603 aaPredicted RBP14.59□□□□□ -0.07
CPSF7-202ENST00000394888 CCDC81Q6ZN84 652 aa14.59□□□□□ -0.07
CPSF7-202ENST00000394888 B3GNT7Q8NFL0 401 aa14.59□□□□□ -0.07
CPSF7-202ENST00000394888 COX4I2Q96KJ9 171 aa14.59□□□□□ -0.07
CPSF7-202ENST00000394888 COPS4Q9BT78 406 aa14.59□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms