RNA–Protein interactions for RNA: ENST00000394597.6

RFFL-202, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RFFL, Length 4,227 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-202ENST00000394597 DNMT3AQ9Y6K1 912 aaPredicted RBP5.46□□□□□ -1.54
RFFL-202ENST00000394597 MYO10Q9HD67 2058 aa5.46□□□□□ -1.54
RFFL-202ENST00000394597 TRBV23OR9-2A0A075B6M9 112 aa5.46□□□□□ -1.54
RFFL-202ENST00000394597 A0A1W2PP55 124 aa5.46□□□□□ -1.54
RFFL-202ENST00000394597 SMIM30A4D0T7 59 aa5.46□□□□□ -1.54
RFFL-202ENST00000394597 AP3D1O14617 1153 aa5.46□□□□□ -1.54
RFFL-202ENST00000394597 MID1O15344 667 aa5.46□□□□□ -1.54
RFFL-202ENST00000394597 SLC16A5O15375 505 aa5.46□□□□□ -1.54
RFFL-202ENST00000394597 SCO2O43819 266 aa5.46□□□□□ -1.54
RFFL-202ENST00000394597 DFNA5O60443 496 aa5.46□□□□□ -1.54
RFFL-202ENST00000394597 CPNE6O95741 557 aa5.46□□□□□ -1.54
RFFL-202ENST00000394597 HPRP00739 348 aa5.46□□□□□ -1.54
RFFL-202ENST00000394597 VIPP01282 170 aa5.46□□□□□ -1.54
RFFL-202ENST00000394597 MMP2P08253 660 aa5.46□□□□□ -1.54
RFFL-202ENST00000394597 ADRB3P13945 408 aa5.46□□□□□ -1.54
RFFL-202ENST00000394597 KCNC1P48547 511 aa5.46□□□□□ -1.54
RFFL-202ENST00000394597 PGDP52209 483 aa5.46□□□□□ -1.54
RFFL-202ENST00000394597 GMFBP60983 142 aa5.46□□□□□ -1.54
RFFL-202ENST00000394597 RPS21P63220 83 aaKnown RBP5.46□□□□□ -1.54
RFFL-202ENST00000394597 GALK2Q01415 458 aa5.46□□□□□ -1.54
RFFL-202ENST00000394597 FOXM1Q08050 763 aa5.46□□□□□ -1.54
RFFL-202ENST00000394597 AQP6Q13520 282 aa5.46□□□□□ -1.54
RFFL-202ENST00000394597 USF2Q15853 346 aaPredicted RBP5.46□□□□□ -1.54
RFFL-202ENST00000394597 ZNF77Q15935 545 aa5.46□□□□□ -1.54
RFFL-202ENST00000394597 UNC50Q53HI1 259 aa5.46□□□□□ -1.54
RFFL-202ENST00000394597 NDUFAF5Q5TEU4 345 aa5.46□□□□□ -1.54
RFFL-202ENST00000394597 PAMR1Q6UXH9 720 aa5.46□□□□□ -1.54
RFFL-202ENST00000394597 Q6ZNB5 142 aa5.46□□□□□ -1.54
RFFL-202ENST00000394597 GOLGA7Q7Z5G4 137 aa5.46□□□□□ -1.54
RFFL-202ENST00000394597 NPAS3Q8IXF0 933 aa5.46□□□□□ -1.54
RFFL-202ENST00000394597 ZNF655Q8N720 491 aaPredicted RBP5.46□□□□□ -1.54
RFFL-202ENST00000394597 GPR26Q8NDV2 337 aa5.46□□□□□ -1.54
RFFL-202ENST00000394597 TMIEQ8NEW7 156 aa5.46□□□□□ -1.54
RFFL-202ENST00000394597 TSTD1Q8NFU3 115 aa5.46□□□□□ -1.54
RFFL-202ENST00000394597 ZNF675Q8TD23 568 aa5.46□□□□□ -1.54
RFFL-202ENST00000394597 C12orf66Q96MD2 445 aa5.46□□□□□ -1.54
RFFL-202ENST00000394597 TSSK3Q96PN8 268 aa5.46□□□□□ -1.54
RFFL-202ENST00000394597 BBS4Q96RK4 519 aa5.46□□□□□ -1.54
RFFL-202ENST00000394597 HBEGFQ99075 208 aa5.46□□□□□ -1.54
RFFL-202ENST00000394597 FAIM2Q9BWQ8 316 aa5.46□□□□□ -1.54
RFFL-202ENST00000394597 TMEM168Q9H0V1 697 aa5.46□□□□□ -1.54
RFFL-202ENST00000394597 FBXO8Q9NRD0 319 aa5.46□□□□□ -1.54
RFFL-202ENST00000394597 HPF1Q9NWY4 346 aa5.46□□□□□ -1.54
RFFL-202ENST00000394597 OBP2AQ9NY56 170 aa5.46□□□□□ -1.54
RFFL-202ENST00000394597 CD207Q9UJ71 328 aa5.46□□□□□ -1.54
RFFL-202ENST00000394597 TMPRSS11EQ9UL52 423 aa5.46□□□□□ -1.54
RFFL-202ENST00000394597 EMCNQ9ULC0 261 aa5.46□□□□□ -1.54
RFFL-202ENST00000394597 ACSL5Q9ULC5 683 aa5.46□□□□□ -1.54
RFFL-202ENST00000394597 SLC22A14Q9Y267 594 aa5.46□□□□□ -1.54
RFFL-202ENST00000394597 CMAHPQ9Y471 501 aa5.46□□□□□ -1.54
RFFL-202ENST00000394597 OARD1Q9Y530 152 aa5.46□□□□□ -1.54
RFFL-202ENST00000394597 HEBP2Q9Y5Z4 205 aa5.46□□□□□ -1.54
RFFL-202ENST00000394597 PRRC2BQ5JSZ5 2229 aaKnown RBP5.46□□□□□ -1.54
RFFL-202ENST00000394597 ZNF646O15015 1829 aaPredicted RBP5.45□□□□□ -1.54
RFFL-202ENST00000394597 A0A1W2PP18 115 aa5.45□□□□□ -1.54
RFFL-202ENST00000394597 A0A1W2PQ09 198 aa5.45□□□□□ -1.54
RFFL-202ENST00000394597 SYNDIG1LA6NDD5 238 aa5.45□□□□□ -1.54
RFFL-202ENST00000394597 LOC730098B7Z3J9 87 aa5.45□□□□□ -1.54
RFFL-202ENST00000394597 CTDSP2O14595 271 aa5.45□□□□□ -1.54
RFFL-202ENST00000394597 VEGFDO43915 354 aa5.45□□□□□ -1.54
RFFL-202ENST00000394597 CDRT1O95170 752 aa5.45□□□□□ -1.54
RFFL-202ENST00000394597 LRATO95237 230 aa5.45□□□□□ -1.54
RFFL-202ENST00000394597 PAHP00439 452 aa5.45□□□□□ -1.54
RFFL-202ENST00000394597 EBLN1P0CF75 366 aa5.45□□□□□ -1.54
RFFL-202ENST00000394597 C6P13671 934 aa5.45□□□□□ -1.54
RFFL-202ENST00000394597 ACP5P13686 325 aa5.45□□□□□ -1.54
RFFL-202ENST00000394597 HSD17B1P14061 328 aa5.45□□□□□ -1.54
RFFL-202ENST00000394597 GDF5P43026 501 aa5.45□□□□□ -1.54
RFFL-202ENST00000394597 ASMTP46597 345 aa5.45□□□□□ -1.54
RFFL-202ENST00000394597 GPR85P60893 370 aa5.45□□□□□ -1.54
RFFL-202ENST00000394597 CSTF1Q05048 431 aaKnown RBP5.45□□□□□ -1.54
RFFL-202ENST00000394597 CDK5R2Q13319 367 aa5.45□□□□□ -1.54
RFFL-202ENST00000394597 DSG2Q14126 1118 aa5.45□□□□□ -1.54
RFFL-202ENST00000394597 CST6Q15828 149 aa5.45□□□□□ -1.54
RFFL-202ENST00000394597 ANXA8L1Q5VT79 327 aa5.45□□□□□ -1.54
RFFL-202ENST00000394597 PGBD2Q6P3X8 592 aa5.45□□□□□ -1.54
RFFL-202ENST00000394597 MACC1Q6ZN28 852 aa5.45□□□□□ -1.54
RFFL-202ENST00000394597 SLC44A2Q8IWA5 706 aaPredicted RBP5.45□□□□□ -1.54
RFFL-202ENST00000394597 UBQLNLQ8IYU4 475 aa5.45□□□□□ -1.54
RFFL-202ENST00000394597 ZBTB44Q8NCP5 570 aa5.45□□□□□ -1.54
RFFL-202ENST00000394597 C7orf57Q8NEG2 295 aa5.45□□□□□ -1.54
RFFL-202ENST00000394597 OR4F6Q8NGB9 312 aa5.45□□□□□ -1.54
RFFL-202ENST00000394597 OR2A12Q8NGT7 310 aa5.45□□□□□ -1.54
RFFL-202ENST00000394597 OR8K5Q8NH50 307 aa5.45□□□□□ -1.54
RFFL-202ENST00000394597 TFGQ92734 400 aaPredicted RBP5.45□□□□□ -1.54
RFFL-202ENST00000394597 COL21A1Q96P44 957 aa5.45□□□□□ -1.54
RFFL-202ENST00000394597 BOCQ9BWV1 1114 aa5.45□□□□□ -1.54
RFFL-202ENST00000394597 POLR2J2Q9GZM3 115 aaKnown RBP5.45□□□□□ -1.54
RFFL-202ENST00000394597 MCUBQ9NWR8 336 aa5.45□□□□□ -1.54
RFFL-202ENST00000394597 CMTM6Q9NX76 183 aa5.45□□□□□ -1.54
RFFL-202ENST00000394597 MAP10Q9P2G4 905 aa5.45□□□□□ -1.54
RFFL-202ENST00000394597 AASSQ9UDR5 926 aa5.45□□□□□ -1.54
RFFL-202ENST00000394597 GLS2Q9UI32 602 aa5.45□□□□□ -1.54
RFFL-202ENST00000394597 TRAV6A0A075B6T7 132 aa5.45□□□□□ -1.54
RFFL-202ENST00000394597 URADA6NGE7 173 aa5.45□□□□□ -1.54
RFFL-202ENST00000394597 SLC30A4O14863 429 aa5.45□□□□□ -1.54
RFFL-202ENST00000394597 VNN2O95498 520 aa5.45□□□□□ -1.54
RFFL-202ENST00000394597 ECDO95905 644 aaPredicted RBP5.45□□□□□ -1.54
RFFL-202ENST00000394597 APOC1P02654 83 aa5.45□□□□□ -1.54
RFFL-202ENST00000394597 GSTM1P09488 218 aa5.45□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms