RNA–Protein interactions for RNA: ENST00000394440.7

CCT4-201, Transcript of chaperonin containing TCP1 subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCT4, Length 2,520 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCT4-201ENST00000394440 NOBOXO60393 691 aa14.16□□□□□ -0.14
CCT4-201ENST00000394440 CST1P01037 141 aa14.16□□□□□ -0.14
CCT4-201ENST00000394440 UBTFL6P0CB48 400 aaPredicted RBP14.16□□□□□ -0.14
CCT4-201ENST00000394440 ARAFP10398 606 aa14.16□□□□□ -0.14
CCT4-201ENST00000394440 CASP9P55211 416 aa14.16□□□□□ -0.14
CCT4-201ENST00000394440 TXNL4AP83876 142 aaKnown RBP14.16□□□□□ -0.14
CCT4-201ENST00000394440 DMWDQ09019 674 aa14.16□□□□□ -0.14
CCT4-201ENST00000394440 HSPB3Q12988 150 aa14.16□□□□□ -0.14
CCT4-201ENST00000394440 CEBPEQ15744 281 aa14.16□□□□□ -0.14
CCT4-201ENST00000394440 LARP7Q4G0J3 582 aaKnown RBP eCLIP14.16□□□□□ -0.14
CCT4-201ENST00000394440 C18orf63Q68DL7 685 aa14.16□□□□□ -0.14
CCT4-201ENST00000394440 TMEM214Q6NUQ4 689 aaKnown RBP14.16□□□□□ -0.14
CCT4-201ENST00000394440 SLC48A1Q6P1K1 146 aa14.16□□□□□ -0.14
CCT4-201ENST00000394440 ZNF438Q7Z4V0 828 aa14.16□□□□□ -0.14
CCT4-201ENST00000394440 OR4N4Q8N0Y3 316 aa14.16□□□□□ -0.14
CCT4-201ENST00000394440 ARL14Q8N4G2 192 aa14.16□□□□□ -0.14
CCT4-201ENST00000394440 AVL9Q8NBF6 648 aa14.16□□□□□ -0.14
CCT4-201ENST00000394440 LMX1AQ8TE12 382 aa14.16□□□□□ -0.14
CCT4-201ENST00000394440 KLHL6Q8WZ60 621 aa14.16□□□□□ -0.14
CCT4-201ENST00000394440 AMDHD1Q96NU7 426 aa14.16□□□□□ -0.14
CCT4-201ENST00000394440 MAPKAP1Q9BPZ7 522 aa14.16□□□□□ -0.14
CCT4-201ENST00000394440 DLGAP2Q9P1A6 1054 aa14.16□□□□□ -0.14
CCT4-201ENST00000394440 FBXW2Q9UKT8 454 aa14.16□□□□□ -0.14
CCT4-201ENST00000394440 MAP4K5Q9Y4K4 846 aa14.16□□□□□ -0.14
CCT4-201ENST00000394440 TNRC6BQ9UPQ9 1833 aaKnown RBP14.16□□□□□ -0.14
CCT4-201ENST00000394440 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa14.15□□□□□ -0.14
CCT4-201ENST00000394440 MYO1GB0I1T2 1018 aa14.15□□□□□ -0.14
CCT4-201ENST00000394440 PGRMC2O15173 223 aa14.15□□□□□ -0.14
CCT4-201ENST00000394440 ZNF682O95780 498 aa14.15□□□□□ -0.14
CCT4-201ENST00000394440 ZNF23P17027 643 aa14.15□□□□□ -0.14
CCT4-201ENST00000394440 BTN3A2P78410 334 aa14.15□□□□□ -0.14
CCT4-201ENST00000394440 TBPL2Q6SJ96 375 aa14.15□□□□□ -0.14
CCT4-201ENST00000394440 MAMSTRQ6ZN01 415 aa14.15□□□□□ -0.14
CCT4-201ENST00000394440 TMEFF1Q8IYR6 380 aa14.15□□□□□ -0.14
CCT4-201ENST00000394440 CAMKVQ8NCB2 501 aa14.15□□□□□ -0.14
CCT4-201ENST00000394440 SUN3Q8TAQ9 357 aa14.15□□□□□ -0.14
CCT4-201ENST00000394440 CNRIP1Q96F85 164 aaPredicted RBP14.15□□□□□ -0.14
CCT4-201ENST00000394440 DUSP15Q9H1R2 295 aaPredicted RBP14.15□□□□□ -0.14
CCT4-201ENST00000394440 IL1RAPQ9NPH3 570 aa14.15□□□□□ -0.14
CCT4-201ENST00000394440 H0YGG7 62 aa14.15□□□□□ -0.14
CCT4-201ENST00000394440 GTF2A1P52655 376 aaPredicted RBP14.15□□□□□ -0.14
CCT4-201ENST00000394440 ARF3P61204 181 aaPredicted RBP14.15□□□□□ -0.14
CCT4-201ENST00000394440 SCARB2Q14108 478 aa14.15□□□□□ -0.14
CCT4-201ENST00000394440 ZNF630Q2M218 657 aaPredicted RBP14.15□□□□□ -0.14
CCT4-201ENST00000394440 CCDC80Q76M96 950 aa14.15□□□□□ -0.14
CCT4-201ENST00000394440 CARM1Q86X55 608 aa14.15□□□□□ -0.14
CCT4-201ENST00000394440 TFAP2CQ92754 450 aa14.15□□□□□ -0.14
CCT4-201ENST00000394440 HSH2DQ96JZ2 352 aa14.15□□□□□ -0.14
CCT4-201ENST00000394440 ROGDIQ9GZN7 287 aa14.15□□□□□ -0.14
CCT4-201ENST00000394440 SNX8Q9Y5X2 465 aa14.15□□□□□ -0.14
CCT4-201ENST00000394440 LILRA5A6NI73 299 aa14.14□□□□□ -0.15
CCT4-201ENST00000394440 GLOD5A6NK44 160 aa14.14□□□□□ -0.15
CCT4-201ENST00000394440 TYRP1P17643 537 aa14.14□□□□□ -0.15
CCT4-201ENST00000394440 PCBP3P57721 371 aaKnown RBP14.14□□□□□ -0.15
CCT4-201ENST00000394440 HNRNPKP61978 463 aaKnown RBP eCLIP14.14□□□□□ -0.15
CCT4-201ENST00000394440 DUSP2Q05923 314 aa14.14□□□□□ -0.15
CCT4-201ENST00000394440 SUZ12Q15022 739 aaKnown RBP14.14□□□□□ -0.15
CCT4-201ENST00000394440 IQCCQ4KMZ1 466 aa14.14□□□□□ -0.15
CCT4-201ENST00000394440 VTCN1Q7Z7D3 282 aa14.14□□□□□ -0.15
CCT4-201ENST00000394440 ZDHHC21Q8IVQ6 265 aa14.14□□□□□ -0.15
CCT4-201ENST00000394440 SDR16C5Q8N3Y7 309 aa14.14□□□□□ -0.15
CCT4-201ENST00000394440 TBC1D20Q96BZ9 403 aa14.14□□□□□ -0.15
CCT4-201ENST00000394440 C10orf90Q96M02 699 aa14.14□□□□□ -0.15
CCT4-201ENST00000394440 ANKRD60Q9BZ19 345 aa14.14□□□□□ -0.15
CCT4-201ENST00000394440 KCMF1Q9P0J7 381 aa14.14□□□□□ -0.15
CCT4-201ENST00000394440 MUTYHQ9UIF7 546 aa14.14□□□□□ -0.15
CCT4-201ENST00000394440 PCDHGB5Q9Y5G0 923 aa14.14□□□□□ -0.15
CCT4-201ENST00000394440 USP34Q70CQ2 3546 aa14.14□□□□□ -0.15
CCT4-201ENST00000394440 PCDH15Q96QU1 1955 aa14.14□□□□□ -0.15
CCT4-201ENST00000394440 URADA6NGE7 173 aa14.14□□□□□ -0.15
CCT4-201ENST00000394440 LMO7DNF2Z398 122 aa14.14□□□□□ -0.15
CCT4-201ENST00000394440 AQP9O43315 295 aa14.14□□□□□ -0.15
CCT4-201ENST00000394440 DSTNP60981 165 aa14.14□□□□□ -0.15
CCT4-201ENST00000394440 CDK6Q00534 326 aa14.14□□□□□ -0.15
CCT4-201ENST00000394440 ELOAQ14241 798 aaKnown RBP14.14□□□□□ -0.15
CCT4-201ENST00000394440 GK3PQ14409 553 aa14.14□□□□□ -0.15
CCT4-201ENST00000394440 OGFOD3Q6PK18 319 aa14.14□□□□□ -0.15
CCT4-201ENST00000394440 NFKBIDQ8NI38 313 aa14.14□□□□□ -0.15
CCT4-201ENST00000394440 ZCCHC10Q8TBK6 192 aa14.14□□□□□ -0.15
CCT4-201ENST00000394440 SERINC2Q96SA4 455 aa14.14□□□□□ -0.15
CCT4-201ENST00000394440 SEMA6CQ9H3T2 930 aa14.14□□□□□ -0.15
CCT4-201ENST00000394440 CCDC88CQ9P219 2028 aa14.14□□□□□ -0.15
CCT4-201ENST00000394440 ZSCAN9O15535 394 aaPredicted RBP14.13□□□□□ -0.15
CCT4-201ENST00000394440 ST6GAL1P15907 406 aa14.13□□□□□ -0.15
CCT4-201ENST00000394440 NTSP30990 170 aa14.13□□□□□ -0.15
CCT4-201ENST00000394440 CSNK1EP49674 416 aaKnown RBP14.13□□□□□ -0.15
CCT4-201ENST00000394440 IST1P53990 364 aa14.13□□□□□ -0.15
CCT4-201ENST00000394440 ARSFP54793 590 aa14.13□□□□□ -0.15
CCT4-201ENST00000394440 VLDLRP98155 873 aa14.13□□□□□ -0.15
CCT4-201ENST00000394440 CYBRD1Q53TN4 286 aa14.13□□□□□ -0.15
CCT4-201ENST00000394440 MANEAQ5SRI9 462 aa14.13□□□□□ -0.15
CCT4-201ENST00000394440 TMEM64Q6YI46 380 aa14.13□□□□□ -0.15
CCT4-201ENST00000394440 PIWIL3Q7Z3Z3 882 aaKnown RBP14.13□□□□□ -0.15
CCT4-201ENST00000394440 C6orf120Q7Z4R8 191 aa14.13□□□□□ -0.15
CCT4-201ENST00000394440 HORMAD2Q8N7B1 307 aa14.13□□□□□ -0.15
CCT4-201ENST00000394440 ZFP28Q8NHY6 868 aa14.13□□□□□ -0.15
CCT4-201ENST00000394440 CNBD2Q96M20 576 aa14.13□□□□□ -0.15
CCT4-201ENST00000394440 ZNF681Q96N22 645 aa14.13□□□□□ -0.15
CCT4-201ENST00000394440 TRAPPC9Q96Q05 1148 aa14.13□□□□□ -0.15
CCT4-201ENST00000394440 SERHL2Q9H4I8 314 aa14.13□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms