RNA–Protein interactions for RNA: ENST00000392981.6

XRN1-202, Transcript of 5'-3' exoribonuclease 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene XRN1, Length 5,383 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-202ENST00000392981 VBP1P61758 197 aa3.36□□□□□ -1.87
XRN1-202ENST00000392981 CXADRP78310 365 aa3.36□□□□□ -1.87
XRN1-202ENST00000392981 CAP1Q01518 475 aa3.36□□□□□ -1.87
XRN1-202ENST00000392981 LRRC63Q05C16 580 aa3.36□□□□□ -1.87
XRN1-202ENST00000392981 GRIK2Q13002 908 aa3.36□□□□□ -1.87
XRN1-202ENST00000392981 DNASE1L3Q13609 305 aa3.36□□□□□ -1.87
XRN1-202ENST00000392981 TBR1Q16650 682 aa3.36□□□□□ -1.87
XRN1-202ENST00000392981 FGD3Q5JSP0 725 aa3.36□□□□□ -1.87
XRN1-202ENST00000392981 NKAIN2Q5VXU1 208 aa3.36□□□□□ -1.87
XRN1-202ENST00000392981 HIST2H2AA3Q6FI13 130 aa3.36□□□□□ -1.87
XRN1-202ENST00000392981 Q6ZUG5 572 aa3.36□□□□□ -1.87
XRN1-202ENST00000392981 SLC16A9Q7RTY1 509 aa3.36□□□□□ -1.87
XRN1-202ENST00000392981 HIST2H2ABQ8IUE6 130 aaPredicted RBP3.36□□□□□ -1.87
XRN1-202ENST00000392981 RBM45Q8IUH3 476 aaKnown RBP3.36□□□□□ -1.87
XRN1-202ENST00000392981 ELMOD1Q8N336 334 aa3.36□□□□□ -1.87
XRN1-202ENST00000392981 C1orf52Q8N6N3 182 aaKnown RBP3.36□□□□□ -1.87
XRN1-202ENST00000392981 WIPF2Q8TF74 440 aaPredicted RBP3.36□□□□□ -1.87
XRN1-202ENST00000392981 HIST1H2ACQ93077 130 aa3.36□□□□□ -1.87
XRN1-202ENST00000392981 EGLN2Q96KS0 407 aa3.36□□□□□ -1.87
XRN1-202ENST00000392981 PLEKHA4Q9H4M7 779 aa3.36□□□□□ -1.87
XRN1-202ENST00000392981 LMAN1LQ9HAT1 526 aa3.36□□□□□ -1.87
XRN1-202ENST00000392981 PNPLA3Q9NST1 481 aa3.36□□□□□ -1.87
XRN1-202ENST00000392981 SLC7A8Q9UHI5 535 aa3.36□□□□□ -1.87
XRN1-202ENST00000392981 PSORS1C1Q9UIG5 152 aa3.36□□□□□ -1.87
XRN1-202ENST00000392981 IKZF2Q9UKS7 526 aa3.36□□□□□ -1.87
XRN1-202ENST00000392981 ABT1Q9ULW3 272 aaKnown RBP3.36□□□□□ -1.87
XRN1-202ENST00000392981 PARD3Q8TEW0 1356 aa3.35□□□□□ -1.87
XRN1-202ENST00000392981 C5orf60A6NFR6 353 aa3.35□□□□□ -1.87
XRN1-202ENST00000392981 B4DGG1 531 aa3.35□□□□□ -1.87
XRN1-202ENST00000392981 ZNF217O75362 1048 aa3.35□□□□□ -1.87
XRN1-202ENST00000392981 CTSAP10619 480 aa3.35□□□□□ -1.87
XRN1-202ENST00000392981 CD1CP29017 333 aa3.35□□□□□ -1.87
XRN1-202ENST00000392981 PTPN4P29074 926 aa3.35□□□□□ -1.87
XRN1-202ENST00000392981 AXLP30530 894 aa3.35□□□□□ -1.87
XRN1-202ENST00000392981 MMP15P51511 669 aa3.35□□□□□ -1.87
XRN1-202ENST00000392981 CRYBB1P53674 252 aaPredicted RBP3.35□□□□□ -1.87
XRN1-202ENST00000392981 CDH6P55285 790 aa3.35□□□□□ -1.87
XRN1-202ENST00000392981 CACNG1Q06432 222 aa3.35□□□□□ -1.87
XRN1-202ENST00000392981 SELPLGQ14242 412 aa3.35□□□□□ -1.87
XRN1-202ENST00000392981 NSUN5P2Q63ZY6 315 aa3.35□□□□□ -1.87
XRN1-202ENST00000392981 SLC25A25Q6KCM7 469 aa3.35□□□□□ -1.87
XRN1-202ENST00000392981 FRA10AC1Q70Z53 315 aa3.35□□□□□ -1.87
XRN1-202ENST00000392981 BIVMQ86UB2 503 aa3.35□□□□□ -1.87
XRN1-202ENST00000392981 SLC44A3Q8N4M1 653 aa3.35□□□□□ -1.87
XRN1-202ENST00000392981 FAM83FQ8NEG4 500 aaPredicted RBP3.35□□□□□ -1.87
XRN1-202ENST00000392981 CEP19Q96LK0 163 aa3.35□□□□□ -1.87
XRN1-202ENST00000392981 TIMP4Q99727 224 aa3.35□□□□□ -1.87
XRN1-202ENST00000392981 NPFFR1Q9GZQ6 430 aa3.35□□□□□ -1.87
XRN1-202ENST00000392981 FAM234AQ9H0X4 552 aa3.35□□□□□ -1.87
XRN1-202ENST00000392981 DNTTIP1Q9H147 329 aa3.35□□□□□ -1.87
XRN1-202ENST00000392981 GOLPH3Q9H4A6 298 aa3.35□□□□□ -1.87
XRN1-202ENST00000392981 GABRQQ9UN88 632 aa3.35□□□□□ -1.87
XRN1-202ENST00000392981 FAF1Q9UNN5 650 aaPredicted RBP3.35□□□□□ -1.87
XRN1-202ENST00000392981 PTCH1Q13635 1447 aa3.35□□□□□ -1.87
XRN1-202ENST00000392981 A0A087X0K7 114 aa3.35□□□□□ -1.87
XRN1-202ENST00000392981 A0A1W2PN81 502 aa3.35□□□□□ -1.87
XRN1-202ENST00000392981 FAM74A7A6NL05 159 aa3.35□□□□□ -1.87
XRN1-202ENST00000392981 GOLGA8KD6RF30 607 aa3.35□□□□□ -1.87
XRN1-202ENST00000392981 MS4A18H0YCH9 400 aa3.35□□□□□ -1.87
XRN1-202ENST00000392981 HSPA12AO43301 675 aa3.35□□□□□ -1.87
XRN1-202ENST00000392981 ATP8B1O43520 1251 aa3.35□□□□□ -1.87
XRN1-202ENST00000392981 ZNF821O75541 412 aaPredicted RBP3.35□□□□□ -1.87
XRN1-202ENST00000392981 TNFAIP8O95379 198 aa3.35□□□□□ -1.87
XRN1-202ENST00000392981 HOXB5P09067 269 aa3.35□□□□□ -1.87
XRN1-202ENST00000392981 CYP11B1P15538 503 aa3.35□□□□□ -1.87
XRN1-202ENST00000392981 MSR1P21757 451 aa3.35□□□□□ -1.87
XRN1-202ENST00000392981 CHRNA7P36544 502 aa3.35□□□□□ -1.87
XRN1-202ENST00000392981 AVPR1AP37288 418 aa3.35□□□□□ -1.87
XRN1-202ENST00000392981 CDC34P49427 236 aaPredicted RBP3.35□□□□□ -1.87
XRN1-202ENST00000392981 RASGEF1BQ0VAM2 473 aa3.35□□□□□ -1.87
XRN1-202ENST00000392981 GRB14Q14449 540 aa3.35□□□□□ -1.87
XRN1-202ENST00000392981 HEPACAMQ14CZ8 416 aa3.35□□□□□ -1.87
XRN1-202ENST00000392981 STX1AQ16623 288 aa3.35□□□□□ -1.87
XRN1-202ENST00000392981 FAM74A3Q4VXF1 159 aa3.35□□□□□ -1.87
XRN1-202ENST00000392981 FCRLBQ6BAA4 426 aa3.35□□□□□ -1.87
XRN1-202ENST00000392981 FBXO42Q6P3S6 717 aa3.35□□□□□ -1.87
XRN1-202ENST00000392981 LYPD4Q6UWN0 246 aa3.35□□□□□ -1.87
XRN1-202ENST00000392981 RHOUQ7L0Q8 258 aa3.35□□□□□ -1.87
XRN1-202ENST00000392981 TRPM8Q7Z2W7 1104 aa3.35□□□□□ -1.87
XRN1-202ENST00000392981 KLHDC1Q8N7A1 406 aa3.35□□□□□ -1.87
XRN1-202ENST00000392981 NDNFQ8TB73 568 aa3.35□□□□□ -1.87
XRN1-202ENST00000392981 SLC35B4Q969S0 331 aa3.35□□□□□ -1.87
XRN1-202ENST00000392981 LCORQ96JN0 433 aaPredicted RBP3.35□□□□□ -1.87
XRN1-202ENST00000392981 POLDIP3Q9BY77 421 aaKnown RBP3.35□□□□□ -1.87
XRN1-202ENST00000392981 TM6SF2Q9BZW4 377 aa3.35□□□□□ -1.87
XRN1-202ENST00000392981 POLR3FQ9H1D9 316 aaPredicted RBP3.35□□□□□ -1.87
XRN1-202ENST00000392981 BICC1Q9H694 974 aaKnown RBP3.35□□□□□ -1.87
XRN1-202ENST00000392981 GALNT9Q9HCQ5 603 aa3.35□□□□□ -1.87
XRN1-202ENST00000392981 NUDT15Q9NV35 164 aa3.35□□□□□ -1.87
XRN1-202ENST00000392981 NXF1Q9UBU9 619 aaKnown RBP3.35□□□□□ -1.87
XRN1-202ENST00000392981 PAIP2BQ9ULR5 123 aaKnown RBP3.35□□□□□ -1.87
XRN1-202ENST00000392981 ADAMTS5Q9UNA0 930 aa3.35□□□□□ -1.87
XRN1-202ENST00000392981 ABCG2Q9UNQ0 655 aa3.35□□□□□ -1.87
XRN1-202ENST00000392981 ROCK2O75116 1388 aaKnown RBP3.35□□□□□ -1.87
XRN1-202ENST00000392981 hDV102S1A0JD36 115 aa3.35□□□□□ -1.87
XRN1-202ENST00000392981 OR6C65A6NJZ3 312 aa3.35□□□□□ -1.87
XRN1-202ENST00000392981 H0YIG0 161 aa3.35□□□□□ -1.87
XRN1-202ENST00000392981 KCNN4O15554 427 aa3.35□□□□□ -1.87
XRN1-202ENST00000392981 DUX1O43812 170 aa3.35□□□□□ -1.87
XRN1-202ENST00000392981 TOM1O60784 492 aa3.35□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms