RNA–Protein interactions for RNA: ENST00000392399.3

UBBP1-201, Transcript of ubiquitin B pseudogene 1, humanhuman

BASIC

Gene UBBP1, Length 473 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBBP1-201ENST00000392399 G3BP2Q9UN86 482 aaKnown RBP6.36□□□□□ -1.39
UBBP1-201ENST00000392399 TMED5Q9Y3A6 229 aa6.36□□□□□ -1.39
UBBP1-201ENST00000392399 CCL27Q9Y4X3 112 aa6.36□□□□□ -1.39
UBBP1-201ENST00000392399 ASB4Q9Y574 426 aa6.36□□□□□ -1.39
UBBP1-201ENST00000392399 PCDHGB7Q9Y5F8 929 aa6.36□□□□□ -1.39
UBBP1-201ENST00000392399 KCNMB2Q9Y691 235 aa6.36□□□□□ -1.39
UBBP1-201ENST00000392399 IGSF10Q6WRI0 2623 aa6.35□□□□□ -1.39
UBBP1-201ENST00000392399 IGKV3D-11A0A0A0MRZ8 115 aa6.35□□□□□ -1.39
UBBP1-201ENST00000392399 IGHV1-45A0A0A0MS14 117 aa6.35□□□□□ -1.39
UBBP1-201ENST00000392399 NSG1A0A0A6YYJ2 146 aa6.35□□□□□ -1.39
UBBP1-201ENST00000392399 C1orf226A1L170 272 aa6.35□□□□□ -1.39
UBBP1-201ENST00000392399 FAM227AF5H4B4 570 aa6.35□□□□□ -1.39
UBBP1-201ENST00000392399 CDK2AP1O14519 115 aa6.35□□□□□ -1.39
UBBP1-201ENST00000392399 ITM2AO43736 263 aa6.35□□□□□ -1.39
UBBP1-201ENST00000392399 TMPRSS11DO60235 418 aa6.35□□□□□ -1.39
UBBP1-201ENST00000392399 SNNO75324 88 aaPredicted RBP6.35□□□□□ -1.39
UBBP1-201ENST00000392399 SEC22BO75396 215 aa6.35□□□□□ -1.39
UBBP1-201ENST00000392399 EEDO75530 441 aaKnown RBP6.35□□□□□ -1.39
UBBP1-201ENST00000392399 CDC123O75794 336 aaPredicted RBP6.35□□□□□ -1.39
UBBP1-201ENST00000392399 DRD2P14416 443 aa6.35□□□□□ -1.39
UBBP1-201ENST00000392399 CHN1P15882 459 aa6.35□□□□□ -1.39
UBBP1-201ENST00000392399 NR1D1P20393 614 aa6.35□□□□□ -1.39
UBBP1-201ENST00000392399 TPP2P29144 1249 aaPredicted RBP6.35□□□□□ -1.39
UBBP1-201ENST00000392399 ARRB2P32121 409 aa6.35□□□□□ -1.39
UBBP1-201ENST00000392399 HK2P52789 917 aa6.35□□□□□ -1.39
UBBP1-201ENST00000392399 HNRNPH2P55795 449 aaKnown RBP6.35□□□□□ -1.39
UBBP1-201ENST00000392399 OR4D2P58180 307 aa6.35□□□□□ -1.39
UBBP1-201ENST00000392399 HMGCS1Q01581 520 aa6.35□□□□□ -1.39
UBBP1-201ENST00000392399 TNFRSF17Q02223 184 aa6.35□□□□□ -1.39
UBBP1-201ENST00000392399 STX4Q12846 297 aa6.35□□□□□ -1.39
UBBP1-201ENST00000392399 SLC13A2Q13183 592 aa6.35□□□□□ -1.39
UBBP1-201ENST00000392399 MAD2L1Q13257 205 aaPredicted RBP6.35□□□□□ -1.39
UBBP1-201ENST00000392399 ATP1A4Q13733 1029 aa6.35□□□□□ -1.39
UBBP1-201ENST00000392399 KIAA0040Q15053 153 aa6.35□□□□□ -1.39
UBBP1-201ENST00000392399 TERF2Q15554 542 aa6.35□□□□□ -1.39
UBBP1-201ENST00000392399 EXT1Q16394 746 aa6.35□□□□□ -1.39
UBBP1-201ENST00000392399 SMU1Q2TAY7 513 aa6.35□□□□□ -1.39
UBBP1-201ENST00000392399 ATP1A1-AS1Q5TC04 95 aa6.35□□□□□ -1.39
UBBP1-201ENST00000392399 FAM69BQ5VUD6 431 aa6.35□□□□□ -1.39
UBBP1-201ENST00000392399 JMJD6Q6NYC1 403 aaPredicted RBP6.35□□□□□ -1.39
UBBP1-201ENST00000392399 SCIMPQ6UWF3 145 aa6.35□□□□□ -1.39
UBBP1-201ENST00000392399 Q6ZSR9 355 aa6.35□□□□□ -1.39
UBBP1-201ENST00000392399 ANKRD37Q7Z713 158 aa6.35□□□□□ -1.39
UBBP1-201ENST00000392399 HPS6Q86YV9 775 aa6.35□□□□□ -1.39
UBBP1-201ENST00000392399 DDIASQ8IXT1 998 aa6.35□□□□□ -1.39
UBBP1-201ENST00000392399 LRRC34Q8IZ02 419 aa6.35□□□□□ -1.39
UBBP1-201ENST00000392399 SAMD14Q8IZD0 417 aaPredicted RBP6.35□□□□□ -1.39
UBBP1-201ENST00000392399 M1APQ8TC57 530 aa6.35□□□□□ -1.39
UBBP1-201ENST00000392399 LRRC8CQ8TDW0 803 aa6.35□□□□□ -1.39
UBBP1-201ENST00000392399 TWIST2Q8WVJ9 160 aa6.35□□□□□ -1.39
UBBP1-201ENST00000392399 DYDC1Q8WWB3 177 aa6.35□□□□□ -1.39
UBBP1-201ENST00000392399 TTC9Q92623 222 aa6.35□□□□□ -1.39
UBBP1-201ENST00000392399 ZNF75CPQ92670 426 aaPredicted RBP6.35□□□□□ -1.39
UBBP1-201ENST00000392399 TM4SF18Q96CE8 201 aa6.35□□□□□ -1.39
UBBP1-201ENST00000392399 APIPQ96GX9 242 aa6.35□□□□□ -1.39
UBBP1-201ENST00000392399 PPP3R2Q96LZ3 170 aa6.35□□□□□ -1.39
UBBP1-201ENST00000392399 HBEGFQ99075 208 aa6.35□□□□□ -1.39
UBBP1-201ENST00000392399 SORT1Q99523 831 aa6.35□□□□□ -1.39
UBBP1-201ENST00000392399 LPAR4Q99677 370 aa6.35□□□□□ -1.39
UBBP1-201ENST00000392399 ARHGAP9Q9BRR9 750 aa6.35□□□□□ -1.39
UBBP1-201ENST00000392399 PELOQ9BRX2 385 aaKnown RBP6.35□□□□□ -1.39
UBBP1-201ENST00000392399 SORBS1Q9BX66 1292 aaKnown RBP6.35□□□□□ -1.39
UBBP1-201ENST00000392399 LRTM1Q9HBL6 345 aa6.35□□□□□ -1.39
UBBP1-201ENST00000392399 MLXIPLQ9NP71 852 aa6.35□□□□□ -1.39
UBBP1-201ENST00000392399 INTS9Q9NV88 658 aaKnown RBP6.35□□□□□ -1.39
UBBP1-201ENST00000392399 VTI1BQ9UEU0 232 aa6.35□□□□□ -1.39
UBBP1-201ENST00000392399 FBXL4Q9UKA2 621 aa6.35□□□□□ -1.39
UBBP1-201ENST00000392399 ATG4BQ9Y4P1 393 aa6.35□□□□□ -1.39
UBBP1-201ENST00000392399 PCDHGA9Q9Y5G4 932 aaKnown RBP6.35□□□□□ -1.39
UBBP1-201ENST00000392399 PCDHA9Q9Y5H5 950 aa6.35□□□□□ -1.39
UBBP1-201ENST00000392399 ZFYVE26Q68DK2 2539 aa6.35□□□□□ -1.39
UBBP1-201ENST00000392399 CCDC88CQ9P219 2028 aa6.34□□□□□ -1.39
UBBP1-201ENST00000392399 GNG14A0A1W2PPG7 69 aa6.34□□□□□ -1.39
UBBP1-201ENST00000392399 A0A1W2PR48 441 aa6.34□□□□□ -1.39
UBBP1-201ENST00000392399 ARGFXA6NJG6 315 aa6.34□□□□□ -1.39
UBBP1-201ENST00000392399 TRPC5OSA6NMA1 111 aa6.34□□□□□ -1.39
UBBP1-201ENST00000392399 MKRN2OSH3BPM6 223 aa6.34□□□□□ -1.39
UBBP1-201ENST00000392399 PIP5K1BO14986 540 aa6.34□□□□□ -1.39
UBBP1-201ENST00000392399 LSM1O15116 133 aaKnown RBP6.34□□□□□ -1.39
UBBP1-201ENST00000392399 HDAC3O15379 428 aa6.34□□□□□ -1.39
UBBP1-201ENST00000392399 DYRK3O43781 588 aa6.34□□□□□ -1.39
UBBP1-201ENST00000392399 PCDH7O60245 1069 aa6.34□□□□□ -1.39
UBBP1-201ENST00000392399 SHOX2O60902 331 aaPredicted RBP6.34□□□□□ -1.39
UBBP1-201ENST00000392399 VPS4BO75351 444 aa6.34□□□□□ -1.39
UBBP1-201ENST00000392399 LYPLA1O75608 230 aaPredicted RBP6.34□□□□□ -1.39
UBBP1-201ENST00000392399 CEACAM4O75871 244 aa6.34□□□□□ -1.39
UBBP1-201ENST00000392399 GPR75O95800 540 aa6.34□□□□□ -1.39
UBBP1-201ENST00000392399 GBAP04062 536 aa6.34□□□□□ -1.39
UBBP1-201ENST00000392399 SERPINA7P05543 415 aa6.34□□□□□ -1.39
UBBP1-201ENST00000392399 ANXA4P09525 319 aaPredicted RBP6.34□□□□□ -1.39
UBBP1-201ENST00000392399 LINC00032P0C843 101 aa6.34□□□□□ -1.39
UBBP1-201ENST00000392399 NR2F6P10588 404 aa6.34□□□□□ -1.39
UBBP1-201ENST00000392399 COX6A1P12074 109 aa6.34□□□□□ -1.39
UBBP1-201ENST00000392399 COX7A2P14406 83 aa6.34□□□□□ -1.39
UBBP1-201ENST00000392399 DDX5P17844 614 aaKnown RBP6.34□□□□□ -1.39
UBBP1-201ENST00000392399 MAOAP21397 527 aa6.34□□□□□ -1.39
UBBP1-201ENST00000392399 MAPK1P28482 360 aa6.34□□□□□ -1.39
UBBP1-201ENST00000392399 TIA1P31483 386 aaKnown RBP eCLIP6.34□□□□□ -1.39
UBBP1-201ENST00000392399 GALNSP34059 522 aa6.34□□□□□ -1.39
UBBP1-201ENST00000392399 CCL11P51671 97 aa6.34□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms