RNA–Protein interactions for RNA: ENST00000390879.1

SNORA48.1-201, Transcript of small nucleolar RNA, H/ACA box 48, humanhuman

BASIC

Gene SNORA48, Length 135 nt, Biotype snoRNA, Subcellular localisation Exosome, Nucleolus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA48.1-201ENST00000390879 ST6GAL2Q96JF0 529 aa1.7□□□□□ -2.14
SNORA48.1-201ENST00000390879 LRR1Q96L50 414 aa1.7□□□□□ -2.14
SNORA48.1-201ENST00000390879 VPS35Q96QK1 796 aa1.7□□□□□ -2.14
SNORA48.1-201ENST00000390879 RAB40CQ96S21 281 aa1.7□□□□□ -2.14
SNORA48.1-201ENST00000390879 PCDHB18PQ96TA0 734 aa1.7□□□□□ -2.14
SNORA48.1-201ENST00000390879 S1PR3Q99500 378 aa1.7□□□□□ -2.14
SNORA48.1-201ENST00000390879 LRRC1Q9BTT6 524 aa1.7□□□□□ -2.14
SNORA48.1-201ENST00000390879 NLNQ9BYT8 704 aa1.7□□□□□ -2.14
SNORA48.1-201ENST00000390879 LRRCC1Q9C099 1032 aa1.7□□□□□ -2.14
SNORA48.1-201ENST00000390879 POLR1EQ9GZS1 481 aaKnown RBP1.7□□□□□ -2.14
SNORA48.1-201ENST00000390879 FAM49AQ9H0Q0 323 aaPredicted RBP1.7□□□□□ -2.14
SNORA48.1-201ENST00000390879 THAP2Q9H0W7 228 aa1.7□□□□□ -2.14
SNORA48.1-201ENST00000390879 CXXC4Q9H2H0 198 aa1.7□□□□□ -2.14
SNORA48.1-201ENST00000390879 CPVLQ9H3G5 476 aa1.7□□□□□ -2.14
SNORA48.1-201ENST00000390879 VPS37BQ9H9H4 285 aa1.7□□□□□ -2.14
SNORA48.1-201ENST00000390879 FKRPQ9H9S5 495 aa1.7□□□□□ -2.14
SNORA48.1-201ENST00000390879 CALHM2Q9HA72 323 aa1.7□□□□□ -2.14
SNORA48.1-201ENST00000390879 ZBTB20Q9HC78 741 aaPredicted RBP1.7□□□□□ -2.14
SNORA48.1-201ENST00000390879 S100A14Q9HCY8 104 aa1.7□□□□□ -2.14
SNORA48.1-201ENST00000390879 INTS9Q9NV88 658 aaKnown RBP1.7□□□□□ -2.14
SNORA48.1-201ENST00000390879 RBM28Q9NW13 759 aaKnown RBP1.7□□□□□ -2.14
SNORA48.1-201ENST00000390879 GDAP2Q9NXN4 497 aa1.7□□□□□ -2.14
SNORA48.1-201ENST00000390879 MIS18AQ9NYP9 233 aa1.7□□□□□ -2.14
SNORA48.1-201ENST00000390879 RAI14Q9P0K7 980 aa1.7□□□□□ -2.14
SNORA48.1-201ENST00000390879 BCAP29Q9UHQ4 241 aa1.7□□□□□ -2.14
SNORA48.1-201ENST00000390879 CTNNA3Q9UI47 895 aa1.7□□□□□ -2.14
SNORA48.1-201ENST00000390879 FBXL4Q9UKA2 621 aa1.7□□□□□ -2.14
SNORA48.1-201ENST00000390879 CLEC4AQ9UMR7 237 aa1.7□□□□□ -2.14
SNORA48.1-201ENST00000390879 FOXJ3Q9UPW0 622 aa1.7□□□□□ -2.14
SNORA48.1-201ENST00000390879 KLF2Q9Y5W3 355 aaPredicted RBP1.7□□□□□ -2.14
SNORA48.1-201ENST00000390879 SF3B1O75533 1304 aaKnown RBP eCLIP1.69□□□□□ -2.14
SNORA48.1-201ENST00000390879 ZMYM6O95789 1325 aa1.69□□□□□ -2.14
SNORA48.1-201ENST00000390879 ZNF521Q96K83 1311 aa1.69□□□□□ -2.14
SNORA48.1-201ENST00000390879 A0A087WUV0 522 aaPredicted RBP1.69□□□□□ -2.14
SNORA48.1-201ENST00000390879 A0A087WZ39 114 aa1.69□□□□□ -2.14
SNORA48.1-201ENST00000390879 C15orf38-AP3S2A0A0A6YYH1 394 aa1.69□□□□□ -2.14
SNORA48.1-201ENST00000390879 PLSCR5A0PG75 271 aa1.69□□□□□ -2.14
SNORA48.1-201ENST00000390879 SERINC4A6NH21 518 aa1.69□□□□□ -2.14
SNORA48.1-201ENST00000390879 ZSCAN5BA6NJL1 495 aa1.69□□□□□ -2.14
SNORA48.1-201ENST00000390879 CD8B2A6NJW9 211 aa1.69□□□□□ -2.14
SNORA48.1-201ENST00000390879 SHISA7A6NL88 538 aa1.69□□□□□ -2.14
SNORA48.1-201ENST00000390879 PRAC2D3DTV9 90 aa1.69□□□□□ -2.14
SNORA48.1-201ENST00000390879 PROB1E7EW31 1015 aa1.69□□□□□ -2.14
SNORA48.1-201ENST00000390879 ANHXE9PGG2 379 aa1.69□□□□□ -2.14
SNORA48.1-201ENST00000390879 C16orf97H3BN30 126 aa1.69□□□□□ -2.14
SNORA48.1-201ENST00000390879 CYR61O00622 381 aa1.69□□□□□ -2.14
SNORA48.1-201ENST00000390879 CXCL11O14625 94 aa1.69□□□□□ -2.14
SNORA48.1-201ENST00000390879 SH2D1BO14796 132 aa1.69□□□□□ -2.14
SNORA48.1-201ENST00000390879 SIGLEC5O15389 551 aa1.69□□□□□ -2.14
SNORA48.1-201ENST00000390879 P2RX6O15547 441 aa1.69□□□□□ -2.14
SNORA48.1-201ENST00000390879 NUDT21O43809 227 aaKnown RBP1.69□□□□□ -2.14
SNORA48.1-201ENST00000390879 GPRIN2O60269 458 aa1.69□□□□□ -2.14
SNORA48.1-201ENST00000390879 CIDEAO60543 219 aa1.69□□□□□ -2.14
SNORA48.1-201ENST00000390879 TBX19O60806 448 aa1.69□□□□□ -2.14
SNORA48.1-201ENST00000390879 ZNF821O75541 412 aaPredicted RBP1.69□□□□□ -2.14
SNORA48.1-201ENST00000390879 SURF6O75683 361 aaKnown RBP1.69□□□□□ -2.14
SNORA48.1-201ENST00000390879 CDK2AP2O75956 126 aa1.69□□□□□ -2.14
SNORA48.1-201ENST00000390879 ANXA9O76027 345 aa1.69□□□□□ -2.14
SNORA48.1-201ENST00000390879 DFFBO76075 338 aa1.69□□□□□ -2.14
SNORA48.1-201ENST00000390879 MFN2O95140 757 aa1.69□□□□□ -2.14
SNORA48.1-201ENST00000390879 TSHBP01222 138 aa1.69□□□□□ -2.14
SNORA48.1-201ENST00000390879 IL1BP01584 269 aa1.69□□□□□ -2.14
SNORA48.1-201ENST00000390879 VTNP04004 478 aa1.69□□□□□ -2.14
SNORA48.1-201ENST00000390879 CSF2P04141 144 aa1.69□□□□□ -2.14
SNORA48.1-201ENST00000390879 ANXA4P09525 319 aaPredicted RBP1.69□□□□□ -2.14
SNORA48.1-201ENST00000390879 FRMD6-AS1P0C7T7 363 aa1.69□□□□□ -2.14
SNORA48.1-201ENST00000390879 IGHV4-38-2P0DP08 117 aa1.69□□□□□ -2.14
SNORA48.1-201ENST00000390879 PRKAR1AP10644 381 aa1.69□□□□□ -2.14
SNORA48.1-201ENST00000390879 FGF5P12034 268 aa1.69□□□□□ -2.14
SNORA48.1-201ENST00000390879 KRT3P12035 628 aa1.69□□□□□ -2.14
SNORA48.1-201ENST00000390879 LIFP15018 202 aa1.69□□□□□ -2.14
SNORA48.1-201ENST00000390879 CALB2P22676 271 aa1.69□□□□□ -2.14
SNORA48.1-201ENST00000390879 PTGER3P43115 390 aa1.69□□□□□ -2.14
SNORA48.1-201ENST00000390879 NR4A2P43354 598 aa1.69□□□□□ -2.14
SNORA48.1-201ENST00000390879 SLC6A8P48029 635 aa1.69□□□□□ -2.14
SNORA48.1-201ENST00000390879 HOXA1P49639 335 aaPredicted RBP1.69□□□□□ -2.14
SNORA48.1-201ENST00000390879 RGS4P49798 205 aa1.69□□□□□ -2.14
SNORA48.1-201ENST00000390879 NAPAP54920 295 aa1.69□□□□□ -2.14
SNORA48.1-201ENST00000390879 RAG2P55895 527 aa1.69□□□□□ -2.14
SNORA48.1-201ENST00000390879 BACE1P56817 501 aa1.69□□□□□ -2.14
SNORA48.1-201ENST00000390879 RPS4XP62701 263 aaKnown RBP1.69□□□□□ -2.14
SNORA48.1-201ENST00000390879 BEX3Q00994 111 aa1.69□□□□□ -2.14
SNORA48.1-201ENST00000390879 TNFRSF17Q02223 184 aa1.69□□□□□ -2.14
SNORA48.1-201ENST00000390879 SRYQ05066 204 aa1.69□□□□□ -2.14
SNORA48.1-201ENST00000390879 GAGE5Q13069 117 aa1.69□□□□□ -2.14
SNORA48.1-201ENST00000390879 GAGE6Q13070 117 aa1.69□□□□□ -2.14
SNORA48.1-201ENST00000390879 CUL2Q13617 745 aa1.69□□□□□ -2.14
SNORA48.1-201ENST00000390879 DDX39BQ13838 428 aaKnown RBP1.69□□□□□ -2.14
SNORA48.1-201ENST00000390879 EXOSC2Q13868 293 aaKnown RBP1.69□□□□□ -2.14
SNORA48.1-201ENST00000390879 GRB14Q14449 540 aa1.69□□□□□ -2.14
SNORA48.1-201ENST00000390879 P2RY6Q15077 328 aa1.69□□□□□ -2.14
SNORA48.1-201ENST00000390879 P2RY14Q15391 338 aa1.69□□□□□ -2.14
SNORA48.1-201ENST00000390879 OR1C1Q15619 314 aa1.69□□□□□ -2.14
SNORA48.1-201ENST00000390879 CAMK4Q16566 473 aa1.69□□□□□ -2.14
SNORA48.1-201ENST00000390879 C3AR1Q16581 482 aa1.69□□□□□ -2.14
SNORA48.1-201ENST00000390879 ZNF74Q16587 644 aa1.69□□□□□ -2.14
SNORA48.1-201ENST00000390879 SHROOM1Q2M3G4 852 aaPredicted RBP1.69□□□□□ -2.14
SNORA48.1-201ENST00000390879 ANKRD55Q3KP44 614 aa1.69□□□□□ -2.14
SNORA48.1-201ENST00000390879 TCHHL1Q5QJ38 904 aaPredicted RBP1.69□□□□□ -2.14
SNORA48.1-201ENST00000390879 CWC27Q6UX04 472 aaKnown RBP1.69□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms