RNA–Protein interactions for RNA: ENST00000389386.7

VPS9D1-201, Transcript of VPS9 domain containing 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene VPS9D1, Length 2,748 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-201ENST00000389386 MEDAGQ5VYS4 303 aa14.01□□□□□ -0.17
VPS9D1-201ENST00000389386 METTL23Q86XA0 190 aa14.01□□□□□ -0.17
VPS9D1-201ENST00000389386 TTC16Q8NEE8 873 aa14.01□□□□□ -0.17
VPS9D1-201ENST00000389386 PROKR2Q8NFJ6 384 aa14.01□□□□□ -0.17
VPS9D1-201ENST00000389386 TMEM163Q8TC26 289 aa14.01□□□□□ -0.17
VPS9D1-201ENST00000389386 NELL1Q92832 810 aa14.01□□□□□ -0.17
VPS9D1-201ENST00000389386 USP7Q93009 1102 aa14.01□□□□□ -0.17
VPS9D1-201ENST00000389386 MTFMTQ96DP5 389 aaKnown RBP14.01□□□□□ -0.17
VPS9D1-201ENST00000389386 PDXPQ96GD0 296 aa14.01□□□□□ -0.17
VPS9D1-201ENST00000389386 KCTD7Q96MP8 289 aa14.01□□□□□ -0.17
VPS9D1-201ENST00000389386 NELL2Q99435 816 aa14.01□□□□□ -0.17
VPS9D1-201ENST00000389386 MAPKAP1Q9BPZ7 522 aa14.01□□□□□ -0.17
VPS9D1-201ENST00000389386 WACQ9BTA9 647 aa14.01□□□□□ -0.17
VPS9D1-201ENST00000389386 GHITMQ9H3K2 345 aa14.01□□□□□ -0.17
VPS9D1-201ENST00000389386 TSR3Q9UJK0 312 aaKnown RBP14.01□□□□□ -0.17
VPS9D1-201ENST00000389386 KLF2Q9Y5W3 355 aaPredicted RBP14.01□□□□□ -0.17
VPS9D1-201ENST00000389386 SNX11Q9Y5W9 270 aa14.01□□□□□ -0.17
VPS9D1-201ENST00000389386 PRAMEF33A0A0G2JMD5 474 aa14□□□□□ -0.17
VPS9D1-201ENST00000389386 hCG_1807616A0A1W2PRN6 198 aa14□□□□□ -0.17
VPS9D1-201ENST00000389386 HRO43593 1189 aa14□□□□□ -0.17
VPS9D1-201ENST00000389386 PRAMEF10O60809 474 aa14□□□□□ -0.17
VPS9D1-201ENST00000389386 NUDT7P0C024 238 aa14□□□□□ -0.17
VPS9D1-201ENST00000389386 ANXA3P12429 323 aa14□□□□□ -0.17
VPS9D1-201ENST00000389386 TNFRSF1BP20333 461 aa14□□□□□ -0.17
VPS9D1-201ENST00000389386 PTBP1P26599 531 aaKnown RBP eCLIP14□□□□□ -0.17
VPS9D1-201ENST00000389386 NUP62P37198 522 aaPredicted RBP14□□□□□ -0.17
VPS9D1-201ENST00000389386 GDF5P43026 501 aa14□□□□□ -0.17
VPS9D1-201ENST00000389386 ZNF81P51508 661 aa14□□□□□ -0.17
VPS9D1-201ENST00000389386 CAV3P56539 151 aa14□□□□□ -0.17
VPS9D1-201ENST00000389386 IL18Q14116 193 aa14□□□□□ -0.17
VPS9D1-201ENST00000389386 PAQR6Q6TCH4 344 aa14□□□□□ -0.17
VPS9D1-201ENST00000389386 ZNF621Q6ZSS3 439 aa14□□□□□ -0.17
VPS9D1-201ENST00000389386 MS4A15Q8N5U1 240 aa14□□□□□ -0.17
VPS9D1-201ENST00000389386 OR4K2Q8NGD2 314 aa14□□□□□ -0.17
VPS9D1-201ENST00000389386 OR52P1PQ8NH57 321 aa14□□□□□ -0.17
VPS9D1-201ENST00000389386 GTPBP3Q969Y2 492 aaKnown RBP14□□□□□ -0.17
VPS9D1-201ENST00000389386 PANX1Q96RD7 426 aa14□□□□□ -0.17
VPS9D1-201ENST00000389386 IL4I1Q96RQ9 567 aa14□□□□□ -0.17
VPS9D1-201ENST00000389386 ACPTQ9BZG2 426 aa14□□□□□ -0.17
VPS9D1-201ENST00000389386 RERGLQ9H628 205 aa14□□□□□ -0.17
VPS9D1-201ENST00000389386 ACTL7AQ9Y615 435 aa14□□□□□ -0.17
VPS9D1-201ENST00000389386 HS3ST4Q9Y661 456 aa14□□□□□ -0.17
VPS9D1-201ENST00000389386 ALPK3Q96L96 1907 aa14□□□□□ -0.17
VPS9D1-201ENST00000389386 PSIP1O75475 530 aaKnown RBP14□□□□□ -0.17
VPS9D1-201ENST00000389386 EPOP01588 193 aa14□□□□□ -0.17
VPS9D1-201ENST00000389386 STOMP27105 288 aa14□□□□□ -0.17
VPS9D1-201ENST00000389386 AQP1P29972 269 aa14□□□□□ -0.17
VPS9D1-201ENST00000389386 RPL9P32969 192 aaKnown RBP14□□□□□ -0.17
VPS9D1-201ENST00000389386 NNMTP40261 264 aa14□□□□□ -0.17
VPS9D1-201ENST00000389386 INPP1P49441 399 aa14□□□□□ -0.17
VPS9D1-201ENST00000389386 SPIBQ01892 262 aa14□□□□□ -0.17
VPS9D1-201ENST00000389386 DGKKQ5KSL6 1271 aa14□□□□□ -0.17
VPS9D1-201ENST00000389386 BCL2L15Q5TBC7 163 aa14□□□□□ -0.17
VPS9D1-201ENST00000389386 MSANTD1Q6ZTZ1 278 aa14□□□□□ -0.17
VPS9D1-201ENST00000389386 MRPL10Q7Z7H8 261 aaKnown RBP14□□□□□ -0.17
VPS9D1-201ENST00000389386 RTN4RL1Q86UN2 441 aaPredicted RBP14□□□□□ -0.17
VPS9D1-201ENST00000389386 SYT14Q8NB59 555 aa14□□□□□ -0.17
VPS9D1-201ENST00000389386 SLAIN1Q8ND83 568 aa14□□□□□ -0.17
VPS9D1-201ENST00000389386 SRFBP1Q8NEF9 429 aaKnown RBP14□□□□□ -0.17
VPS9D1-201ENST00000389386 DEFB118Q96PH6 123 aa14□□□□□ -0.17
VPS9D1-201ENST00000389386 LDHAL6BQ9BYZ2 381 aaPredicted RBP14□□□□□ -0.17
VPS9D1-201ENST00000389386 MS4A7Q9GZW8 240 aaPredicted RBP14□□□□□ -0.17
VPS9D1-201ENST00000389386 NMUR1Q9HB89 426 aa14□□□□□ -0.17
VPS9D1-201ENST00000389386 FNIP2Q9P278 1114 aa14□□□□□ -0.17
VPS9D1-201ENST00000389386 RAI2Q9Y5P3 530 aa14□□□□□ -0.17
VPS9D1-201ENST00000389386 COMMD10Q9Y6G5 202 aa14□□□□□ -0.17
VPS9D1-201ENST00000389386 RNF215Q9Y6U7 377 aa14□□□□□ -0.17
VPS9D1-201ENST00000389386 C7orf66A4D0T2 115 aa13.99□□□□□ -0.17
VPS9D1-201ENST00000389386 ZNF98A6NK75 572 aa13.99□□□□□ -0.17
VPS9D1-201ENST00000389386 LOC730098B7Z3J9 87 aa13.99□□□□□ -0.17
VPS9D1-201ENST00000389386 CBX4O00257 560 aa13.99□□□□□ -0.17
VPS9D1-201ENST00000389386 NUPL2O15504 423 aaKnown RBP13.99□□□□□ -0.17
VPS9D1-201ENST00000389386 GCM2O75603 506 aaPredicted RBP13.99□□□□□ -0.17
VPS9D1-201ENST00000389386 GUCA1CO95843 209 aa13.99□□□□□ -0.17
VPS9D1-201ENST00000389386 CHRM5P08912 532 aaPredicted RBP13.99□□□□□ -0.17
VPS9D1-201ENST00000389386 PRPS2P11908 318 aa13.99□□□□□ -0.17
VPS9D1-201ENST00000389386 TUSC3Q13454 348 aa13.99□□□□□ -0.17
VPS9D1-201ENST00000389386 GPR176Q14439 515 aa13.99□□□□□ -0.17
VPS9D1-201ENST00000389386 PLA1AQ53H76 456 aa13.99□□□□□ -0.17
VPS9D1-201ENST00000389386 ZNF57Q68EA5 555 aaPredicted RBP13.99□□□□□ -0.17
VPS9D1-201ENST00000389386 TMIGD1Q6UXZ0 262 aa13.99□□□□□ -0.17
VPS9D1-201ENST00000389386 ADGRF3Q8IZF5 1079 aa13.99□□□□□ -0.17
VPS9D1-201ENST00000389386 TTC9BQ8N6N2 239 aa13.99□□□□□ -0.17
VPS9D1-201ENST00000389386 KCNJ9Q92806 393 aa13.99□□□□□ -0.17
VPS9D1-201ENST00000389386 HGDQ93099 445 aa13.99□□□□□ -0.17
VPS9D1-201ENST00000389386 SCMH1Q96GD3 660 aa13.99□□□□□ -0.17
VPS9D1-201ENST00000389386 ACBD6Q9BR61 282 aa13.99□□□□□ -0.17
VPS9D1-201ENST00000389386 LDAHQ9H6V9 325 aa13.99□□□□□ -0.17
VPS9D1-201ENST00000389386 CSNK1G1Q9HCP0 422 aa13.99□□□□□ -0.17
VPS9D1-201ENST00000389386 COL4A4P53420 1690 aaPredicted RBP13.99□□□□□ -0.17
VPS9D1-201ENST00000389386 A0A1W2PQ45 241 aaPredicted RBP13.99□□□□□ -0.17
VPS9D1-201ENST00000389386 A0A1W2PQY0 241 aa13.99□□□□□ -0.17
VPS9D1-201ENST00000389386 RPL17P18621 184 aaKnown RBP13.99□□□□□ -0.17
VPS9D1-201ENST00000389386 SDC1P18827 310 aa13.99□□□□□ -0.17
VPS9D1-201ENST00000389386 CXCL3P19876 107 aa13.99□□□□□ -0.17
VPS9D1-201ENST00000389386 KIR3DL1P43629 444 aa13.99□□□□□ -0.17
VPS9D1-201ENST00000389386 PSAPL1Q6NUJ1 521 aa13.99□□□□□ -0.17
VPS9D1-201ENST00000389386 LRFN4Q6PJG9 635 aa13.99□□□□□ -0.17
VPS9D1-201ENST00000389386 KIAA0907Q7Z7F0 614 aaPredicted RBP13.99□□□□□ -0.17
VPS9D1-201ENST00000389386 GPR65Q8IYL9 337 aa13.99□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms