RNA–Protein interactions for RNA: ENST00000380393.7

PTPRA-204, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

TSL 1 (best) BASIC

Gene PTPRA, Length 3,636 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-204ENST00000380393 ADAT1Q9BUB4 502 aaKnown RBP8.97□□□□□ -0.97
PTPRA-204ENST00000380393 GGACTQ9BVM4 153 aa8.97□□□□□ -0.97
PTPRA-204ENST00000380393 XRN2Q9H0D6 950 aaKnown RBP eCLIP8.97□□□□□ -0.976e-7■□□□□ 10.8
PTPRA-204ENST00000380393 SDCBP2Q9H190 292 aa8.97□□□□□ -0.97
PTPRA-204ENST00000380393 NT5DC2Q9H857 520 aa8.97□□□□□ -0.97
PTPRA-204ENST00000380393 PRDM5Q9NQX1 630 aaPredicted RBP8.97□□□□□ -0.97
PTPRA-204ENST00000380393 MPP6Q9NZW5 540 aa8.97□□□□□ -0.97
PTPRA-204ENST00000380393 SH3BP4Q9P0V3 963 aa8.97□□□□□ -0.97
PTPRA-204ENST00000380393 MAGEL2Q9UJ55 1249 aa8.97□□□□□ -0.97
PTPRA-204ENST00000380393 POLR3HQ9Y535 204 aaPredicted RBP8.97□□□□□ -0.97
PTPRA-204ENST00000380393 OAS3Q9Y6K5 1087 aaKnown RBP8.97□□□□□ -0.97
PTPRA-204ENST00000380393 A0A1B0GVI7 797 aa8.97□□□□□ -0.97
PTPRA-204ENST00000380393 L7N2F9 121 aa8.97□□□□□ -0.97
PTPRA-204ENST00000380393 CCR7P32248 378 aa8.97□□□□□ -0.97
PTPRA-204ENST00000380393 PPM1AP35813 382 aa8.97□□□□□ -0.97
PTPRA-204ENST00000380393 EEFSECP57772 596 aaKnown RBP8.97□□□□□ -0.97
PTPRA-204ENST00000380393 BTG1P62324 171 aa8.97□□□□□ -0.97
PTPRA-204ENST00000380393 FOXM1Q08050 763 aa8.97□□□□□ -0.97
PTPRA-204ENST00000380393 TRAM1Q15629 374 aa8.97□□□□□ -0.97
PTPRA-204ENST00000380393 ZNF648Q5T619 568 aaPredicted RBP8.97□□□□□ -0.97
PTPRA-204ENST00000380393 SSX6Q7RTT6 188 aa8.97□□□□□ -0.97
PTPRA-204ENST00000380393 CLEC14AQ86T13 490 aa8.97□□□□□ -0.97
PTPRA-204ENST00000380393 ADHFE1Q8IWW8 467 aa8.97□□□□□ -0.97
PTPRA-204ENST00000380393 SPATA6LQ8N4H0 392 aa8.97□□□□□ -0.97
PTPRA-204ENST00000380393 DNAJC22Q8N4W6 341 aa8.97□□□□□ -0.97
PTPRA-204ENST00000380393 THAP6Q8TBB0 222 aa8.97□□□□□ -0.97
PTPRA-204ENST00000380393 ELMOD3Q96FG2 381 aa8.97□□□□□ -0.97
PTPRA-204ENST00000380393 PKP4Q99569 1192 aa8.97□□□□□ -0.97
PTPRA-204ENST00000380393 CPNE1Q99829 537 aa8.97□□□□□ -0.97
PTPRA-204ENST00000380393 OMDQ99983 421 aa8.97□□□□□ -0.97
PTPRA-204ENST00000380393 EDEM2Q9BV94 578 aa8.97□□□□□ -0.97
PTPRA-204ENST00000380393 MEAF6Q9HAF1 191 aa8.97□□□□□ -0.97
PTPRA-204ENST00000380393 SLC9A8Q9Y2E8 581 aa8.97□□□□□ -0.97
PTPRA-204ENST00000380393 PLEKHA6Q9Y2H5 1048 aa8.97□□□□□ -0.97
PTPRA-204ENST00000380393 LOC105369274A0A096LPK9 316 aa8.97□□□□□ -0.97
PTPRA-204ENST00000380393 LRIT2A6NDA9 550 aa8.97□□□□□ -0.97
PTPRA-204ENST00000380393 RFPL4AA6NLU0 287 aa8.97□□□□□ -0.97
PTPRA-204ENST00000380393 RFPL4AL1F8VTS6 287 aa8.97□□□□□ -0.97
PTPRA-204ENST00000380393 PMM2O15305 246 aa8.97□□□□□ -0.97
PTPRA-204ENST00000380393 PSMD3O43242 534 aa8.97□□□□□ -0.97
PTPRA-204ENST00000380393 DLX3O60479 287 aa8.97□□□□□ -0.97
PTPRA-204ENST00000380393 SLC34A2O95436 690 aa8.97□□□□□ -0.97
PTPRA-204ENST00000380393 GLUD1P00367 558 aa8.97□□□□□ -0.97
PTPRA-204ENST00000380393 MAPTP10636 758 aaKnown RBP8.97□□□□□ -0.97
PTPRA-204ENST00000380393 ANXA7P20073 488 aaKnown RBP8.97□□□□□ -0.97
PTPRA-204ENST00000380393 HTR1EP28566 365 aa8.97□□□□□ -0.97
PTPRA-204ENST00000380393 SFNP31947 248 aa8.97□□□□□ -0.97
PTPRA-204ENST00000380393 MAT1AQ00266 395 aaKnown RBP8.97□□□□□ -0.97
PTPRA-204ENST00000380393 HABP2Q14520 560 aaPredicted RBP8.97□□□□□ -0.97
PTPRA-204ENST00000380393 GRIN2CQ14957 1233 aa8.97□□□□□ -0.97
PTPRA-204ENST00000380393 LAPTM4AQ15012 233 aa8.97□□□□□ -0.97
PTPRA-204ENST00000380393 MED22Q15528 200 aa8.97□□□□□ -0.97
PTPRA-204ENST00000380393 KRBOX4Q5JUW0 171 aa8.97□□□□□ -0.97
PTPRA-204ENST00000380393 MLIPQ5VWP3 458 aa8.97□□□□□ -0.97
PTPRA-204ENST00000380393 HEATR6Q6AI08 1181 aaKnown RBP8.97□□□□□ -0.97
PTPRA-204ENST00000380393 ETV3LQ6ZN32 361 aa8.97□□□□□ -0.97
PTPRA-204ENST00000380393 SERPINA12Q8IW75 414 aa8.97□□□□□ -0.97
PTPRA-204ENST00000380393 OR4N4Q8N0Y3 316 aa8.97□□□□□ -0.97
PTPRA-204ENST00000380393 WDTC1Q8N5D0 677 aa8.97□□□□□ -0.97
PTPRA-204ENST00000380393 CHST14Q8NCH0 376 aa8.97□□□□□ -0.97
PTPRA-204ENST00000380393 BPIFCQ8NFQ6 507 aa8.97□□□□□ -0.97
PTPRA-204ENST00000380393 OR1S1Q8NH92 325 aa8.97□□□□□ -0.97
PTPRA-204ENST00000380393 GPR152Q8TDT2 470 aa8.97□□□□□ -0.97
PTPRA-204ENST00000380393 BSCL2Q96G97 398 aaPredicted RBP8.97□□□□□ -0.97
PTPRA-204ENST00000380393 LRR1Q96L50 414 aa8.97□□□□□ -0.97
PTPRA-204ENST00000380393 SARGQ9BW04 601 aa8.97□□□□□ -0.97
PTPRA-204ENST00000380393 POLR3FQ9H1D9 316 aaPredicted RBP8.97□□□□□ -0.97
PTPRA-204ENST00000380393 OR51J1Q9H342 316 aa8.97□□□□□ -0.97
PTPRA-204ENST00000380393 GFOD1Q9NXC2 390 aa8.97□□□□□ -0.97
PTPRA-204ENST00000380393 SCP2D1Q9UJQ7 156 aa8.97□□□□□ -0.97
PTPRA-204ENST00000380393 ADAM28Q9UKQ2 775 aa8.97□□□□□ -0.97
PTPRA-204ENST00000380393 DUSP12Q9UNI6 340 aa8.97□□□□□ -0.97
PTPRA-204ENST00000380393 WASH4PA8MWX3 477 aa8.96□□□□□ -0.97
PTPRA-204ENST00000380393 ALDOCP09972 364 aaKnown RBP8.96□□□□□ -0.97
PTPRA-204ENST00000380393 MLNP12872 115 aa8.96□□□□□ -0.97
PTPRA-204ENST00000380393 MAGEA3P43357 314 aa8.96□□□□□ -0.97
PTPRA-204ENST00000380393 OLIG2Q13516 323 aa8.96□□□□□ -0.97
PTPRA-204ENST00000380393 KEAP1Q14145 624 aa8.96□□□□□ -0.97
PTPRA-204ENST00000380393 DDI2Q5TDH0 399 aa8.96□□□□□ -0.97
PTPRA-204ENST00000380393 SWSAP1Q6NVH7 229 aa8.96□□□□□ -0.97
PTPRA-204ENST00000380393 ENPP6Q6UWR7 440 aa8.96□□□□□ -0.97
PTPRA-204ENST00000380393 PGAP1Q75T13 922 aa8.96□□□□□ -0.97
PTPRA-204ENST00000380393 TAS1R3Q7RTX0 852 aa8.96□□□□□ -0.97
PTPRA-204ENST00000380393 LHFPL3Q86UP9 236 aa8.96□□□□□ -0.97
PTPRA-204ENST00000380393 CDKL3Q8IVW4 592 aaPredicted RBP8.96□□□□□ -0.97
PTPRA-204ENST00000380393 MIER2Q8N344 545 aa8.96□□□□□ -0.97
PTPRA-204ENST00000380393 TMEM130Q8N3G9 435 aa8.96□□□□□ -0.97
PTPRA-204ENST00000380393 PQLC3Q8N755 202 aa8.96□□□□□ -0.97
PTPRA-204ENST00000380393 TRPV1Q8NER1 839 aa8.96□□□□□ -0.97
PTPRA-204ENST00000380393 NTAN1Q96AB6 310 aa8.96□□□□□ -0.97
PTPRA-204ENST00000380393 KIF12Q96FN5 646 aa8.96□□□□□ -0.97
PTPRA-204ENST00000380393 RBBP8Q99708 897 aa8.96□□□□□ -0.97
PTPRA-204ENST00000380393 ZNF559Q9BR84 538 aa8.96□□□□□ -0.97
PTPRA-204ENST00000380393 GORASP2Q9H8Y8 452 aa8.96□□□□□ -0.97
PTPRA-204ENST00000380393 DLL4Q9NR61 685 aa8.96□□□□□ -0.97
PTPRA-204ENST00000380393 GLRX2Q9NS18 164 aa8.96□□□□□ -0.97
PTPRA-204ENST00000380393 C19orf12Q9NSK7 152 aa8.96□□□□□ -0.97
PTPRA-204ENST00000380393 ZFP57Q9NU63 452 aa8.96□□□□□ -0.97
PTPRA-204ENST00000380393 KLHL9Q9P2J3 617 aa8.96□□□□□ -0.97
PTPRA-204ENST00000380393 RCOR3Q9P2K3 495 aaPredicted RBP8.96□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms