RNA–Protein interactions for RNA: ENST00000377797.7

TCOF1-202, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TCOF1, Length 5,095 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-202ENST00000377797 OR4C6Q8NH72 309 aa13.84□□□□□ -0.19
TCOF1-202ENST00000377797 RFKQ969G6 155 aa13.84□□□□□ -0.19
TCOF1-202ENST00000377797 IFT27Q9BW83 186 aa13.84□□□□□ -0.19
TCOF1-202ENST00000377797 SOCS2O14508 198 aa13.84□□□□□ -0.19
TCOF1-202ENST00000377797 TUBB3Q13509 450 aa13.84□□□□□ -0.19
TCOF1-202ENST00000377797 SLCO6A1Q86UG4 719 aa13.84□□□□□ -0.19
TCOF1-202ENST00000377797 FCRL4Q96PJ5 515 aa13.84□□□□□ -0.19
TCOF1-202ENST00000377797 KCNK12Q9HB15 430 aa13.84□□□□□ -0.19
TCOF1-202ENST00000377797 ASB1Q9Y576 335 aa13.84□□□□□ -0.19
TCOF1-202ENST00000377797 CPSF4LA6NMK7 179 aaKnown RBP13.84□□□□□ -0.19
TCOF1-202ENST00000377797 LINC01565O15544 149 aa13.84□□□□□ -0.19
TCOF1-202ENST00000377797 EGFP01133 1207 aa13.84□□□□□ -0.19
TCOF1-202ENST00000377797 KIAA1614Q5VZ46 1190 aa13.84□□□□□ -0.19
TCOF1-202ENST00000377797 FAM220AQ7Z4H9 259 aa13.84□□□□□ -0.19
TCOF1-202ENST00000377797 MCFD2Q8NI22 146 aa13.84□□□□□ -0.19
TCOF1-202ENST00000377797 PTCHD1Q96NR3 888 aa13.84□□□□□ -0.19
TCOF1-202ENST00000377797 RDH12Q96NR8 316 aa13.84□□□□□ -0.19
TCOF1-202ENST00000377797 CHCHD6Q9BRQ6 235 aa13.84□□□□□ -0.19
TCOF1-202ENST00000377797 ARMC1Q9NVT9 282 aa13.84□□□□□ -0.19
TCOF1-202ENST00000377797 ACTR10Q9NZ32 417 aa13.84□□□□□ -0.19
TCOF1-202ENST00000377797 BMP2P12643 396 aa13.84□□□□□ -0.19
TCOF1-202ENST00000377797 RNH1P13489 461 aaKnown RBP13.84□□□□□ -0.19
TCOF1-202ENST00000377797 F3P13726 295 aa13.84□□□□□ -0.19
TCOF1-202ENST00000377797 TAS2R38P59533 333 aa13.84□□□□□ -0.19
TCOF1-202ENST00000377797 MRPL28Q13084 256 aaKnown RBP13.84□□□□□ -0.19
TCOF1-202ENST00000377797 COMMD2Q86X83 199 aa13.84□□□□□ -0.19
TCOF1-202ENST00000377797 PELI3Q8N2H9 469 aa13.84□□□□□ -0.19
TCOF1-202ENST00000377797 PUM2Q8TB72 1066 aaKnown RBP eCLIP13.84□□□□□ -0.199e-8■□□□□ 8.4
TCOF1-202ENST00000377797 NRG4Q8WWG1 115 aa13.84□□□□□ -0.19
TCOF1-202ENST00000377797 TBL1XR1Q9BZK7 514 aa13.84□□□□□ -0.19
TCOF1-202ENST00000377797 EHD3Q9NZN3 535 aa13.84□□□□□ -0.19
TCOF1-202ENST00000377797 BTNL2Q9UIR0 455 aa13.84□□□□□ -0.19
TCOF1-202ENST00000377797 CLEC3AO75596 197 aa13.83□□□□□ -0.2
TCOF1-202ENST00000377797 MAOBP27338 520 aa13.83□□□□□ -0.2
TCOF1-202ENST00000377797 FCHO2Q0JRZ9 810 aa13.83□□□□□ -0.2
TCOF1-202ENST00000377797 RPE65Q16518 533 aa13.83□□□□□ -0.2
TCOF1-202ENST00000377797 TRIM46Q7Z4K8 759 aa13.83□□□□□ -0.2
TCOF1-202ENST00000377797 ADGRG5Q8IZF4 528 aa13.83□□□□□ -0.2
TCOF1-202ENST00000377797 ZNF671Q8TAW3 534 aa13.83□□□□□ -0.2
TCOF1-202ENST00000377797 TESCQ96BS2 214 aa13.83□□□□□ -0.2
TCOF1-202ENST00000377797 ECHDC3Q96DC8 303 aa13.83□□□□□ -0.2
TCOF1-202ENST00000377797 MCHR1Q99705 422 aa13.83□□□□□ -0.2
TCOF1-202ENST00000377797 SLITRK2Q9H156 845 aa13.83□□□□□ -0.2
TCOF1-202ENST00000377797 LIPT1Q9Y234 373 aa13.83□□□□□ -0.2
TCOF1-202ENST00000377797 ENTPD2Q9Y5L3 495 aa13.83□□□□□ -0.2
TCOF1-202ENST00000377797 PTPRZ1P23471 2315 aaPredicted RBP13.83□□□□□ -0.2
TCOF1-202ENST00000377797 SEMA3DO95025 777 aa13.83□□□□□ -0.2
TCOF1-202ENST00000377797 RETP07949 1114 aa13.83□□□□□ -0.2
TCOF1-202ENST00000377797 CERS1P27544 350 aa13.83□□□□□ -0.2
TCOF1-202ENST00000377797 GRK6P43250 576 aa13.83□□□□□ -0.2
TCOF1-202ENST00000377797 PCDH1Q08174 1060 aa13.83□□□□□ -0.2
TCOF1-202ENST00000377797 ENPP2Q13822 863 aa13.83□□□□□ -0.2
TCOF1-202ENST00000377797 KIR2DS3Q14952 304 aa13.83□□□□□ -0.2
TCOF1-202ENST00000377797 BCL7AQ4VC05 210 aa13.83□□□□□ -0.2
TCOF1-202ENST00000377797 BBS10Q8TAM1 723 aa13.83□□□□□ -0.2
TCOF1-202ENST00000377797 TMEM19Q96HH6 336 aa13.83□□□□□ -0.2
TCOF1-202ENST00000377797 TMEM168Q9H0V1 697 aa13.83□□□□□ -0.2
TCOF1-202ENST00000377797 ACTL8Q9H568 366 aa13.83□□□□□ -0.2
TCOF1-202ENST00000377797 CRNNQ9UBG3 495 aaPredicted RBP13.83□□□□□ -0.2
TCOF1-202ENST00000377797 PLXNA1Q9UIW2 1896 aa13.83□□□□□ -0.2
TCOF1-202ENST00000377797 TRBV5-4A0A0C4DH59 114 aa13.83□□□□□ -0.2
TCOF1-202ENST00000377797 CTSLP07711 333 aa13.83□□□□□ -0.2
TCOF1-202ENST00000377797 GSTM3P21266 225 aa13.83□□□□□ -0.2
TCOF1-202ENST00000377797 MASP1P48740 699 aa13.83□□□□□ -0.2
TCOF1-202ENST00000377797 RAPSNQ13702 412 aa13.83□□□□□ -0.2
TCOF1-202ENST00000377797 FGF14Q92915 247 aa13.83□□□□□ -0.2
TCOF1-202ENST00000377797 SERHL2Q9H4I8 314 aa13.83□□□□□ -0.2
TCOF1-202ENST00000377797 TNFRSF12AQ9NP84 129 aa13.83□□□□□ -0.2
TCOF1-202ENST00000377797 SERHLQ9NQF3 203 aa13.83□□□□□ -0.2
TCOF1-202ENST00000377797 MBNL1Q9NR56 388 aaKnown RBP13.83□□□□□ -0.2
TCOF1-202ENST00000377797 MAP10Q9P2G4 905 aa13.83□□□□□ -0.2
TCOF1-202ENST00000377797 SLC5A10A0PJK1 596 aa13.83□□□□□ -0.2
TCOF1-202ENST00000377797 TLR4O00206 839 aa13.83□□□□□ -0.2
TCOF1-202ENST00000377797 PROS1P07225 676 aa13.83□□□□□ -0.2
TCOF1-202ENST00000377797 CHRM5P08912 532 aaPredicted RBP13.83□□□□□ -0.2
TCOF1-202ENST00000377797 DDCP20711 480 aa13.83□□□□□ -0.2
TCOF1-202ENST00000377797 BLVRAP53004 296 aa13.83□□□□□ -0.2
TCOF1-202ENST00000377797 PFN3P60673 137 aa13.83□□□□□ -0.2
TCOF1-202ENST00000377797 SHC2P98077 582 aa13.83□□□□□ -0.2
TCOF1-202ENST00000377797 TRIQKQ629K1 86 aa13.83□□□□□ -0.2
TCOF1-202ENST00000377797 TMPRSS11AQ6ZMR5 421 aa13.83□□□□□ -0.2
TCOF1-202ENST00000377797 CACTIN-AS1Q8N1I8 211 aa13.83□□□□□ -0.2
TCOF1-202ENST00000377797 ACOT4Q8N9L9 421 aa13.83□□□□□ -0.2
TCOF1-202ENST00000377797 OR2L5Q8NG80 312 aa13.83□□□□□ -0.2
TCOF1-202ENST00000377797 IPCEF1Q8WWN9 437 aaPredicted RBP13.83□□□□□ -0.2
TCOF1-202ENST00000377797 SLC29A1Q99808 456 aa13.83□□□□□ -0.2
TCOF1-202ENST00000377797 MAPKAP1Q9BPZ7 522 aa13.83□□□□□ -0.2
TCOF1-202ENST00000377797 SLC6A16Q9GZN6 736 aa13.83□□□□□ -0.2
TCOF1-202ENST00000377797 MKKSQ9NPJ1 570 aaPredicted RBP13.83□□□□□ -0.2
TCOF1-202ENST00000377797 CFL2Q9Y281 166 aa13.83□□□□□ -0.2
TCOF1-202ENST00000377797 WDR90Q96KV7 1748 aa13.82□□□□□ -0.2
TCOF1-202ENST00000377797 ZNF99A8MXY4 864 aaPredicted RBP13.82□□□□□ -0.2
TCOF1-202ENST00000377797 ANHXE9PGG2 379 aa13.82□□□□□ -0.2
TCOF1-202ENST00000377797 ZNF195O14628 629 aa13.82□□□□□ -0.2
TCOF1-202ENST00000377797 LAMTOR5O43504 91 aa13.82□□□□□ -0.2
TCOF1-202ENST00000377797 AIREO43918 545 aa13.82□□□□□ -0.2
TCOF1-202ENST00000377797 ZNF821O75541 412 aaPredicted RBP13.82□□□□□ -0.2
TCOF1-202ENST00000377797 APBB3O95704 486 aa13.82□□□□□ -0.2
TCOF1-202ENST00000377797 C8BP07358 591 aa13.82□□□□□ -0.2
TCOF1-202ENST00000377797 TCEA1P23193 301 aaKnown RBP13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms