RNA–Protein interactions for RNA: ENST00000377340.6

CRNKL1-202, Transcript of crooked neck pre-mRNA splicing factor 1, humanhuman

TSL 1 (best) BASIC

Gene CRNKL1, Length 4,406 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNKL1-202ENST00000377340 ZXDAP98168 799 aa8.06□□□□□ -1.12
CRNKL1-202ENST00000377340 RUNX1T1Q06455 604 aa8.06□□□□□ -1.12
CRNKL1-202ENST00000377340 IFI44LQ53G44 452 aa8.06□□□□□ -1.12
CRNKL1-202ENST00000377340 GRHL2Q6ISB3 625 aa8.06□□□□□ -1.12
CRNKL1-202ENST00000377340 NIPAL1Q6NVV3 410 aa8.06□□□□□ -1.12
CRNKL1-202ENST00000377340 LCTLQ6UWM7 567 aa8.06□□□□□ -1.12
CRNKL1-202ENST00000377340 BNIPLQ7Z465 357 aa8.06□□□□□ -1.12
CRNKL1-202ENST00000377340 PROSER1Q86XN7 944 aa8.06□□□□□ -1.12
CRNKL1-202ENST00000377340 HIST2H2ABQ8IUE6 130 aaPredicted RBP8.06□□□□□ -1.12
CRNKL1-202ENST00000377340 OR2L5Q8NG80 312 aa8.06□□□□□ -1.12
CRNKL1-202ENST00000377340 COQ10AQ96MF6 247 aa8.06□□□□□ -1.12
CRNKL1-202ENST00000377340 SDHAF3Q9NRP4 125 aa8.06□□□□□ -1.12
CRNKL1-202ENST00000377340 ENOPH1Q9UHY7 261 aa8.06□□□□□ -1.12
CRNKL1-202ENST00000377340 IKZF3Q9UKT9 509 aa8.06□□□□□ -1.12
CRNKL1-202ENST00000377340 INTS1Q8N201 2190 aaKnown RBP8.06□□□□□ -1.12
CRNKL1-202ENST00000377340 CACNA1AO00555 2505 aa8.06□□□□□ -1.12
CRNKL1-202ENST00000377340 M0R3G1 203 aa8.06□□□□□ -1.12
CRNKL1-202ENST00000377340 FABP3P05413 133 aa8.06□□□□□ -1.12
CRNKL1-202ENST00000377340 OR1E2P47887 323 aa8.06□□□□□ -1.12
CRNKL1-202ENST00000377340 EEF1A2Q05639 463 aaKnown RBP8.06□□□□□ -1.12
CRNKL1-202ENST00000377340 GRIK2Q13002 908 aa8.06□□□□□ -1.12
CRNKL1-202ENST00000377340 CLEC12AQ5QGZ9 265 aa8.06□□□□□ -1.12
CRNKL1-202ENST00000377340 ARMC3Q5W041 872 aa8.06□□□□□ -1.12
CRNKL1-202ENST00000377340 OR5M10Q6IEU7 315 aa8.06□□□□□ -1.12
CRNKL1-202ENST00000377340 NUP54Q7Z3B4 507 aa8.06□□□□□ -1.12
CRNKL1-202ENST00000377340 C6orf120Q7Z4R8 191 aa8.06□□□□□ -1.12
CRNKL1-202ENST00000377340 TECPR1Q7Z6L1 1165 aa8.06□□□□□ -1.12
CRNKL1-202ENST00000377340 GPAT4Q86UL3 456 aa8.06□□□□□ -1.12
CRNKL1-202ENST00000377340 SNIP1Q8TAD8 396 aaKnown RBP8.06□□□□□ -1.12
CRNKL1-202ENST00000377340 PUM2Q8TB72 1066 aaKnown RBP eCLIP8.06□□□□□ -1.12
CRNKL1-202ENST00000377340 DKKL1Q9UK85 242 aa8.06□□□□□ -1.12
CRNKL1-202ENST00000377340 ERVK-19Q9WJR5 959 aa8.06□□□□□ -1.12
CRNKL1-202ENST00000377340 TRBC2A0A5B9 178 aa8.06□□□□□ -1.12
CRNKL1-202ENST00000377340 H7C0S8 307 aa8.06□□□□□ -1.12
CRNKL1-202ENST00000377340 ADAM23O75077 832 aa8.06□□□□□ -1.12
CRNKL1-202ENST00000377340 PRKD3O94806 890 aa8.06□□□□□ -1.12
CRNKL1-202ENST00000377340 CSTAP01040 98 aa8.06□□□□□ -1.12
CRNKL1-202ENST00000377340 HOXC12P31275 282 aa8.06□□□□□ -1.12
CRNKL1-202ENST00000377340 CTSKP43235 329 aa8.06□□□□□ -1.12
CRNKL1-202ENST00000377340 KIAA1024LP59773 190 aa8.06□□□□□ -1.12
CRNKL1-202ENST00000377340 ARG2P78540 354 aa8.06□□□□□ -1.12
CRNKL1-202ENST00000377340 SRYQ05066 204 aa8.06□□□□□ -1.12
CRNKL1-202ENST00000377340 TRIM25Q14258 630 aaKnown RBP8.06□□□□□ -1.12
CRNKL1-202ENST00000377340 ZNF544Q6NX49 715 aa8.06□□□□□ -1.12
CRNKL1-202ENST00000377340 ZFAND4Q86XD8 727 aa8.06□□□□□ -1.12
CRNKL1-202ENST00000377340 C16orf78Q8WTQ4 265 aa8.06□□□□□ -1.12
CRNKL1-202ENST00000377340 DTNBP1Q96EV8 351 aa8.06□□□□□ -1.12
CRNKL1-202ENST00000377340 KCNS3Q9BQ31 491 aa8.06□□□□□ -1.12
CRNKL1-202ENST00000377340 DPH2Q9BQC3 489 aaPredicted RBP8.06□□□□□ -1.12
CRNKL1-202ENST00000377340 OR51V1Q9H2C8 321 aa8.06□□□□□ -1.12
CRNKL1-202ENST00000377340 GPRC5BQ9NZH0 403 aa8.06□□□□□ -1.12
CRNKL1-202ENST00000377340 RHCGQ9UBD6 479 aa8.06□□□□□ -1.12
CRNKL1-202ENST00000377340 IKZF2Q9UKS7 526 aa8.06□□□□□ -1.12
CRNKL1-202ENST00000377340 ROS1P08922 2347 aa8.05□□□□□ -1.12
CRNKL1-202ENST00000377340 NSG1A0A0A6YYJ2 146 aa8.05□□□□□ -1.12
CRNKL1-202ENST00000377340 A8MVJ9 347 aa8.05□□□□□ -1.12
CRNKL1-202ENST00000377340 WWP2O00308 870 aa8.05□□□□□ -1.12
CRNKL1-202ENST00000377340 ARHGAP33O14559 1287 aa8.05□□□□□ -1.12
CRNKL1-202ENST00000377340 PLD2O14939 933 aa8.05□□□□□ -1.12
CRNKL1-202ENST00000377340 YKT6O15498 198 aa8.05□□□□□ -1.12
CRNKL1-202ENST00000377340 GADD45GO95257 159 aa8.05□□□□□ -1.12
CRNKL1-202ENST00000377340 GIMD1P0DJR0 217 aa8.05□□□□□ -1.12
CRNKL1-202ENST00000377340 PRG2P13727 222 aa8.05□□□□□ -1.12
CRNKL1-202ENST00000377340 ADSLP30566 484 aaPredicted RBP8.05□□□□□ -1.12
CRNKL1-202ENST00000377340 KIR2DL1P43626 348 aaPredicted RBP8.05□□□□□ -1.12
CRNKL1-202ENST00000377340 ZP2Q05996 745 aa8.05□□□□□ -1.12
CRNKL1-202ENST00000377340 TARDBPQ13148 414 aaKnown RBP eCLIP8.05□□□□□ -1.12
CRNKL1-202ENST00000377340 NEDD8Q15843 81 aa8.05□□□□□ -1.12
CRNKL1-202ENST00000377340 SNAPC1Q16533 368 aa8.05□□□□□ -1.12
CRNKL1-202ENST00000377340 CTC1Q2NKJ3 1217 aa8.05□□□□□ -1.12
CRNKL1-202ENST00000377340 LINC00696Q6ZRV3 163 aa8.05□□□□□ -1.12
CRNKL1-202ENST00000377340 OR5L2Q8NGL0 311 aa8.05□□□□□ -1.12
CRNKL1-202ENST00000377340 RASSF5Q8WWW0 418 aa8.05□□□□□ -1.12
CRNKL1-202ENST00000377340 ASB15Q8WXK1 588 aa8.05□□□□□ -1.12
CRNKL1-202ENST00000377340 TCTN2Q96GX1 697 aa8.05□□□□□ -1.12
CRNKL1-202ENST00000377340 SLC45A3Q96JT2 553 aa8.05□□□□□ -1.12
CRNKL1-202ENST00000377340 ELL3Q9HB65 397 aaPredicted RBP8.05□□□□□ -1.12
CRNKL1-202ENST00000377340 TRPV4Q9HBA0 871 aa8.05□□□□□ -1.12
CRNKL1-202ENST00000377340 SLAMF7Q9NQ25 335 aa8.05□□□□□ -1.12
CRNKL1-202ENST00000377340 C1GALT1Q9NS00 363 aa8.05□□□□□ -1.12
CRNKL1-202ENST00000377340 HPF1Q9NWY4 346 aa8.05□□□□□ -1.12
CRNKL1-202ENST00000377340 DLGAP2Q9P1A6 1054 aa8.05□□□□□ -1.12
CRNKL1-202ENST00000377340 WDR37Q9Y2I8 494 aa8.05□□□□□ -1.12
CRNKL1-202ENST00000377340 KRBA1A5PL33 1030 aa8.05□□□□□ -1.12
CRNKL1-202ENST00000377340 PRORSD1PA6NEY8 169 aa8.05□□□□□ -1.12
CRNKL1-202ENST00000377340 G3V2T6 193 aa8.05□□□□□ -1.12
CRNKL1-202ENST00000377340 KLF11O14901 512 aa8.05□□□□□ -1.12
CRNKL1-202ENST00000377340 HAT1O14929 419 aa8.05□□□□□ -1.12
CRNKL1-202ENST00000377340 SCELO95171 688 aa8.05□□□□□ -1.12
CRNKL1-202ENST00000377340 PEX11BO96011 259 aa8.05□□□□□ -1.12
CRNKL1-202ENST00000377340 HSD3B1P14060 373 aa8.05□□□□□ -1.12
CRNKL1-202ENST00000377340 HSD3B2P26439 372 aa8.05□□□□□ -1.12
CRNKL1-202ENST00000377340 ADARP55265 1226 aaKnown RBP8.05□□□□□ -1.12
CRNKL1-202ENST00000377340 DPTQ07507 201 aa8.05□□□□□ -1.12
CRNKL1-202ENST00000377340 C10orf62Q5T681 223 aaPredicted RBP8.05□□□□□ -1.12
CRNKL1-202ENST00000377340 RAET1LQ5VY80 246 aa8.05□□□□□ -1.12
CRNKL1-202ENST00000377340 LARP4Q71RC2 724 aaKnown RBP eCLIP8.05□□□□□ -1.12
CRNKL1-202ENST00000377340 CNTN4Q8IWV2 1026 aa8.05□□□□□ -1.12
CRNKL1-202ENST00000377340 OR2L8Q8NGY9 312 aa8.05□□□□□ -1.12
CRNKL1-202ENST00000377340 FATE1Q969F0 183 aa8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms