RNA–Protein interactions for RNA: ENST00000376643.6

HDAC6-204, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 907 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-204ENST00000376643 F2RL3Q96RI0 385 aa13.69□□□□□ -0.22
HDAC6-204ENST00000376643 CSF3RQ99062 836 aa13.69□□□□□ -0.22
HDAC6-204ENST00000376643 MS4A8Q9BY19 250 aa13.69□□□□□ -0.22
HDAC6-204ENST00000376643 RAB17Q9H0T7 212 aa13.69□□□□□ -0.22
HDAC6-204ENST00000376643 CAB39LQ9H9S4 337 aa13.69□□□□□ -0.22
HDAC6-204ENST00000376643 IL1RL2Q9HB29 575 aa13.69□□□□□ -0.22
HDAC6-204ENST00000376643 PRDM7Q9NQW5 492 aa13.69□□□□□ -0.22
HDAC6-204ENST00000376643 ZNF490Q9ULM2 529 aaPredicted RBP13.69□□□□□ -0.22
HDAC6-204ENST00000376643 ANGPTL3Q9Y5C1 460 aa13.69□□□□□ -0.22
HDAC6-204ENST00000376643 CLDN16Q9Y5I7 305 aa13.69□□□□□ -0.22
HDAC6-204ENST00000376643 SUPT3HB4E1H0 165 aa13.68□□□□□ -0.22
HDAC6-204ENST00000376643 C19orf84I3L1E1 186 aa13.68□□□□□ -0.22
HDAC6-204ENST00000376643 K7EPI3 171 aa13.68□□□□□ -0.22
HDAC6-204ENST00000376643 WWP2O00308 870 aa13.68□□□□□ -0.22
HDAC6-204ENST00000376643 KERAO60938 352 aa13.68□□□□□ -0.22
HDAC6-204ENST00000376643 SUPT3HO75486 399 aa13.68□□□□□ -0.22
HDAC6-204ENST00000376643 OR6B1O95007 311 aa13.68□□□□□ -0.22
HDAC6-204ENST00000376643 LTA4HP09960 611 aaKnown RBP13.68□□□□□ -0.22
HDAC6-204ENST00000376643 PCNAP12004 261 aa13.68□□□□□ -0.22
HDAC6-204ENST00000376643 EPB42P16452 691 aa13.68□□□□□ -0.22
HDAC6-204ENST00000376643 ATP5A1P25705 553 aaKnown RBP13.68□□□□□ -0.22
HDAC6-204ENST00000376643 PEX19P40855 299 aa13.68□□□□□ -0.22
HDAC6-204ENST00000376643 BUD31P41223 144 aaPredicted RBP13.68□□□□□ -0.22
HDAC6-204ENST00000376643 SOX3P41225 446 aa13.68□□□□□ -0.22
HDAC6-204ENST00000376643 PIK3CBP42338 1070 aa13.68□□□□□ -0.22
HDAC6-204ENST00000376643 KIR3DL1P43629 444 aa13.68□□□□□ -0.22
HDAC6-204ENST00000376643 STT3AP46977 705 aa13.68□□□□□ -0.22
HDAC6-204ENST00000376643 PIK3CGP48736 1102 aa13.68□□□□□ -0.22
HDAC6-204ENST00000376643 HNRNPFP52597 415 aaKnown RBP13.68□□□□□ -0.22
HDAC6-204ENST00000376643 GTF3C1Q12789 2109 aa13.68□□□□□ -0.22
HDAC6-204ENST00000376643 SLMAPQ14BN4 828 aa13.68□□□□□ -0.22
HDAC6-204ENST00000376643 OR4D1Q15615 310 aa13.68□□□□□ -0.22
HDAC6-204ENST00000376643 CEP128Q6ZU80 1094 aa13.68□□□□□ -0.22
HDAC6-204ENST00000376643 FAM47EQ6ZV65 393 aa13.68□□□□□ -0.22
HDAC6-204ENST00000376643 VN1R5Q7Z5H4 357 aa13.68□□□□□ -0.22
HDAC6-204ENST00000376643 CLYBLQ8N0X4 340 aa13.68□□□□□ -0.22
HDAC6-204ENST00000376643 TMEM52Q8NDY8 209 aa13.68□□□□□ -0.22
HDAC6-204ENST00000376643 OR52N2Q8NGI0 321 aa13.68□□□□□ -0.22
HDAC6-204ENST00000376643 PTPMT1Q8WUK0 201 aaPredicted RBP13.68□□□□□ -0.22
HDAC6-204ENST00000376643 TANKQ92844 425 aa13.68□□□□□ -0.22
HDAC6-204ENST00000376643 EXT2Q93063 718 aa13.68□□□□□ -0.22
HDAC6-204ENST00000376643 SARAFQ96BY9 339 aa13.68□□□□□ -0.22
HDAC6-204ENST00000376643 SMC6Q96SB8 1091 aa13.68□□□□□ -0.22
HDAC6-204ENST00000376643 TREX2Q9BQ50 279 aaPredicted RBP13.68□□□□□ -0.22
HDAC6-204ENST00000376643 TTTY12Q9BZ98 90 aa13.68□□□□□ -0.22
HDAC6-204ENST00000376643 KCNF1Q9H3M0 494 aa13.68□□□□□ -0.22
HDAC6-204ENST00000376643 TSC22D4Q9Y3Q8 395 aa13.68□□□□□ -0.22
HDAC6-204ENST00000376643 PCDHGA11Q9Y5H2 935 aa13.68□□□□□ -0.22
HDAC6-204ENST00000376643 CACNA1CQ13936 2221 aa13.67□□□□□ -0.22
HDAC6-204ENST00000376643 TGFBR3LH3BV60 316 aa13.67□□□□□ -0.22
HDAC6-204ENST00000376643 SUSD5O60279 629 aa13.67□□□□□ -0.22
HDAC6-204ENST00000376643 UGDHO60701 494 aa13.67□□□□□ -0.22
HDAC6-204ENST00000376643 WDR1O75083 606 aa13.67□□□□□ -0.22
HDAC6-204ENST00000376643 IGHG3P01860 377 aa13.67□□□□□ -0.22
HDAC6-204ENST00000376643 GABRA1P14867 456 aa13.67□□□□□ -0.22
HDAC6-204ENST00000376643 FAM83EQ2M2I3 478 aa13.67□□□□□ -0.22
HDAC6-204ENST00000376643 HYAL4Q2M3T9 481 aa13.67□□□□□ -0.22
HDAC6-204ENST00000376643 WLSQ5T9L3 541 aa13.67□□□□□ -0.22
HDAC6-204ENST00000376643 KHDRBS2Q5VWX1 349 aaKnown RBP13.67□□□□□ -0.22
HDAC6-204ENST00000376643 GRHL2Q6ISB3 625 aa13.67□□□□□ -0.22
HDAC6-204ENST00000376643 METTL2BQ6P1Q9 378 aaKnown RBP13.67□□□□□ -0.22
HDAC6-204ENST00000376643 KLC3Q6P597 504 aa13.67□□□□□ -0.22
HDAC6-204ENST00000376643 CDH24Q86UP0 819 aa13.67□□□□□ -0.22
HDAC6-204ENST00000376643 ZCCHC7Q8N3Z6 543 aaKnown RBP13.67□□□□□ -0.22
HDAC6-204ENST00000376643 SPATA6LQ8N4H0 392 aa13.67□□□□□ -0.22
HDAC6-204ENST00000376643 RGMAQ96B86 450 aa13.67□□□□□ -0.22
HDAC6-204ENST00000376643 DEFB127Q9H1M4 99 aa13.67□□□□□ -0.22
HDAC6-204ENST00000376643 DPH5Q9H2P9 285 aa13.67□□□□□ -0.22
HDAC6-204ENST00000376643 ALG9Q9H6U8 611 aa13.67□□□□□ -0.22
HDAC6-204ENST00000376643 RPF2Q9H7B2 306 aaKnown RBP13.67□□□□□ -0.22
HDAC6-204ENST00000376643 WDR41Q9HAD4 459 aa13.67□□□□□ -0.22
HDAC6-204ENST00000376643 SMYD2Q9NRG4 433 aa13.67□□□□□ -0.22
HDAC6-204ENST00000376643 B4GALT7Q9UBV7 327 aa13.67□□□□□ -0.22
HDAC6-204ENST00000376643 KCNN3Q9UGI6 736 aa13.67□□□□□ -0.22
HDAC6-204ENST00000376643 BOKQ9UMX3 212 aaPredicted RBP13.67□□□□□ -0.22
HDAC6-204ENST00000376643 RNF6Q9Y252 685 aa13.67□□□□□ -0.22
HDAC6-204ENST00000376643 A0A087X1B8 175 aa13.66□□□□□ -0.22
HDAC6-204ENST00000376643 A0A1B0GVC2 190 aa13.66□□□□□ -0.22
HDAC6-204ENST00000376643 TMEM200CA6NKL6 621 aa13.66□□□□□ -0.22
HDAC6-204ENST00000376643 FAM166BA8MTA8 275 aa13.66□□□□□ -0.22
HDAC6-204ENST00000376643 CAPN14A8MX76 684 aa13.66□□□□□ -0.22
HDAC6-204ENST00000376643 NPIPA2E9PIF3 369 aa13.66□□□□□ -0.22
HDAC6-204ENST00000376643 NPIPA3F8WFD2 350 aa13.66□□□□□ -0.22
HDAC6-204ENST00000376643 AQP7O14520 342 aa13.66□□□□□ -0.22
HDAC6-204ENST00000376643 PRKNO60260 465 aaPredicted RBP13.66□□□□□ -0.22
HDAC6-204ENST00000376643 HCN1O60741 890 aa13.66□□□□□ -0.22
HDAC6-204ENST00000376643 LDB3O75112 727 aa13.66□□□□□ -0.22
HDAC6-204ENST00000376643 PDE9AO76083 593 aa13.66□□□□□ -0.22
HDAC6-204ENST00000376643 GLSO94925 669 aaPredicted RBP13.66□□□□□ -0.22
HDAC6-204ENST00000376643 TBX6O95947 436 aaPredicted RBP13.66□□□□□ -0.22
HDAC6-204ENST00000376643 CD22P20273 847 aa13.66□□□□□ -0.22
HDAC6-204ENST00000376643 ACVR2AP27037 513 aa13.66□□□□□ -0.22
HDAC6-204ENST00000376643 IGLV3-21P80748 117 aaPredicted RBP13.66□□□□□ -0.22
HDAC6-204ENST00000376643 SLC10A1Q14973 349 aa13.66□□□□□ -0.22
HDAC6-204ENST00000376643 TBCELQ5QJ74 424 aa13.66□□□□□ -0.22
HDAC6-204ENST00000376643 DEPDC1Q5TB30 811 aa13.66□□□□□ -0.22
HDAC6-204ENST00000376643 LIPJQ5W064 366 aa13.66□□□□□ -0.22
HDAC6-204ENST00000376643 CES4AQ5XG92 561 aa13.66□□□□□ -0.22
HDAC6-204ENST00000376643 SLC22A10Q63ZE4 541 aa13.66□□□□□ -0.22
HDAC6-204ENST00000376643 OR4C11Q6IEV9 310 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms