RNA–Protein interactions for RNA: ENST00000376567.6

DDR1-224, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene DDR1, Length 3,832 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-224ENST00000376567 SLC38A4Q969I6 547 aa11.85□□□□□ -0.51
DDR1-224ENST00000376567 RNFT2Q96EX2 444 aa11.85□□□□□ -0.51
DDR1-224ENST00000376567 HHIPL1Q96JK4 782 aa11.85□□□□□ -0.51
DDR1-224ENST00000376567 HDHD2Q9H0R4 259 aa11.85□□□□□ -0.51
DDR1-224ENST00000376567 OR51I1Q9H343 314 aa11.85□□□□□ -0.51
DDR1-224ENST00000376567 C8orf4Q9NR00 106 aa11.85□□□□□ -0.51
DDR1-224ENST00000376567 MBNL1Q9NR56 388 aaKnown RBP11.85□□□□□ -0.51
DDR1-224ENST00000376567 SNX11Q9Y5W9 270 aa11.85□□□□□ -0.51
DDR1-224ENST00000376567 SCN3AQ9NY46 2000 aa11.85□□□□□ -0.51
DDR1-224ENST00000376567 NPIPA5A0A0B4J1W7 369 aa11.84□□□□□ -0.51
DDR1-224ENST00000376567 NPIPA7E9PJI5 369 aa11.84□□□□□ -0.51
DDR1-224ENST00000376567 NPIPA8P0DM63 369 aa11.84□□□□□ -0.51
DDR1-224ENST00000376567 NR2F6P10588 404 aa11.84□□□□□ -0.51
DDR1-224ENST00000376567 CDK4P11802 303 aa11.84□□□□□ -0.51
DDR1-224ENST00000376567 CERS1P27544 350 aa11.84□□□□□ -0.51
DDR1-224ENST00000376567 CRISP3P54108 245 aa11.84□□□□□ -0.51
DDR1-224ENST00000376567 PRR5P85299 388 aa11.84□□□□□ -0.51
DDR1-224ENST00000376567 NFATC3Q12968 1075 aa11.84□□□□□ -0.51
DDR1-224ENST00000376567 SYPL1Q16563 259 aa11.84□□□□□ -0.51
DDR1-224ENST00000376567 WSCD2Q2TBF2 565 aa11.84□□□□□ -0.51
DDR1-224ENST00000376567 FAM83HQ6ZRV2 1179 aaPredicted RBP11.84□□□□□ -0.51
DDR1-224ENST00000376567 LSRQ86X29 649 aaPredicted RBP11.84□□□□□ -0.51
DDR1-224ENST00000376567 TMC8Q8IU68 726 aa11.84□□□□□ -0.51
DDR1-224ENST00000376567 SPARTQ8N0X7 666 aa11.84□□□□□ -0.51
DDR1-224ENST00000376567 CYP4Z2PQ8N1L4 340 aa11.84□□□□□ -0.51
DDR1-224ENST00000376567 C10orf111Q8N326 155 aa11.84□□□□□ -0.51
DDR1-224ENST00000376567 GATSQ8NAP1 163 aa11.84□□□□□ -0.51
DDR1-224ENST00000376567 FBXO15Q8NCQ5 510 aaPredicted RBP11.84□□□□□ -0.51
DDR1-224ENST00000376567 TEFMQ96QE5 360 aaKnown RBP11.84□□□□□ -0.51
DDR1-224ENST00000376567 SLC17A9Q9BYT1 436 aa11.84□□□□□ -0.51
DDR1-224ENST00000376567 TEX10Q9NXF1 929 aaPredicted RBP11.84□□□□□ -0.51
DDR1-224ENST00000376567 SPIN1Q9Y657 262 aaPredicted RBP11.84□□□□□ -0.51
DDR1-224ENST00000376567 TDRD15B5MCY1 1934 aaKnown RBP11.84□□□□□ -0.51
DDR1-224ENST00000376567 CACNA1EQ15878 2313 aa11.84□□□□□ -0.51
DDR1-224ENST00000376567 GAPDHSO14556 408 aaPredicted RBP11.84□□□□□ -0.51
DDR1-224ENST00000376567 PRMT3O60678 531 aa11.84□□□□□ -0.51
DDR1-224ENST00000376567 HNRNPA1P09651 372 aaKnown RBP eCLIP11.84□□□□□ -0.51
DDR1-224ENST00000376567 NPPBP16860 134 aa11.84□□□□□ -0.51
DDR1-224ENST00000376567 ITPKBP27987 946 aa11.84□□□□□ -0.51
DDR1-224ENST00000376567 MPIP34949 423 aa11.84□□□□□ -0.51
DDR1-224ENST00000376567 PRLHRP49683 370 aa11.84□□□□□ -0.51
DDR1-224ENST00000376567 CDK3Q00526 305 aa11.84□□□□□ -0.51
DDR1-224ENST00000376567 BCDIN3DQ7Z5W3 292 aaKnown RBP11.84□□□□□ -0.51
DDR1-224ENST00000376567 KLHDC8AQ8IYD2 350 aa11.84□□□□□ -0.51
DDR1-224ENST00000376567 CHDHQ8NE62 594 aaPredicted RBP11.84□□□□□ -0.51
DDR1-224ENST00000376567 GAL3ST4Q96RP7 486 aa11.84□□□□□ -0.51
DDR1-224ENST00000376567 CYP8B1Q9UNU6 501 aa11.84□□□□□ -0.51
DDR1-224ENST00000376567 SH2B3Q9UQQ2 575 aa11.84□□□□□ -0.51
DDR1-224ENST00000376567 OR6C74A6NCV1 312 aa11.84□□□□□ -0.51
DDR1-224ENST00000376567 TLR4O00206 839 aa11.84□□□□□ -0.51
DDR1-224ENST00000376567 TSC22D2O75157 780 aa11.84□□□□□ -0.51
DDR1-224ENST00000376567 GTF2E2P29084 291 aaKnown RBP11.84□□□□□ -0.51
DDR1-224ENST00000376567 C9orf50Q5SZB4 431 aa11.84□□□□□ -0.51
DDR1-224ENST00000376567 ALG1LQ6GMV1 187 aa11.84□□□□□ -0.51
DDR1-224ENST00000376567 FIGNL1Q6PIW4 674 aa11.84□□□□□ -0.51
DDR1-224ENST00000376567 FAM43BQ6ZT52 329 aaPredicted RBP11.84□□□□□ -0.51
DDR1-224ENST00000376567 TRIM46Q7Z4K8 759 aa11.84□□□□□ -0.51
DDR1-224ENST00000376567 COX18Q8N8Q8 333 aa11.84□□□□□ -0.51
DDR1-224ENST00000376567 NDNFQ8TB73 568 aa11.84□□□□□ -0.51
DDR1-224ENST00000376567 HDAC2Q92769 488 aaKnown RBP11.84□□□□□ -0.51
DDR1-224ENST00000376567 SAMD11Q96NU1 681 aa11.84□□□□□ -0.51
DDR1-224ENST00000376567 OR4K3Q96R72 315 aa11.84□□□□□ -0.51
DDR1-224ENST00000376567 SPATA5L1Q9BVQ7 753 aa11.84□□□□□ -0.51
DDR1-224ENST00000376567 OSBPL10Q9BXB5 764 aa11.84□□□□□ -0.51
DDR1-224ENST00000376567 ZNF638Q14966 1978 aaKnown RBP11.84□□□□□ -0.51
DDR1-224ENST00000376567 SNTNA6NMZ2 147 aa11.83□□□□□ -0.52
DDR1-224ENST00000376567 SLC16A5O15375 505 aa11.83□□□□□ -0.52
DDR1-224ENST00000376567 KCNK5O95279 499 aa11.83□□□□□ -0.52
DDR1-224ENST00000376567 CNR2P34972 360 aa11.83□□□□□ -0.52
DDR1-224ENST00000376567 RXRGP48443 463 aa11.83□□□□□ -0.52
DDR1-224ENST00000376567 MASP1P48740 699 aa11.83□□□□□ -0.52
DDR1-224ENST00000376567 GRSF1Q12849 480 aaKnown RBP eCLIP11.83□□□□□ -0.521e-5■□□□□ 8.9
DDR1-224ENST00000376567 TMEM240Q5SV17 173 aa11.83□□□□□ -0.52
DDR1-224ENST00000376567 FAAH2Q6GMR7 532 aa11.83□□□□□ -0.52
DDR1-224ENST00000376567 CDC73Q6P1J9 531 aa11.83□□□□□ -0.52
DDR1-224ENST00000376567 B3GLCTQ6Y288 498 aa11.83□□□□□ -0.52
DDR1-224ENST00000376567 SLCO4C1Q6ZQN7 724 aa11.83□□□□□ -0.52
DDR1-224ENST00000376567 SLC15A4Q8N697 577 aa11.83□□□□□ -0.52
DDR1-224ENST00000376567 Q96MT0 163 aa11.83□□□□□ -0.52
DDR1-224ENST00000376567 SLC38A2Q96QD8 506 aa11.83□□□□□ -0.52
DDR1-224ENST00000376567 RPP25Q9BUL9 199 aaKnown RBP11.83□□□□□ -0.52
DDR1-224ENST00000376567 SLC2A11Q9BYW1 496 aa11.83□□□□□ -0.52
DDR1-224ENST00000376567 AMBRA1Q9C0C7 1298 aa11.83□□□□□ -0.52
DDR1-224ENST00000376567 P2RX2Q9UBL9 471 aa11.83□□□□□ -0.52
DDR1-224ENST00000376567 CNOT11Q9UKZ1 510 aaKnown RBP11.83□□□□□ -0.52
DDR1-224ENST00000376567 RWDD3Q9Y3V2 267 aa11.83□□□□□ -0.52
DDR1-224ENST00000376567 DNMT3AQ9Y6K1 912 aaPredicted RBP11.83□□□□□ -0.52
DDR1-224ENST00000376567 H0YAE9 185 aa11.83□□□□□ -0.52
DDR1-224ENST00000376567 CASKO14936 926 aa11.83□□□□□ -0.52
DDR1-224ENST00000376567 ZNF846Q147U1 533 aa11.83□□□□□ -0.52
DDR1-224ENST00000376567 FAM92BQ6ZTR7 304 aa11.83□□□□□ -0.52
DDR1-224ENST00000376567 GPR149Q86SP6 731 aa11.83□□□□□ -0.52
DDR1-224ENST00000376567 LHFPL3Q86UP9 236 aa11.83□□□□□ -0.52
DDR1-224ENST00000376567 ATP6V1C2Q8NEY4 427 aa11.83□□□□□ -0.52
DDR1-224ENST00000376567 RBM18Q96H35 190 aaKnown RBP11.83□□□□□ -0.52
DDR1-224ENST00000376567 BTBD1Q9H0C5 482 aa11.83□□□□□ -0.52
DDR1-224ENST00000376567 HRASLS2Q9NWW9 162 aa11.83□□□□□ -0.52
DDR1-224ENST00000376567 COMMD3Q9UBI1 195 aa11.83□□□□□ -0.52
DDR1-224ENST00000376567 HCN4Q9Y3Q4 1203 aa11.83□□□□□ -0.52
DDR1-224ENST00000376567 CD22P20273 847 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms