RNA–Protein interactions for RNA: ENST00000376259.6

TNFRSF1B-201, Transcript of TNF receptor superfamily member 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF1B, Length 3,683 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1B-201ENST00000376259 LOC101059915A0A1B0GWI6 518 aaPredicted RBP13.73□□□□□ -0.21
TNFRSF1B-201ENST00000376259 OR2A25A4D2G3 310 aa13.73□□□□□ -0.21
TNFRSF1B-201ENST00000376259 HNRNPCL2B2RXH8 293 aa13.73□□□□□ -0.21
TNFRSF1B-201ENST00000376259 TMEM189-UBE2V1I3L0A0 370 aa13.73□□□□□ -0.21
TNFRSF1B-201ENST00000376259 TGM5O43548 720 aa13.73□□□□□ -0.21
TNFRSF1B-201ENST00000376259 GMFGO60234 142 aa13.73□□□□□ -0.21
TNFRSF1B-201ENST00000376259 IDSP22304 550 aa13.73□□□□□ -0.21
TNFRSF1B-201ENST00000376259 VIPR1P32241 457 aa13.73□□□□□ -0.21
TNFRSF1B-201ENST00000376259 DEFB103AP81534 67 aa13.73□□□□□ -0.21
TNFRSF1B-201ENST00000376259 SELENBP1Q13228 472 aa13.73□□□□□ -0.21
TNFRSF1B-201ENST00000376259 SLC8B1Q6J4K2 584 aa13.73□□□□□ -0.21
TNFRSF1B-201ENST00000376259 REEP3Q6NUK4 255 aa13.73□□□□□ -0.21
TNFRSF1B-201ENST00000376259 MTFR2Q6P444 385 aa13.73□□□□□ -0.21
TNFRSF1B-201ENST00000376259 HSDL2Q6YN16 418 aa13.73□□□□□ -0.21
TNFRSF1B-201ENST00000376259 KLHDC8BQ8IXV7 354 aa13.73□□□□□ -0.21
TNFRSF1B-201ENST00000376259 TIGD4Q8IY51 512 aa13.73□□□□□ -0.21
TNFRSF1B-201ENST00000376259 OXR1Q8N573 874 aa13.73□□□□□ -0.21
TNFRSF1B-201ENST00000376259 PIGKQ92643 395 aa13.73□□□□□ -0.21
TNFRSF1B-201ENST00000376259 DNAJA3Q96EY1 480 aa13.73□□□□□ -0.21
TNFRSF1B-201ENST00000376259 TRIM45Q9H8W5 580 aaPredicted RBP13.73□□□□□ -0.21
TNFRSF1B-201ENST00000376259 AKIP1Q9NQ31 210 aa13.73□□□□□ -0.21
TNFRSF1B-201ENST00000376259 CNIH4Q9P003 139 aa13.73□□□□□ -0.21
TNFRSF1B-201ENST00000376259 PCDHGA3Q9Y5H0 932 aa13.73□□□□□ -0.21
TNFRSF1B-201ENST00000376259 IMPA1P29218 277 aa13.73□□□□□ -0.21
TNFRSF1B-201ENST00000376259 HOXA9P31269 272 aa13.73□□□□□ -0.21
TNFRSF1B-201ENST00000376259 HTRA3P83110 453 aa13.73□□□□□ -0.21
TNFRSF1B-201ENST00000376259 CSTF1Q05048 431 aaKnown RBP13.73□□□□□ -0.21
TNFRSF1B-201ENST00000376259 IDNKQ5T6J7 187 aa13.73□□□□□ -0.21
TNFRSF1B-201ENST00000376259 FRMPD2BQ6IN97 320 aa13.73□□□□□ -0.21
TNFRSF1B-201ENST00000376259 ARMCX6Q7L4S7 300 aa13.73□□□□□ -0.21
TNFRSF1B-201ENST00000376259 C6orf120Q7Z4R8 191 aa13.73□□□□□ -0.21
TNFRSF1B-201ENST00000376259 FAM46DQ8NEK8 389 aa13.73□□□□□ -0.21
TNFRSF1B-201ENST00000376259 CXorf40AQ8TE69 158 aa13.73□□□□□ -0.21
TNFRSF1B-201ENST00000376259 SUSD6Q92537 303 aa13.73□□□□□ -0.21
TNFRSF1B-201ENST00000376259 ERVK-11Q9UQG0 969 aa13.73□□□□□ -0.21
TNFRSF1B-201ENST00000376259 SNX11Q9Y5W9 270 aa13.73□□□□□ -0.21
TNFRSF1B-201ENST00000376259 UNC80Q8N2C7 3258 aa13.73□□□□□ -0.21
TNFRSF1B-201ENST00000376259 C2orf92A0A1B0GVN3 265 aa13.72□□□□□ -0.21
TNFRSF1B-201ENST00000376259 K7ESM1 405 aa13.72□□□□□ -0.21
TNFRSF1B-201ENST00000376259 HAT1O14929 419 aa13.72□□□□□ -0.21
TNFRSF1B-201ENST00000376259 SLITRK5O94991 958 aa13.72□□□□□ -0.21
TNFRSF1B-201ENST00000376259 PCMT1P22061 227 aa13.72□□□□□ -0.21
TNFRSF1B-201ENST00000376259 S100A1P23297 94 aa13.72□□□□□ -0.21
TNFRSF1B-201ENST00000376259 NTSP30990 170 aa13.72□□□□□ -0.21
TNFRSF1B-201ENST00000376259 TIE1P35590 1138 aa13.72□□□□□ -0.21
TNFRSF1B-201ENST00000376259 SYPL1Q16563 259 aa13.72□□□□□ -0.21
TNFRSF1B-201ENST00000376259 ZNF791Q3KP31 576 aaPredicted RBP13.72□□□□□ -0.21
TNFRSF1B-201ENST00000376259 ZNF544Q6NX49 715 aa13.72□□□□□ -0.21
TNFRSF1B-201ENST00000376259 PAMR1Q6UXH9 720 aa13.72□□□□□ -0.21
TNFRSF1B-201ENST00000376259 MTSS1LQ765P7 747 aa13.72□□□□□ -0.21
TNFRSF1B-201ENST00000376259 GRASPQ7Z6J2 395 aaPredicted RBP13.72□□□□□ -0.21
TNFRSF1B-201ENST00000376259 C12orf76Q8N812 135 aaPredicted RBP13.72□□□□□ -0.21
TNFRSF1B-201ENST00000376259 TESCQ96BS2 214 aa13.72□□□□□ -0.21
TNFRSF1B-201ENST00000376259 OMA1Q96E52 524 aa13.72□□□□□ -0.21
TNFRSF1B-201ENST00000376259 COQ3Q9NZJ6 369 aa13.72□□□□□ -0.21
TNFRSF1B-201ENST00000376259 ANKMY1Q9P2S6 941 aa13.72□□□□□ -0.21
TNFRSF1B-201ENST00000376259 ENOPH1Q9UHY7 261 aa13.72□□□□□ -0.21
TNFRSF1B-201ENST00000376259 ZNF639Q9UID6 485 aa13.72□□□□□ -0.21
TNFRSF1B-201ENST00000376259 NDRG4Q9ULP0 352 aaKnown RBP13.72□□□□□ -0.21
TNFRSF1B-201ENST00000376259 SPATA2Q9UM82 520 aa13.72□□□□□ -0.21
TNFRSF1B-201ENST00000376259 A0A1W2PQ09 198 aa13.72□□□□□ -0.21
TNFRSF1B-201ENST00000376259 A0A1W2PQL4 384 aaPredicted RBP13.72□□□□□ -0.21
TNFRSF1B-201ENST00000376259 GAPDHSO14556 408 aaPredicted RBP13.72□□□□□ -0.21
TNFRSF1B-201ENST00000376259 DYRK3O43781 588 aa13.72□□□□□ -0.21
TNFRSF1B-201ENST00000376259 PRMT3O60678 531 aa13.72□□□□□ -0.21
TNFRSF1B-201ENST00000376259 RB1P06400 928 aa13.72□□□□□ -0.21
TNFRSF1B-201ENST00000376259 TALDO1P37837 337 aa13.72□□□□□ -0.21
TNFRSF1B-201ENST00000376259 EIF2DP41214 584 aaKnown RBP13.72□□□□□ -0.21
TNFRSF1B-201ENST00000376259 METAP1P53582 386 aa13.72□□□□□ -0.21
TNFRSF1B-201ENST00000376259 RGS8P57771 180 aaPredicted RBP13.72□□□□□ -0.21
TNFRSF1B-201ENST00000376259 CEP78Q5JTW2 689 aa13.72□□□□□ -0.21
TNFRSF1B-201ENST00000376259 PLEKHS1Q5SXH7 462 aa13.72□□□□□ -0.21
TNFRSF1B-201ENST00000376259 ZSCAN2Q7Z7L9 614 aaPredicted RBP13.72□□□□□ -0.21
TNFRSF1B-201ENST00000376259 MARCH9Q86YJ5 346 aa13.72□□□□□ -0.21
TNFRSF1B-201ENST00000376259 CCDC71Q8IV32 467 aaPredicted RBP13.72□□□□□ -0.21
TNFRSF1B-201ENST00000376259 SYT14Q8NB59 555 aa13.72□□□□□ -0.21
TNFRSF1B-201ENST00000376259 PJA1Q8NG27 643 aa13.72□□□□□ -0.21
TNFRSF1B-201ENST00000376259 OR10G6Q8NH81 332 aa13.72□□□□□ -0.21
TNFRSF1B-201ENST00000376259 PUM2Q8TB72 1066 aaKnown RBP eCLIP13.72□□□□□ -0.21
TNFRSF1B-201ENST00000376259 RNF31Q96EP0 1072 aa13.72□□□□□ -0.21
TNFRSF1B-201ENST00000376259 AIF1LQ9BQI0 150 aa13.72□□□□□ -0.21
TNFRSF1B-201ENST00000376259 SLIRPQ9GZT3 109 aaKnown RBP13.72□□□□□ -0.21
TNFRSF1B-201ENST00000376259 TDP1Q9NUW8 608 aa13.72□□□□□ -0.21
TNFRSF1B-201ENST00000376259 MAT2BQ9NZL9 334 aa13.72□□□□□ -0.21
TNFRSF1B-201ENST00000376259 PSORS1C1Q9UIG5 152 aa13.72□□□□□ -0.21
TNFRSF1B-201ENST00000376259 CCL27Q9Y4X3 112 aa13.72□□□□□ -0.21
TNFRSF1B-201ENST00000376259 CD8B2A6NJW9 211 aa13.72□□□□□ -0.21
TNFRSF1B-201ENST00000376259 ERI3O43414 337 aaKnown RBP13.72□□□□□ -0.21
TNFRSF1B-201ENST00000376259 NCR1O76036 304 aa13.72□□□□□ -0.21
TNFRSF1B-201ENST00000376259 ADH1AP07327 375 aa13.72□□□□□ -0.21
TNFRSF1B-201ENST00000376259 ZDHHC11BP0C7U3 371 aa13.72□□□□□ -0.21
TNFRSF1B-201ENST00000376259 C1GALT1C1LP0DN25 315 aa13.72□□□□□ -0.21
TNFRSF1B-201ENST00000376259 CD8BP10966 210 aa13.72□□□□□ -0.21
TNFRSF1B-201ENST00000376259 GPX2P18283 190 aa13.72□□□□□ -0.21
TNFRSF1B-201ENST00000376259 SNAP47Q5SQN1 464 aa13.72□□□□□ -0.21
TNFRSF1B-201ENST00000376259 RAB42Q8N4Z0 105 aa13.72□□□□□ -0.21
TNFRSF1B-201ENST00000376259 TMEM145Q8NBT3 493 aa13.72□□□□□ -0.21
TNFRSF1B-201ENST00000376259 PCNPQ8WW12 178 aaKnown RBP13.72□□□□□ -0.21
TNFRSF1B-201ENST00000376259 TADA1Q96BN2 335 aa13.72□□□□□ -0.21
TNFRSF1B-201ENST00000376259 SLC35G5Q96KT7 338 aa13.72□□□□□ -0.21
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