RNA–Protein interactions for RNA: ENST00000375692.5

CLCNKA-202, Transcript of chloride voltage-gated channel Ka, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CLCNKA, Length 2,581 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-202ENST00000375692 UGDHO60701 494 aa13.46□□□□□ -0.25
CLCNKA-202ENST00000375692 SLC16A8O95907 504 aa13.46□□□□□ -0.25
CLCNKA-202ENST00000375692 HBQ1P09105 142 aa13.46□□□□□ -0.25
CLCNKA-202ENST00000375692 CHI3L1P36222 383 aaPredicted RBP13.46□□□□□ -0.25
CLCNKA-202ENST00000375692 PBX2P40425 430 aa13.46□□□□□ -0.25
CLCNKA-202ENST00000375692 SPINT3P49223 89 aa13.46□□□□□ -0.25
CLCNKA-202ENST00000375692 HMGA2P52926 109 aa13.46□□□□□ -0.25
CLCNKA-202ENST00000375692 PSPHP78330 225 aa13.46□□□□□ -0.25
CLCNKA-202ENST00000375692 SP140Q13342 867 aa13.46□□□□□ -0.25
CLCNKA-202ENST00000375692 PUM1Q14671 1186 aaKnown RBP eCLIP13.46□□□□□ -0.25
CLCNKA-202ENST00000375692 LIPKQ5VXJ0 399 aa13.46□□□□□ -0.25
CLCNKA-202ENST00000375692 USP45Q70EL2 814 aa13.46□□□□□ -0.25
CLCNKA-202ENST00000375692 CAMKMTQ7Z624 323 aa13.46□□□□□ -0.25
CLCNKA-202ENST00000375692 KRT73Q86Y46 540 aa13.46□□□□□ -0.25
CLCNKA-202ENST00000375692 TRIM48Q8IWZ4 208 aa13.46□□□□□ -0.25
CLCNKA-202ENST00000375692 LAS2Q8IYD9 372 aa13.46□□□□□ -0.25
CLCNKA-202ENST00000375692 GPR65Q8IYL9 337 aa13.46□□□□□ -0.25
CLCNKA-202ENST00000375692 TCEAL8Q8IYN2 117 aa13.46□□□□□ -0.25
CLCNKA-202ENST00000375692 TAGAPQ8N103 731 aa13.46□□□□□ -0.25
CLCNKA-202ENST00000375692 MMP21Q8N119 569 aa13.46□□□□□ -0.25
CLCNKA-202ENST00000375692 CELF5Q8N6W0 485 aaKnown RBP13.46□□□□□ -0.25
CLCNKA-202ENST00000375692 FAM46DQ8NEK8 389 aa13.46□□□□□ -0.25
CLCNKA-202ENST00000375692 SETD6Q8TBK2 473 aa13.46□□□□□ -0.25
CLCNKA-202ENST00000375692 SUV39H2Q9H5I1 410 aa13.46□□□□□ -0.25
CLCNKA-202ENST00000375692 ZDHHC6Q9H6R6 413 aa13.46□□□□□ -0.25
CLCNKA-202ENST00000375692 SLC25A19Q9HC21 320 aa13.46□□□□□ -0.25
CLCNKA-202ENST00000375692 ABCB9Q9NP78 766 aa13.46□□□□□ -0.25
CLCNKA-202ENST00000375692 B4GALT6Q9UBX8 382 aa13.46□□□□□ -0.25
CLCNKA-202ENST00000375692 SNX11Q9Y5W9 270 aa13.46□□□□□ -0.25
CLCNKA-202ENST00000375692 ENPP4Q9Y6X5 453 aa13.46□□□□□ -0.25
CLCNKA-202ENST00000375692 HMX3A6NHT5 357 aa13.46□□□□□ -0.26
CLCNKA-202ENST00000375692 CCDC85CA6NKD9 419 aa13.46□□□□□ -0.26
CLCNKA-202ENST00000375692 FADS2P1A8MWK0 482 aa13.46□□□□□ -0.26
CLCNKA-202ENST00000375692 CENPBD1B2RD01 187 aa13.46□□□□□ -0.26
CLCNKA-202ENST00000375692 TLR4O00206 839 aa13.46□□□□□ -0.26
CLCNKA-202ENST00000375692 CDRT1O95170 752 aa13.46□□□□□ -0.26
CLCNKA-202ENST00000375692 GJA1P17302 382 aa13.46□□□□□ -0.26
CLCNKA-202ENST00000375692 SSTR4P31391 388 aa13.46□□□□□ -0.26
CLCNKA-202ENST00000375692 CSTF2P33240 577 aaKnown RBP eCLIP13.46□□□□□ -0.26
CLCNKA-202ENST00000375692 SOAT1P35610 550 aa13.46□□□□□ -0.26
CLCNKA-202ENST00000375692 LIM2P55344 173 aa13.46□□□□□ -0.26
CLCNKA-202ENST00000375692 HYAL2Q12891 473 aa13.46□□□□□ -0.26
CLCNKA-202ENST00000375692 UAP1L1Q3KQV9 507 aa13.46□□□□□ -0.26
CLCNKA-202ENST00000375692 RPS26P11Q5JNZ5 115 aaPredicted RBP13.46□□□□□ -0.26
CLCNKA-202ENST00000375692 ZNF770Q6IQ21 691 aaPredicted RBP13.46□□□□□ -0.26
CLCNKA-202ENST00000375692 FAM131AQ6UXB0 335 aa13.46□□□□□ -0.26
CLCNKA-202ENST00000375692 ARMCX6Q7L4S7 300 aa13.46□□□□□ -0.26
CLCNKA-202ENST00000375692 ZNF438Q7Z4V0 828 aa13.46□□□□□ -0.26
CLCNKA-202ENST00000375692 VN1R5Q7Z5H4 357 aa13.46□□□□□ -0.26
CLCNKA-202ENST00000375692 WDR48Q8TAF3 677 aa13.46□□□□□ -0.26
CLCNKA-202ENST00000375692 NEIL2Q969S2 332 aa13.46□□□□□ -0.26
CLCNKA-202ENST00000375692 C19orf43Q9BQ61 176 aa13.46□□□□□ -0.26
CLCNKA-202ENST00000375692 WRAP53Q9BUR4 548 aaKnown RBP13.46□□□□□ -0.26
CLCNKA-202ENST00000375692 PRRG3Q9BZD7 231 aa13.46□□□□□ -0.26
CLCNKA-202ENST00000375692 REEP4Q9H6H4 257 aa13.46□□□□□ -0.26
CLCNKA-202ENST00000375692 LRRTM2O43300 516 aa13.45□□□□□ -0.26
CLCNKA-202ENST00000375692 TGFB1P01137 390 aa13.45□□□□□ -0.26
CLCNKA-202ENST00000375692 PRKCAP17252 672 aa13.45□□□□□ -0.26
CLCNKA-202ENST00000375692 PSMA1P25786 263 aaKnown RBP13.45□□□□□ -0.26
CLCNKA-202ENST00000375692 MAPK8P45983 427 aa13.45□□□□□ -0.26
CLCNKA-202ENST00000375692 PTPN5P54829 565 aa13.45□□□□□ -0.26
CLCNKA-202ENST00000375692 RPS26P62854 115 aaKnown RBP13.45□□□□□ -0.26
CLCNKA-202ENST00000375692 HOXC5Q00444 222 aa13.45□□□□□ -0.26
CLCNKA-202ENST00000375692 CD83Q01151 205 aa13.45□□□□□ -0.26
CLCNKA-202ENST00000375692 C2orf80Q0P641 193 aa13.45□□□□□ -0.26
CLCNKA-202ENST00000375692 SEC23BQ15437 767 aa13.45□□□□□ -0.26
CLCNKA-202ENST00000375692 LILRA6Q6PI73 481 aa13.45□□□□□ -0.26
CLCNKA-202ENST00000375692 TMPRSS11BQ86T26 416 aa13.45□□□□□ -0.26
CLCNKA-202ENST00000375692 MRPL43Q8N983 215 aaKnown RBP13.45□□□□□ -0.26
CLCNKA-202ENST00000375692 PHOSPHO2Q8TCD6 241 aa13.45□□□□□ -0.26
CLCNKA-202ENST00000375692 ASZ1Q8WWH4 475 aa13.45□□□□□ -0.26
CLCNKA-202ENST00000375692 RNF170Q96K19 258 aa13.45□□□□□ -0.26
CLCNKA-202ENST00000375692 RSPO3Q9BXY4 272 aaPredicted RBP13.45□□□□□ -0.26
CLCNKA-202ENST00000375692 POLR2J2Q9GZM3 115 aaKnown RBP13.45□□□□□ -0.26
CLCNKA-202ENST00000375692 OR51B5Q9H339 312 aa13.45□□□□□ -0.26
CLCNKA-202ENST00000375692 CSNK1DP48730 415 aa13.45□□□□□ -0.26
CLCNKA-202ENST00000375692 RHAGQ02094 409 aa13.45□□□□□ -0.26
CLCNKA-202ENST00000375692 RUNX1T1Q06455 604 aa13.45□□□□□ -0.26
CLCNKA-202ENST00000375692 LARS2Q15031 903 aaKnown RBP13.45□□□□□ -0.26
CLCNKA-202ENST00000375692 CRB2Q5IJ48 1285 aa13.45□□□□□ -0.26
CLCNKA-202ENST00000375692 COMMD6Q7Z4G1 85 aa13.45□□□□□ -0.26
CLCNKA-202ENST00000375692 PHF6Q8IWS0 365 aaKnown RBP eCLIP13.45□□□□□ -0.26
CLCNKA-202ENST00000375692 KLHL6Q8WZ60 621 aa13.45□□□□□ -0.26
CLCNKA-202ENST00000375692 MAGEB10Q96LZ2 347 aaPredicted RBP13.45□□□□□ -0.26
CLCNKA-202ENST00000375692 GDF15Q99988 308 aa13.45□□□□□ -0.26
CLCNKA-202ENST00000375692 BHLHE41Q9C0J9 482 aaPredicted RBP13.45□□□□□ -0.26
CLCNKA-202ENST00000375692 C11orf54Q9H0W9 315 aaPredicted RBP13.45□□□□□ -0.26
CLCNKA-202ENST00000375692 MIXL1Q9H2W2 232 aa13.45□□□□□ -0.26
CLCNKA-202ENST00000375692 BRF2Q9HAW0 419 aa13.45□□□□□ -0.26
CLCNKA-202ENST00000375692 SH2B3Q9UQQ2 575 aa13.45□□□□□ -0.26
CLCNKA-202ENST00000375692 CMAHPQ9Y471 501 aa13.45□□□□□ -0.26
CLCNKA-202ENST00000375692 AP1M2Q9Y6Q5 423 aa13.45□□□□□ -0.26
CLCNKA-202ENST00000375692 HELZP42694 1942 aaKnown RBP13.45□□□□□ -0.26
CLCNKA-202ENST00000375692 A0A0B4J293 547 aa13.44□□□□□ -0.26
CLCNKA-202ENST00000375692 A8MVJ9 347 aa13.44□□□□□ -0.26
CLCNKA-202ENST00000375692 ZNF670-ZNF695F2Z2N8 137 aa13.44□□□□□ -0.26
CLCNKA-202ENST00000375692 H3BN98 237 aa13.44□□□□□ -0.26
CLCNKA-202ENST00000375692 KPNA5O15131 536 aa13.44□□□□□ -0.26
CLCNKA-202ENST00000375692 IFNW1P05000 195 aa13.44□□□□□ -0.26
CLCNKA-202ENST00000375692 RHCEP18577 417 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms