RNA–Protein interactions for RNA: ENST00000375661.5

LSM2-208, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM2, Length 876 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-208ENST00000375661 LIPJQ5W064 366 aa11.4□□□□□ -0.58
LSM2-208ENST00000375661 FAM219BQ5XKK7 198 aa11.4□□□□□ -0.58
LSM2-208ENST00000375661 ADNP2Q6IQ32 1131 aa11.4□□□□□ -0.58
LSM2-208ENST00000375661 GRHL2Q6ISB3 625 aa11.4□□□□□ -0.58
LSM2-208ENST00000375661 TMIGD1Q6UXZ0 262 aa11.4□□□□□ -0.58
LSM2-208ENST00000375661 ASPGQ86U10 573 aa11.4□□□□□ -0.58
LSM2-208ENST00000375661 LAS2Q8IYD9 372 aa11.4□□□□□ -0.58
LSM2-208ENST00000375661 LGI4Q8N135 537 aa11.4□□□□□ -0.58
LSM2-208ENST00000375661 BEST3Q8N1M1 668 aa11.4□□□□□ -0.58
LSM2-208ENST00000375661 KRT78Q8N1N4 520 aa11.4□□□□□ -0.58
LSM2-208ENST00000375661 HORMAD2Q8N7B1 307 aa11.4□□□□□ -0.58
LSM2-208ENST00000375661 CCNYL1Q8N7R7 359 aa11.4□□□□□ -0.58
LSM2-208ENST00000375661 OR6Y1Q8NGX8 325 aa11.4□□□□□ -0.58
LSM2-208ENST00000375661 CREB3L4Q8TEY5 395 aa11.4□□□□□ -0.58
LSM2-208ENST00000375661 SLC13A3Q8WWT9 602 aa11.4□□□□□ -0.58
LSM2-208ENST00000375661 PKNOX2Q96KN3 472 aa11.4□□□□□ -0.58
LSM2-208ENST00000375661 CDK15Q96Q40 435 aa11.4□□□□□ -0.58
LSM2-208ENST00000375661 PITHD1Q9GZP4 211 aaPredicted RBP11.4□□□□□ -0.58
LSM2-208ENST00000375661 ZFP69BQ9UJL9 534 aa11.4□□□□□ -0.58
LSM2-208ENST00000375661 A8MUI8 341 aa11.39□□□□□ -0.59
LSM2-208ENST00000375661 E9PLN8 166 aa11.39□□□□□ -0.59
LSM2-208ENST00000375661 FAM227AF5H4B4 570 aa11.39□□□□□ -0.59
LSM2-208ENST00000375661 UBFD1O14562 309 aaKnown RBP11.39□□□□□ -0.59
LSM2-208ENST00000375661 CLDN9O95484 217 aa11.39□□□□□ -0.59
LSM2-208ENST00000375661 AHRP35869 848 aa11.39□□□□□ -0.59
LSM2-208ENST00000375661 HNF4AP41235 474 aa11.39□□□□□ -0.59
LSM2-208ENST00000375661 CCNG1P51959 295 aa11.39□□□□□ -0.59
LSM2-208ENST00000375661 WDR4P57081 412 aaKnown RBP11.39□□□□□ -0.59
LSM2-208ENST00000375661 KRTAP10-9P60411 292 aa11.39□□□□□ -0.59
LSM2-208ENST00000375661 SRSF11Q05519 484 aaKnown RBP11.39□□□□□ -0.59
LSM2-208ENST00000375661 HYAL2Q12891 473 aa11.39□□□□□ -0.59
LSM2-208ENST00000375661 TUBA3CQ13748 450 aa11.39□□□□□ -0.59
LSM2-208ENST00000375661 CDSNQ15517 529 aa11.39□□□□□ -0.59
LSM2-208ENST00000375661 OR1C1Q15619 314 aa11.39□□□□□ -0.59
LSM2-208ENST00000375661 BTBD16Q32M84 506 aa11.39□□□□□ -0.59
LSM2-208ENST00000375661 PAGE2BQ5JRK9 111 aa11.39□□□□□ -0.59
LSM2-208ENST00000375661 TUBA3EQ6PEY2 450 aa11.39□□□□□ -0.59
LSM2-208ENST00000375661 FRMD7Q6ZUT3 714 aa11.39□□□□□ -0.59
LSM2-208ENST00000375661 MILR1Q7Z6M3 343 aa11.39□□□□□ -0.59
LSM2-208ENST00000375661 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP11.39□□□□□ -0.59
LSM2-208ENST00000375661 GHDCQ8N2G8 530 aa11.39□□□□□ -0.59
LSM2-208ENST00000375661 ANKRD42Q8N9B4 389 aa11.39□□□□□ -0.59
LSM2-208ENST00000375661 OR4F6Q8NGB9 312 aa11.39□□□□□ -0.59
LSM2-208ENST00000375661 M1APQ8TC57 530 aa11.39□□□□□ -0.59
LSM2-208ENST00000375661 NT5CQ8TCD5 201 aa11.39□□□□□ -0.59
LSM2-208ENST00000375661 ATP6V1E2Q96A05 226 aa11.39□□□□□ -0.59
LSM2-208ENST00000375661 FRMD6Q96NE9 622 aa11.39□□□□□ -0.59
LSM2-208ENST00000375661 VKORC1Q9BQB6 163 aa11.39□□□□□ -0.59
LSM2-208ENST00000375661 UTP23Q9BRU9 249 aaKnown RBP11.39□□□□□ -0.59
LSM2-208ENST00000375661 VN1R1Q9GZP7 353 aa11.39□□□□□ -0.59
LSM2-208ENST00000375661 AICDAQ9GZX7 198 aa11.39□□□□□ -0.59
LSM2-208ENST00000375661 RHBGQ9H310 441 aa11.39□□□□□ -0.59
LSM2-208ENST00000375661 KCNK13Q9HB14 408 aa11.39□□□□□ -0.59
LSM2-208ENST00000375661 WDR91A4D1P6 747 aa11.38□□□□□ -0.59
LSM2-208ENST00000375661 NPIPA5E9PKD4 350 aa11.38□□□□□ -0.59
LSM2-208ENST00000375661 H0YIV9 168 aa11.38□□□□□ -0.59
LSM2-208ENST00000375661 NDUFS4O43181 175 aa11.38□□□□□ -0.59
LSM2-208ENST00000375661 ASNA1O43681 348 aa11.38□□□□□ -0.59
LSM2-208ENST00000375661 WISP2O76076 250 aa11.38□□□□□ -0.59
LSM2-208ENST00000375661 SEC24DO94855 1032 aaPredicted RBP11.38□□□□□ -0.59
LSM2-208ENST00000375661 OR4F21O95013 312 aa11.38□□□□□ -0.59
LSM2-208ENST00000375661 NSA2O95478 260 aaKnown RBP11.38□□□□□ -0.59
LSM2-208ENST00000375661 OTCP00480 354 aa11.38□□□□□ -0.59
LSM2-208ENST00000375661 ABOP16442 354 aa11.38□□□□□ -0.59
LSM2-208ENST00000375661 ARRB2P32121 409 aa11.38□□□□□ -0.59
LSM2-208ENST00000375661 CD96P40200 585 aa11.38□□□□□ -0.59
LSM2-208ENST00000375661 EFNA3P52797 238 aa11.38□□□□□ -0.59
LSM2-208ENST00000375661 LCP2Q13094 533 aa11.38□□□□□ -0.59
LSM2-208ENST00000375661 PWP1Q13610 501 aa11.38□□□□□ -0.59
LSM2-208ENST00000375661 CPSF6Q16630 551 aaKnown RBP eCLIP11.38□□□□□ -0.59
LSM2-208ENST00000375661 HIST2H2ACQ16777 129 aaPredicted RBP11.38□□□□□ -0.59
LSM2-208ENST00000375661 SYT16Q17RD7 645 aa11.38□□□□□ -0.59
LSM2-208ENST00000375661 GGTA1PQ4G0N0 100 aa11.38□□□□□ -0.59
LSM2-208ENST00000375661 CES4AQ5XG92 561 aa11.38□□□□□ -0.59
LSM2-208ENST00000375661 HIST2H2AA3Q6FI13 130 aa11.38□□□□□ -0.59
LSM2-208ENST00000375661 TMEM214Q6NUQ4 689 aaKnown RBP11.38□□□□□ -0.59
LSM2-208ENST00000375661 LETMD1Q6P1Q0 360 aa11.38□□□□□ -0.59
LSM2-208ENST00000375661 MED27Q6P2C8 311 aa11.38□□□□□ -0.59
LSM2-208ENST00000375661 ZCCHC23Q6ZST2 131 aa11.38□□□□□ -0.59
LSM2-208ENST00000375661 MYLK4Q86YV6 388 aaPredicted RBP11.38□□□□□ -0.59
LSM2-208ENST00000375661 SIAH3Q8IW03 269 aa11.38□□□□□ -0.59
LSM2-208ENST00000375661 TBC1D19Q8N5T2 526 aa11.38□□□□□ -0.59
LSM2-208ENST00000375661 SLC5A8Q8N695 610 aa11.38□□□□□ -0.59
LSM2-208ENST00000375661 KCT2Q8NC54 265 aa11.38□□□□□ -0.59
LSM2-208ENST00000375661 CAMKVQ8NCB2 501 aa11.38□□□□□ -0.59
LSM2-208ENST00000375661 OR7G3Q8NG95 312 aa11.38□□□□□ -0.59
LSM2-208ENST00000375661 AGAP11Q8TF27 550 aa11.38□□□□□ -0.59
LSM2-208ENST00000375661 ZNF473Q8WTR7 871 aaKnown RBP11.38□□□□□ -0.59
LSM2-208ENST00000375661 UBE2E3Q969T4 207 aa11.38□□□□□ -0.59
LSM2-208ENST00000375661 SIGLEC12Q96PQ1 595 aa11.38□□□□□ -0.59
LSM2-208ENST00000375661 DMRTA2Q96SC8 542 aa11.38□□□□□ -0.59
LSM2-208ENST00000375661 ZNF382Q96SR6 550 aa11.38□□□□□ -0.59
LSM2-208ENST00000375661 SLC6A16Q9GZN6 736 aa11.38□□□□□ -0.59
LSM2-208ENST00000375661 KLHL31Q9H511 634 aa11.38□□□□□ -0.59
LSM2-208ENST00000375661 MMP25Q9NPA2 562 aa11.38□□□□□ -0.59
LSM2-208ENST00000375661 COQ3Q9NZJ6 369 aa11.38□□□□□ -0.59
LSM2-208ENST00000375661 NPIPA1Q9UND3 350 aa11.38□□□□□ -0.59
LSM2-208ENST00000375661 SCN3AQ9NY46 2000 aa11.38□□□□□ -0.59
LSM2-208ENST00000375661 TACC2O95359 2948 aa11.38□□□□□ -0.59
LSM2-208ENST00000375661 SETD2Q9BYW2 2564 aaPredicted RBP11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms