RNA–Protein interactions for RNA: ENST00000374876.4

CCDC40-202, Transcript of coiled-coil domain containing 40, humanhuman

TSL 1 (best) BASIC

Gene CCDC40, Length 2,010 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-202ENST00000374876 PHEXP78562 749 aa14.8□□□□□ -0.04
CCDC40-202ENST00000374876 MEF2AQ02078 507 aaPredicted RBP14.8□□□□□ -0.04
CCDC40-202ENST00000374876 RAPSNQ13702 412 aa14.8□□□□□ -0.04
CCDC40-202ENST00000374876 KDM4DQ6B0I6 523 aa14.8□□□□□ -0.04
CCDC40-202ENST00000374876 XKR5Q6UX68 686 aa14.8□□□□□ -0.04
CCDC40-202ENST00000374876 PIWIL3Q7Z3Z3 882 aaKnown RBP14.8□□□□□ -0.04
CCDC40-202ENST00000374876 ARHGAP22Q7Z5H3 698 aa14.8□□□□□ -0.04
CCDC40-202ENST00000374876 PARGQ86W56 976 aa14.8□□□□□ -0.04
CCDC40-202ENST00000374876 GATAD2AQ86YP4 633 aa14.8□□□□□ -0.04
CCDC40-202ENST00000374876 LRRC56Q8IYG6 542 aaPredicted RBP14.8□□□□□ -0.04
CCDC40-202ENST00000374876 C11orf65Q8NCR3 313 aa14.8□□□□□ -0.04
CCDC40-202ENST00000374876 BPIFB6Q8NFQ5 453 aa14.8□□□□□ -0.04
CCDC40-202ENST00000374876 OR4K1Q8NGD4 311 aa14.8□□□□□ -0.04
CCDC40-202ENST00000374876 MAL2Q969L2 176 aa14.8□□□□□ -0.04
CCDC40-202ENST00000374876 THAP11Q96EK4 314 aa14.8□□□□□ -0.04
CCDC40-202ENST00000374876 LHPPQ9H008 270 aa14.8□□□□□ -0.04
CCDC40-202ENST00000374876 OR51B5Q9H339 312 aa14.8□□□□□ -0.04
CCDC40-202ENST00000374876 TRIT1Q9H3H1 467 aaKnown RBP14.8□□□□□ -0.04
CCDC40-202ENST00000374876 ERVMER34-1Q9H9K5 563 aa14.8□□□□□ -0.04
CCDC40-202ENST00000374876 PHPT1Q9NRX4 125 aaPredicted RBP14.8□□□□□ -0.04
CCDC40-202ENST00000374876 TM7SF3Q9NS93 570 aa14.8□□□□□ -0.04
CCDC40-202ENST00000374876 EXO1Q9UQ84 846 aaKnown RBP14.8□□□□□ -0.04
CCDC40-202ENST00000374876 ASF1AQ9Y294 204 aa14.8□□□□□ -0.04
CCDC40-202ENST00000374876 ASCC3Q8N3C0 2202 aaKnown RBP14.79□□□□□ -0.04
CCDC40-202ENST00000374876 NUP214P35658 2090 aaPredicted RBP14.79□□□□□ -0.04
CCDC40-202ENST00000374876 A0A1B0GTQ1 180 aa14.79□□□□□ -0.04
CCDC40-202ENST00000374876 A0A1W2PPW3 197 aa14.79□□□□□ -0.04
CCDC40-202ENST00000374876 PTGES3LE9PB15 166 aa14.79□□□□□ -0.04
CCDC40-202ENST00000374876 FUCA1P04066 466 aa14.79□□□□□ -0.04
CCDC40-202ENST00000374876 CYP4B1P13584 511 aa14.79□□□□□ -0.04
CCDC40-202ENST00000374876 ACADLP28330 430 aa14.79□□□□□ -0.04
CCDC40-202ENST00000374876 RPL3P39023 403 aaKnown RBP14.79□□□□□ -0.04
CCDC40-202ENST00000374876 ITGA1P56199 1179 aa14.79□□□□□ -0.04
CCDC40-202ENST00000374876 ZNF385BQ569K4 471 aa14.79□□□□□ -0.04
CCDC40-202ENST00000374876 LAIR2Q6ISS4 152 aa14.79□□□□□ -0.04
CCDC40-202ENST00000374876 UNC5DQ6UXZ4 953 aa14.79□□□□□ -0.04
CCDC40-202ENST00000374876 ADAMTSL4Q6UY14 1074 aa14.79□□□□□ -0.04
CCDC40-202ENST00000374876 NAGSQ8N159 534 aa14.79□□□□□ -0.04
CCDC40-202ENST00000374876 UBE2E3Q969T4 207 aa14.79□□□□□ -0.04
CCDC40-202ENST00000374876 PPCDCQ96CD2 204 aa14.79□□□□□ -0.04
CCDC40-202ENST00000374876 WDR92Q96MX6 357 aa14.79□□□□□ -0.04
CCDC40-202ENST00000374876 FGF22Q9HCT0 170 aa14.79□□□□□ -0.04
CCDC40-202ENST00000374876 DNAAF2Q9NVR5 837 aaKnown RBP14.79□□□□□ -0.04
CCDC40-202ENST00000374876 SPASTQ9UBP0 616 aa14.79□□□□□ -0.04
CCDC40-202ENST00000374876 AP1M2Q9Y6Q5 423 aa14.79□□□□□ -0.04
CCDC40-202ENST00000374876 CSF2P04141 144 aa14.78□□□□□ -0.04
CCDC40-202ENST00000374876 HTR1AP08908 422 aa14.78□□□□□ -0.04
CCDC40-202ENST00000374876 CCDC159P0C7I6 412 aa14.78□□□□□ -0.04
CCDC40-202ENST00000374876 CCNA2P20248 432 aa14.78□□□□□ -0.04
CCDC40-202ENST00000374876 STT3AP46977 705 aa14.78□□□□□ -0.04
CCDC40-202ENST00000374876 ARRB1P49407 418 aaPredicted RBP14.78□□□□□ -0.04
CCDC40-202ENST00000374876 KIAA1024LP59773 190 aa14.78□□□□□ -0.04
CCDC40-202ENST00000374876 HBA1P69905 142 aa14.78□□□□□ -0.04
CCDC40-202ENST00000374876 PIGFQ07326 219 aa14.78□□□□□ -0.04
CCDC40-202ENST00000374876 C2orf80Q0P641 193 aa14.78□□□□□ -0.04
CCDC40-202ENST00000374876 CDK5R2Q13319 367 aa14.78□□□□□ -0.04
CCDC40-202ENST00000374876 KEAP1Q14145 624 aa14.78□□□□□ -0.04
CCDC40-202ENST00000374876 FGD3Q5JSP0 725 aa14.78□□□□□ -0.04
CCDC40-202ENST00000374876 PRAMEF13Q5VWM6 474 aa14.78□□□□□ -0.04
CCDC40-202ENST00000374876 ATG16L2Q8NAA4 619 aa14.78□□□□□ -0.04
CCDC40-202ENST00000374876 WDR48Q8TAF3 677 aa14.78□□□□□ -0.04
CCDC40-202ENST00000374876 PUM2Q8TB72 1066 aaKnown RBP eCLIP14.78□□□□□ -0.04
CCDC40-202ENST00000374876 CNIH3Q8TBE1 160 aa14.78□□□□□ -0.04
CCDC40-202ENST00000374876 C16orf78Q8WTQ4 265 aa14.78□□□□□ -0.04
CCDC40-202ENST00000374876 SETD7Q8WTS6 366 aaKnown RBP14.78□□□□□ -0.04
CCDC40-202ENST00000374876 OR1E3Q8WZA6 343 aa14.78□□□□□ -0.04
CCDC40-202ENST00000374876 NODALQ96S42 347 aa14.78□□□□□ -0.04
CCDC40-202ENST00000374876 PRKAB1Q9Y478 270 aa14.78□□□□□ -0.04
CCDC40-202ENST00000374876 TMX2-CTNND1H3BSU7 103 aa14.78□□□□□ -0.04
CCDC40-202ENST00000374876 JRKO75564 520 aa14.78□□□□□ -0.04
CCDC40-202ENST00000374876 ANGPTL1O95841 491 aa14.78□□□□□ -0.04
CCDC40-202ENST00000374876 C6orf47O95873 294 aa14.78□□□□□ -0.04
CCDC40-202ENST00000374876 CEACAM5P06731 702 aa14.78□□□□□ -0.04
CCDC40-202ENST00000374876 KLK1P06870 262 aa14.78□□□□□ -0.04
CCDC40-202ENST00000374876 HOXC4P09017 264 aaPredicted RBP14.78□□□□□ -0.04
CCDC40-202ENST00000374876 FURINP09958 794 aa14.78□□□□□ -0.04
CCDC40-202ENST00000374876 JUNDP17535 347 aa14.78□□□□□ -0.04
CCDC40-202ENST00000374876 TEAD1P28347 426 aa14.78□□□□□ -0.04
CCDC40-202ENST00000374876 PIK3CBP42338 1070 aa14.78□□□□□ -0.04
CCDC40-202ENST00000374876 MAPK10P53779 464 aa14.78□□□□□ -0.04
CCDC40-202ENST00000374876 TAS2R50P59544 299 aa14.78□□□□□ -0.04
CCDC40-202ENST00000374876 SRP54P61011 504 aaKnown RBP14.78□□□□□ -0.04
CCDC40-202ENST00000374876 C1orf61Q13536 156 aa14.78□□□□□ -0.04
CCDC40-202ENST00000374876 ALG11Q2TAA5 492 aa14.78□□□□□ -0.04
CCDC40-202ENST00000374876 FAM83HQ6ZRV2 1179 aaPredicted RBP14.78□□□□□ -0.04
CCDC40-202ENST00000374876 GOT1L1Q8NHS2 421 aaPredicted RBP14.78□□□□□ -0.04
CCDC40-202ENST00000374876 RAB2BQ8WUD1 216 aa14.78□□□□□ -0.04
CCDC40-202ENST00000374876 FBLIM1Q8WUP2 373 aa14.78□□□□□ -0.04
CCDC40-202ENST00000374876 RAD51AP1Q96B01 352 aa14.78□□□□□ -0.04
CCDC40-202ENST00000374876 PDXPQ96GD0 296 aa14.78□□□□□ -0.04
CCDC40-202ENST00000374876 COX14Q96I36 57 aa14.78□□□□□ -0.04
CCDC40-202ENST00000374876 IL17FQ96PD4 163 aa14.78□□□□□ -0.04
CCDC40-202ENST00000374876 APOL4Q9BPW4 351 aa14.78□□□□□ -0.04
CCDC40-202ENST00000374876 SLC35A5Q9BS91 424 aa14.78□□□□□ -0.04
CCDC40-202ENST00000374876 DOHHQ9BU89 302 aa14.78□□□□□ -0.04
CCDC40-202ENST00000374876 CCDC90BQ9GZT6 254 aa14.78□□□□□ -0.04
CCDC40-202ENST00000374876 OR52A5Q9H2C5 316 aa14.78□□□□□ -0.04
CCDC40-202ENST00000374876 SPNS1Q9H2V7 528 aa14.78□□□□□ -0.04
CCDC40-202ENST00000374876 RUBCNLQ9H714 662 aa14.78□□□□□ -0.04
CCDC40-202ENST00000374876 MYNNQ9NPC7 610 aa14.78□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms