RNA–Protein interactions for RNA: ENST00000374747.9

NPLOC4-202, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 2 BASIC

Gene NPLOC4, Length 5,538 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-202ENST00000374747 CD47Q08722 323 aa11.81□□□□□ -0.52
NPLOC4-202ENST00000374747 SLC10A2Q12908 348 aaPredicted RBP11.81□□□□□ -0.52
NPLOC4-202ENST00000374747 AIMP2Q13155 320 aaKnown RBP11.81□□□□□ -0.52
NPLOC4-202ENST00000374747 RPS27LQ71UM5 84 aaKnown RBP11.81□□□□□ -0.52
NPLOC4-202ENST00000374747 PSD4Q8NDX1 1056 aa11.81□□□□□ -0.52
NPLOC4-202ENST00000374747 RNF11Q9Y3C5 154 aa11.81□□□□□ -0.52
NPLOC4-202ENST00000374747 OR2B3O76000 313 aa11.81□□□□□ -0.52
NPLOC4-202ENST00000374747 CLDN7O95471 211 aa11.81□□□□□ -0.52
NPLOC4-202ENST00000374747 NDUFS1P28331 727 aa11.81□□□□□ -0.52
NPLOC4-202ENST00000374747 CD40LGP29965 261 aa11.81□□□□□ -0.52
NPLOC4-202ENST00000374747 TAS2R50P59544 299 aa11.81□□□□□ -0.52
NPLOC4-202ENST00000374747 RPP38P78345 283 aaKnown RBP11.81□□□□□ -0.52
NPLOC4-202ENST00000374747 ATXN7L3Q14CW9 347 aaPredicted RBP11.81□□□□□ -0.52
NPLOC4-202ENST00000374747 TRAM2Q15035 370 aa11.81□□□□□ -0.52
NPLOC4-202ENST00000374747 PCBP2Q15366 365 aaKnown RBP eCLIP11.81□□□□□ -0.525e-7■■■■■ 29.1
NPLOC4-202ENST00000374747 PTCHD3Q3KNS1 767 aa11.81□□□□□ -0.52
NPLOC4-202ENST00000374747 SPIN3Q5JUX0 258 aa11.81□□□□□ -0.52
NPLOC4-202ENST00000374747 TMEM130Q8N3G9 435 aa11.81□□□□□ -0.52
NPLOC4-202ENST00000374747 NEIL3Q8TAT5 605 aa11.81□□□□□ -0.52
NPLOC4-202ENST00000374747 SMG9Q9H0W8 520 aaKnown RBP11.81□□□□□ -0.52
NPLOC4-202ENST00000374747 TMEM184CQ9NVA4 438 aa11.81□□□□□ -0.52
NPLOC4-202ENST00000374747 NLE1Q9NVX2 485 aaPredicted RBP11.81□□□□□ -0.52
NPLOC4-202ENST00000374747 GIMAP2Q9UG22 337 aa11.81□□□□□ -0.52
NPLOC4-202ENST00000374747 C6orf47O95873 294 aa11.8□□□□□ -0.52
NPLOC4-202ENST00000374747 MAP2K4P45985 399 aa11.8□□□□□ -0.52
NPLOC4-202ENST00000374747 C2orf27AQ580R0 203 aa11.8□□□□□ -0.52
NPLOC4-202ENST00000374747 ATG9BQ674R7 924 aa11.8□□□□□ -0.52
NPLOC4-202ENST00000374747 LRRC66Q68CR7 880 aa11.8□□□□□ -0.52
NPLOC4-202ENST00000374747 RAB11FIP2Q7L804 512 aa11.8□□□□□ -0.52
NPLOC4-202ENST00000374747 RBM12BQ8IXT5 1001 aaKnown RBP11.8□□□□□ -0.52
NPLOC4-202ENST00000374747 LNX2Q8N448 690 aa11.8□□□□□ -0.52
NPLOC4-202ENST00000374747 KLHDC9Q8NEP7 349 aa11.8□□□□□ -0.52
NPLOC4-202ENST00000374747 RPLP0P6Q8NHW5 317 aa11.8□□□□□ -0.52
NPLOC4-202ENST00000374747 GNPDA2Q8TDQ7 276 aa11.8□□□□□ -0.52
NPLOC4-202ENST00000374747 CASTOR1Q8WTX7 329 aa11.8□□□□□ -0.52
NPLOC4-202ENST00000374747 SMPDL3BQ92485 455 aa11.8□□□□□ -0.52
NPLOC4-202ENST00000374747 TCEAL4Q96EI5 215 aa11.8□□□□□ -0.52
NPLOC4-202ENST00000374747 CPNE2Q96FN4 548 aaPredicted RBP11.8□□□□□ -0.52
NPLOC4-202ENST00000374747 SFXN1Q9H9B4 322 aa11.8□□□□□ -0.52
NPLOC4-202ENST00000374747 SPHK2Q9NRA0 654 aa11.8□□□□□ -0.52
NPLOC4-202ENST00000374747 C14orf119Q9NWQ9 140 aa11.8□□□□□ -0.52
NPLOC4-202ENST00000374747 TAC3Q9UHF0 121 aa11.8□□□□□ -0.52
NPLOC4-202ENST00000374747 SCAMP1O15126 338 aa11.8□□□□□ -0.52
NPLOC4-202ENST00000374747 HLCSP50747 726 aa11.8□□□□□ -0.52
NPLOC4-202ENST00000374747 OLIG2Q13516 323 aa11.8□□□□□ -0.52
NPLOC4-202ENST00000374747 GID4Q8IVV7 300 aa11.8□□□□□ -0.52
NPLOC4-202ENST00000374747 PM20D2Q8IYS1 436 aa11.8□□□□□ -0.52
NPLOC4-202ENST00000374747 ZNF565Q8N9K5 539 aa11.8□□□□□ -0.52
NPLOC4-202ENST00000374747 TXNDC5Q8NBS9 432 aaKnown RBP11.8□□□□□ -0.52
NPLOC4-202ENST00000374747 SMPDL3AQ92484 453 aa11.8□□□□□ -0.52
NPLOC4-202ENST00000374747 SGIP1Q9BQI5 828 aa11.8□□□□□ -0.52
NPLOC4-202ENST00000374747 CD244Q9BZW8 370 aa11.8□□□□□ -0.52
NPLOC4-202ENST00000374747 WDR26Q9H7D7 661 aa11.8□□□□□ -0.52
NPLOC4-202ENST00000374747 PAQR5Q9NXK6 330 aaPredicted RBP11.8□□□□□ -0.52
NPLOC4-202ENST00000374747 GSKIPQ9P0R6 139 aa11.8□□□□□ -0.52
NPLOC4-202ENST00000374747 MAFKO60675 156 aa11.8□□□□□ -0.52
NPLOC4-202ENST00000374747 IL3P08700 152 aa11.8□□□□□ -0.52
NPLOC4-202ENST00000374747 NR2C1P13056 603 aa11.8□□□□□ -0.52
NPLOC4-202ENST00000374747 HTR1EP28566 365 aa11.8□□□□□ -0.52
NPLOC4-202ENST00000374747 GLP1RP43220 463 aa11.8□□□□□ -0.52
NPLOC4-202ENST00000374747 HTRA3P83110 453 aa11.8□□□□□ -0.52
NPLOC4-202ENST00000374747 LSAMPQ13449 338 aa11.8□□□□□ -0.52
NPLOC4-202ENST00000374747 TRAM1Q15629 374 aa11.8□□□□□ -0.52
NPLOC4-202ENST00000374747 PUS10Q3MIT2 529 aaKnown RBP11.8□□□□□ -0.52
NPLOC4-202ENST00000374747 ANKRD13BQ86YJ7 626 aa11.8□□□□□ -0.52
NPLOC4-202ENST00000374747 RELTQ969Z4 430 aa11.8□□□□□ -0.52
NPLOC4-202ENST00000374747 LGALS12Q96DT0 336 aa11.8□□□□□ -0.52
NPLOC4-202ENST00000374747 NSUN3Q9H649 340 aaKnown RBP11.8□□□□□ -0.52
NPLOC4-202ENST00000374747 RHCGQ9UBD6 479 aa11.8□□□□□ -0.52
NPLOC4-202ENST00000374747 CLCA3PQ9Y6N3 262 aa11.8□□□□□ -0.52
NPLOC4-202ENST00000374747 MYOCOSA0A1B0GUC4 107 aa11.8□□□□□ -0.52
NPLOC4-202ENST00000374747 KLHL33A6NCF5 533 aa11.8□□□□□ -0.52
NPLOC4-202ENST00000374747 MTX2O75431 263 aa11.8□□□□□ -0.52
NPLOC4-202ENST00000374747 DNASE1P24855 282 aa11.8□□□□□ -0.52
NPLOC4-202ENST00000374747 MAT2AP31153 395 aaKnown RBP11.8□□□□□ -0.52
NPLOC4-202ENST00000374747 GRHL2Q6ISB3 625 aa11.8□□□□□ -0.52
NPLOC4-202ENST00000374747 RNF130Q86XS8 419 aa11.8□□□□□ -0.52
NPLOC4-202ENST00000374747 TICAM1Q8IUC6 712 aa11.8□□□□□ -0.52
NPLOC4-202ENST00000374747 Q8N402 240 aa11.8□□□□□ -0.52
NPLOC4-202ENST00000374747 CAMKVQ8NCB2 501 aa11.8□□□□□ -0.52
NPLOC4-202ENST00000374747 DGAT2Q96PD7 388 aa11.8□□□□□ -0.52
NPLOC4-202ENST00000374747 KCNH6Q9H252 994 aa11.8□□□□□ -0.52
NPLOC4-202ENST00000374747 ERVK-18Q9QC07 812 aa11.8□□□□□ -0.52
NPLOC4-202ENST00000374747 PSAT1Q9Y617 370 aa11.8□□□□□ -0.52
NPLOC4-202ENST00000374747 DENRO43583 198 aaKnown RBP11.79□□□□□ -0.52
NPLOC4-202ENST00000374747 OAS1P00973 400 aaKnown RBP11.79□□□□□ -0.52
NPLOC4-202ENST00000374747 ITGA5P08648 1049 aa11.79□□□□□ -0.52
NPLOC4-202ENST00000374747 ACP5P13686 325 aa11.79□□□□□ -0.52
NPLOC4-202ENST00000374747 HTR2AP28223 471 aa11.79□□□□□ -0.52
NPLOC4-202ENST00000374747 UGT2B10P36537 528 aa11.79□□□□□ -0.52
NPLOC4-202ENST00000374747 BDKRB1P46663 353 aa11.79□□□□□ -0.52
NPLOC4-202ENST00000374747 STT3AP46977 705 aa11.79□□□□□ -0.52
NPLOC4-202ENST00000374747 CD97P48960 835 aa11.79□□□□□ -0.52
NPLOC4-202ENST00000374747 CTBP2P56545 445 aa11.79□□□□□ -0.52
NPLOC4-202ENST00000374747 CGB2Q6NT52 195 aa11.79□□□□□ -0.52
NPLOC4-202ENST00000374747 ALKAL1Q6UXT8 129 aa11.79□□□□□ -0.52
NPLOC4-202ENST00000374747 IGDCC3Q8IVU1 814 aa11.79□□□□□ -0.52
NPLOC4-202ENST00000374747 TCEAL8Q8IYN2 117 aa11.79□□□□□ -0.52
NPLOC4-202ENST00000374747 PLD6Q8N2A8 252 aaKnown RBP11.79□□□□□ -0.52
NPLOC4-202ENST00000374747 C7orf57Q8NEG2 295 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms