RNA–Protein interactions for RNA: ENST00000374429.6

CXCL12-203, Transcript of C-X-C motif chemokine ligand 12, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CXCL12, Length 3,532 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-203ENST00000374429 SIMC1Q8NDZ2 872 aa10.3□□□□□ -0.76
CXCL12-203ENST00000374429 NPLQ9BXD5 320 aaPredicted RBP10.3□□□□□ -0.76
CXCL12-203ENST00000374429 SLC17A9Q9BYT1 436 aa10.3□□□□□ -0.76
CXCL12-203ENST00000374429 RNF167Q9H6Y7 350 aa10.3□□□□□ -0.76
CXCL12-203ENST00000374429 ZNF696Q9H7X3 374 aa10.3□□□□□ -0.76
CXCL12-203ENST00000374429 MRPS30Q9NP92 439 aaKnown RBP10.3□□□□□ -0.76
CXCL12-203ENST00000374429 ADAP2Q9NPF8 381 aa10.3□□□□□ -0.76
CXCL12-203ENST00000374429 PHPT1Q9NRX4 125 aaPredicted RBP10.3□□□□□ -0.76
CXCL12-203ENST00000374429 SAGE1Q9NXZ1 904 aa10.3□□□□□ -0.76
CXCL12-203ENST00000374429 SCN3BQ9NY72 215 aa10.3□□□□□ -0.76
CXCL12-203ENST00000374429 ST14Q9Y5Y6 855 aa10.3□□□□□ -0.76
CXCL12-203ENST00000374429 CLDN24A6NM45 220 aa10.3□□□□□ -0.76
CXCL12-203ENST00000374429 PLPP1O14494 284 aa10.3□□□□□ -0.76
CXCL12-203ENST00000374429 RGS5O15539 181 aa10.3□□□□□ -0.76
CXCL12-203ENST00000374429 SPINT1O43278 529 aa10.3□□□□□ -0.76
CXCL12-203ENST00000374429 RNGTTO60942 597 aaKnown RBP10.3□□□□□ -0.76
CXCL12-203ENST00000374429 SDC3O75056 442 aa10.3□□□□□ -0.76
CXCL12-203ENST00000374429 CCNDBP1O95273 360 aa10.3□□□□□ -0.76
CXCL12-203ENST00000374429 DRD3P35462 400 aa10.3□□□□□ -0.76
CXCL12-203ENST00000374429 LTB4RQ15722 352 aa10.3□□□□□ -0.76
CXCL12-203ENST00000374429 ANKRD54Q6NXT1 300 aa10.3□□□□□ -0.76
CXCL12-203ENST00000374429 PUM2Q8TB72 1066 aaKnown RBP eCLIP10.3□□□□□ -0.76
CXCL12-203ENST00000374429 NIPSNAP1Q9BPW8 284 aa10.3□□□□□ -0.76
CXCL12-203ENST00000374429 EPB41L1Q9H4G0 881 aa10.3□□□□□ -0.76
CXCL12-203ENST00000374429 CXorf36Q9H7Y0 433 aa10.3□□□□□ -0.76
CXCL12-203ENST00000374429 ZNF304Q9HCX3 659 aa10.3□□□□□ -0.76
CXCL12-203ENST00000374429 GPR83Q9NYM4 423 aa10.3□□□□□ -0.76
CXCL12-203ENST00000374429 MSRAQ9UJ68 235 aa10.3□□□□□ -0.76
CXCL12-203ENST00000374429 MKLN1Q9UL63 735 aa10.3□□□□□ -0.76
CXCL12-203ENST00000374429 SDK2Q58EX2 2172 aa10.3□□□□□ -0.76
CXCL12-203ENST00000374429 UPK1AO00322 258 aa10.29□□□□□ -0.76
CXCL12-203ENST00000374429 UBL4AP11441 157 aa10.29□□□□□ -0.76
CXCL12-203ENST00000374429 ATP6V1E1P36543 226 aa10.29□□□□□ -0.76
CXCL12-203ENST00000374429 WNT3P56703 355 aa10.29□□□□□ -0.76
CXCL12-203ENST00000374429 C21orf59P57076 290 aa10.29□□□□□ -0.76
CXCL12-203ENST00000374429 SLAMF1Q13291 335 aa10.29□□□□□ -0.76
CXCL12-203ENST00000374429 FGL2Q14314 439 aa10.29□□□□□ -0.76
CXCL12-203ENST00000374429 GPR19Q15760 415 aa10.29□□□□□ -0.76
CXCL12-203ENST00000374429 CCNJQ5T5M9 372 aa10.29□□□□□ -0.76
CXCL12-203ENST00000374429 INTS11Q5TA45 600 aaKnown RBP10.29□□□□□ -0.76
CXCL12-203ENST00000374429 GRHL2Q6ISB3 625 aa10.29□□□□□ -0.76
CXCL12-203ENST00000374429 ADCK1Q86TW2 530 aa10.29□□□□□ -0.76
CXCL12-203ENST00000374429 ZZZ3Q8IYH5 903 aa10.29□□□□□ -0.76
CXCL12-203ENST00000374429 GPR65Q8IYL9 337 aa10.29□□□□□ -0.76
CXCL12-203ENST00000374429 UBE2J2Q8N2K1 259 aa10.29□□□□□ -0.76
CXCL12-203ENST00000374429 FBXL6Q8N531 539 aa10.29□□□□□ -0.76
CXCL12-203ENST00000374429 L3MBTL4Q8NA19 623 aa10.29□□□□□ -0.76
CXCL12-203ENST00000374429 WDR20Q8TBZ3 569 aa10.29□□□□□ -0.76
CXCL12-203ENST00000374429 DNAJC27Q9NZQ0 273 aa10.29□□□□□ -0.76
CXCL12-203ENST00000374429 CYP8B1Q9UNU6 501 aa10.29□□□□□ -0.76
CXCL12-203ENST00000374429 TMPRSS11DO60235 418 aa10.29□□□□□ -0.76
CXCL12-203ENST00000374429 GUCY1B2O75343 617 aa10.29□□□□□ -0.76
CXCL12-203ENST00000374429 EGFP01133 1207 aa10.29□□□□□ -0.76
CXCL12-203ENST00000374429 HNRNPA1P09651 372 aaKnown RBP eCLIP10.29□□□□□ -0.76
CXCL12-203ENST00000374429 MPC1LP0DKB6 136 aa10.29□□□□□ -0.76
CXCL12-203ENST00000374429 KELP23276 732 aa10.29□□□□□ -0.76
CXCL12-203ENST00000374429 TRIM16LQ309B1 348 aa10.29□□□□□ -0.76
CXCL12-203ENST00000374429 ITPRIPL2Q3MIP1 535 aa10.29□□□□□ -0.76
CXCL12-203ENST00000374429 SMARCD3Q6STE5 483 aa10.29□□□□□ -0.76
CXCL12-203ENST00000374429 MTSS1LQ765P7 747 aa10.29□□□□□ -0.76
CXCL12-203ENST00000374429 PTOV1Q86YD1 416 aa10.29□□□□□ -0.76
CXCL12-203ENST00000374429 AQP11Q8NBQ7 271 aa10.29□□□□□ -0.76
CXCL12-203ENST00000374429 OR10G2Q8NGC3 310 aa10.29□□□□□ -0.76
CXCL12-203ENST00000374429 OR5K1Q8NHB7 308 aa10.29□□□□□ -0.76
CXCL12-203ENST00000374429 RPLP0P6Q8NHW5 317 aa10.29□□□□□ -0.76
CXCL12-203ENST00000374429 HM13Q8TCT9 377 aa10.29□□□□□ -0.76
CXCL12-203ENST00000374429 VMP1Q96GC9 406 aa10.29□□□□□ -0.76
CXCL12-203ENST00000374429 CHCHD6Q9BRQ6 235 aa10.29□□□□□ -0.76
CXCL12-203ENST00000374429 RPS6KA6Q9UK32 745 aa10.29□□□□□ -0.76
CXCL12-203ENST00000374429 CEP250Q9BV73 2442 aa10.29□□□□□ -0.76
CXCL12-203ENST00000374429 KCNE1BA0A087WTH5 132 aa10.29□□□□□ -0.76
CXCL12-203ENST00000374429 LRRC72A6NJI9 287 aa10.29□□□□□ -0.76
CXCL12-203ENST00000374429 CACNB4O00305 520 aaPredicted RBP10.29□□□□□ -0.76
CXCL12-203ENST00000374429 MT-ND2P03891 347 aa10.29□□□□□ -0.76
CXCL12-203ENST00000374429 MYF6P23409 242 aa10.29□□□□□ -0.76
CXCL12-203ENST00000374429 DDX6P26196 483 aaKnown RBP eCLIP10.29□□□□□ -0.76
CXCL12-203ENST00000374429 CCT3P49368 545 aaKnown RBP10.29□□□□□ -0.76
CXCL12-203ENST00000374429 UBE3AQ05086 875 aa10.29□□□□□ -0.76
CXCL12-203ENST00000374429 ERV3-1Q14264 604 aa10.29□□□□□ -0.76
CXCL12-203ENST00000374429 NDUFAF5Q5TEU4 345 aa10.29□□□□□ -0.76
CXCL12-203ENST00000374429 CPZQ66K79 652 aa10.29□□□□□ -0.76
CXCL12-203ENST00000374429 PHF6Q8IWS0 365 aaKnown RBP eCLIP10.29□□□□□ -0.76
CXCL12-203ENST00000374429 ZCCHC7Q8N3Z6 543 aaKnown RBP10.29□□□□□ -0.76
CXCL12-203ENST00000374429 ESX1Q8N693 406 aa10.29□□□□□ -0.76
CXCL12-203ENST00000374429 HORMAD2Q8N7B1 307 aa10.29□□□□□ -0.76
CXCL12-203ENST00000374429 FAM83CQ9BQN1 747 aa10.29□□□□□ -0.76
CXCL12-203ENST00000374429 SACM1LQ9NTJ5 587 aa10.29□□□□□ -0.76
CXCL12-203ENST00000374429 TAS2R9Q9NYW1 312 aa10.29□□□□□ -0.76
CXCL12-203ENST00000374429 NTNG1Q9Y2I2 539 aa10.29□□□□□ -0.76
CXCL12-203ENST00000374429 GPR52Q9Y2T5 361 aa10.29□□□□□ -0.76
CXCL12-203ENST00000374429 LYVE1Q9Y5Y7 322 aa10.29□□□□□ -0.76
CXCL12-203ENST00000374429 AGAP14A8MT82 685 aa10.28□□□□□ -0.76
CXCL12-203ENST00000374429 ZW10O43264 779 aa10.28□□□□□ -0.76
CXCL12-203ENST00000374429 LDB3O75112 727 aa10.28□□□□□ -0.76
CXCL12-203ENST00000374429 GADD45GO95257 159 aa10.28□□□□□ -0.76
CXCL12-203ENST00000374429 CCNA2P20248 432 aa10.28□□□□□ -0.76
CXCL12-203ENST00000374429 CCR8P51685 355 aa10.28□□□□□ -0.76
CXCL12-203ENST00000374429 TAS2R38P59533 333 aa10.28□□□□□ -0.76
CXCL12-203ENST00000374429 TARDBPQ13148 414 aaKnown RBP eCLIP10.28□□□□□ -0.76
CXCL12-203ENST00000374429 KCNJ8Q15842 424 aa10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms