RNA–Protein interactions for RNA: ENST00000373492.6

PBX3-205, Transcript of PBX homeobox 3, humanhuman

TSL 1 (best)

Gene PBX3, Length 950 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX3-205ENST00000373492 RPL14P50914 215 aaKnown RBP17.23■□□□□ 0.35
PBX3-205ENST00000373492 BTG2P78543 158 aa17.23■□□□□ 0.35
PBX3-205ENST00000373492 TNFRSF17Q02223 184 aa17.23■□□□□ 0.35
PBX3-205ENST00000373492 MRM1Q6IN84 353 aaKnown RBP17.23■□□□□ 0.35
PBX3-205ENST00000373492 KIRREL2Q6UWL6 708 aa17.23■□□□□ 0.35
PBX3-205ENST00000373492 ATG14Q6ZNE5 492 aa17.23■□□□□ 0.35
PBX3-205ENST00000373492 ZNF781Q8N8C0 355 aa17.23■□□□□ 0.35
PBX3-205ENST00000373492 CLEC1AQ8NC01 280 aa17.23■□□□□ 0.35
PBX3-205ENST00000373492 C7orf57Q8NEG2 295 aa17.23■□□□□ 0.35
PBX3-205ENST00000373492 OR11G2Q8NGC1 345 aa17.23■□□□□ 0.35
PBX3-205ENST00000373492 METTL2AQ96IZ6 378 aaKnown RBP17.23■□□□□ 0.35
PBX3-205ENST00000373492 SLC25A23Q9BV35 468 aa17.23■□□□□ 0.35
PBX3-205ENST00000373492 C20orf27Q9GZN8 174 aa17.23■□□□□ 0.35
PBX3-205ENST00000373492 MED4Q9NPJ6 270 aa17.23■□□□□ 0.35
PBX3-205ENST00000373492 ZNF71Q9NQZ8 489 aaPredicted RBP17.23■□□□□ 0.35
PBX3-205ENST00000373492 INTS9Q9NV88 658 aaKnown RBP17.23■□□□□ 0.35
PBX3-205ENST00000373492 MCM8Q9UJA3 840 aa17.23■□□□□ 0.35
PBX3-205ENST00000373492 FBXL4Q9UKA2 621 aa17.23■□□□□ 0.35
PBX3-205ENST00000373492 ASB4Q9Y574 426 aa17.23■□□□□ 0.35
PBX3-205ENST00000373492 LOC102723996A0A087X1L8 192 aa17.22■□□□□ 0.35
PBX3-205ENST00000373492 GNG14A0A1W2PPG7 69 aa17.22■□□□□ 0.35
PBX3-205ENST00000373492 OR2W5A6NFC9 320 aa17.22■□□□□ 0.35
PBX3-205ENST00000373492 DYNC1I1O14576 645 aa17.22■□□□□ 0.35
PBX3-205ENST00000373492 KLF11O14901 512 aa17.22■□□□□ 0.35
PBX3-205ENST00000373492 PROM1O43490 865 aa17.22■□□□□ 0.35
PBX3-205ENST00000373492 PCDH7O60245 1069 aa17.22■□□□□ 0.35
PBX3-205ENST00000373492 SEC22BO75396 215 aa17.22■□□□□ 0.35
PBX3-205ENST00000373492 SKAP2O75563 359 aaPredicted RBP17.22■□□□□ 0.35
PBX3-205ENST00000373492 MAOAP21397 527 aa17.22■□□□□ 0.35
PBX3-205ENST00000373492 PRPH2P23942 346 aa17.22■□□□□ 0.35
PBX3-205ENST00000373492 PPP2R1BP30154 601 aa17.22■□□□□ 0.35
PBX3-205ENST00000373492 TRA2BP62995 288 aaKnown RBP17.22■□□□□ 0.35
PBX3-205ENST00000373492 EEF1A2Q05639 463 aaKnown RBP17.22■□□□□ 0.35
PBX3-205ENST00000373492 NR6A1Q15406 480 aa17.22■□□□□ 0.35
PBX3-205ENST00000373492 UGT3A2Q3SY77 523 aa17.22■□□□□ 0.35
PBX3-205ENST00000373492 LANCL3Q6ZV70 420 aa17.22■□□□□ 0.35
PBX3-205ENST00000373492 CPEB2Q7Z5Q1 589 aaKnown RBP17.22■□□□□ 0.35
PBX3-205ENST00000373492 ANKRD37Q7Z713 158 aa17.22■□□□□ 0.35
PBX3-205ENST00000373492 C8orf44Q96CB5 159 aa17.22■□□□□ 0.35
PBX3-205ENST00000373492 APIPQ96GX9 242 aa17.22■□□□□ 0.35
PBX3-205ENST00000373492 SORT1Q99523 831 aa17.22■□□□□ 0.35
PBX3-205ENST00000373492 TUBB1Q9H4B7 451 aa17.22■□□□□ 0.35
PBX3-205ENST00000373492 RPF2Q9H7B2 306 aaKnown RBP17.22■□□□□ 0.35
PBX3-205ENST00000373492 ZNF395Q9H8N7 513 aaPredicted RBP17.22■□□□□ 0.35
PBX3-205ENST00000373492 ATP13A2Q9NQ11 1180 aa17.22■□□□□ 0.35
PBX3-205ENST00000373492 TP53TG5Q9Y2B4 290 aa17.22■□□□□ 0.35
PBX3-205ENST00000373492 ATG4BQ9Y4P1 393 aa17.22■□□□□ 0.35
PBX3-205ENST00000373492 PCDHGB7Q9Y5F8 929 aa17.22■□□□□ 0.35
PBX3-205ENST00000373492 HEMK1Q9Y5R4 338 aaPredicted RBP17.22■□□□□ 0.35
PBX3-205ENST00000373492 NSG1A0A0A6YYJ2 146 aa17.21■□□□□ 0.35
PBX3-205ENST00000373492 PIP5K1BO14986 540 aa17.21■□□□□ 0.35
PBX3-205ENST00000373492 KLHL41O60662 606 aa17.21■□□□□ 0.35
PBX3-205ENST00000373492 CTNSO60931 367 aa17.21■□□□□ 0.35
PBX3-205ENST00000373492 HPP00738 406 aa17.21■□□□□ 0.35
PBX3-205ENST00000373492 NR2F6P10588 404 aa17.21■□□□□ 0.35
PBX3-205ENST00000373492 TIA1P31483 386 aaKnown RBP eCLIP17.21■□□□□ 0.35
PBX3-205ENST00000373492 PGDP52209 483 aa17.21■□□□□ 0.35
PBX3-205ENST00000373492 HNRNPFP52597 415 aaKnown RBP17.21■□□□□ 0.35
PBX3-205ENST00000373492 EFNA3P52797 238 aa17.21■□□□□ 0.35
PBX3-205ENST00000373492 SOX8P57073 446 aa17.21■□□□□ 0.35
PBX3-205ENST00000373492 OR4D2P58180 307 aa17.21■□□□□ 0.35
PBX3-205ENST00000373492 ACTN3Q08043 901 aaPredicted RBP17.21■□□□□ 0.35
PBX3-205ENST00000373492 STX4Q12846 297 aa17.21■□□□□ 0.35
PBX3-205ENST00000373492 AIMP2Q13155 320 aaKnown RBP17.21■□□□□ 0.35
PBX3-205ENST00000373492 C18orf63Q68DL7 685 aa17.21■□□□□ 0.35
PBX3-205ENST00000373492 ASB18Q6ZVZ8 466 aa17.21■□□□□ 0.35
PBX3-205ENST00000373492 NDUFAF7Q7L592 441 aa17.21■□□□□ 0.35
PBX3-205ENST00000373492 ZNF605Q86T29 641 aa17.21■□□□□ 0.35
PBX3-205ENST00000373492 SCUBE1Q8IWY4 988 aa17.21■□□□□ 0.35
PBX3-205ENST00000373492 ARFGAP2Q8N6H7 521 aa17.21■□□□□ 0.35
PBX3-205ENST00000373492 TMEM52Q8NDY8 209 aa17.21■□□□□ 0.35
PBX3-205ENST00000373492 FAM76AQ8TAV0 307 aa17.21■□□□□ 0.35
PBX3-205ENST00000373492 LRRC8CQ8TDW0 803 aa17.21■□□□□ 0.35
PBX3-205ENST00000373492 ZNF75CPQ92670 426 aaPredicted RBP17.21■□□□□ 0.35
PBX3-205ENST00000373492 TANKQ92844 425 aa17.21■□□□□ 0.35
PBX3-205ENST00000373492 TSLPQ969D9 159 aa17.21■□□□□ 0.35
PBX3-205ENST00000373492 LRTM1Q9HBL6 345 aa17.21■□□□□ 0.35
PBX3-205ENST00000373492 NECTIN3Q9NQS3 549 aa17.21■□□□□ 0.35
PBX3-205ENST00000373492 RIC8BQ9NVN3 520 aa17.21■□□□□ 0.35
PBX3-205ENST00000373492 C1orf109Q9NX04 203 aa17.21■□□□□ 0.35
PBX3-205ENST00000373492 SIRT5Q9NXA8 310 aa17.21■□□□□ 0.35
PBX3-205ENST00000373492 HAO1Q9UJM8 370 aa17.21■□□□□ 0.35
PBX3-205ENST00000373492 PTGDR2Q9Y5Y4 395 aa17.21■□□□□ 0.35
PBX3-205ENST00000373492 IGHV1-45A0A0A0MS14 117 aa17.2■□□□□ 0.34
PBX3-205ENST00000373492 A0A1W2PQ72 361 aa17.2■□□□□ 0.34
PBX3-205ENST00000373492 TCRBV16S1A1N1A0A5B0 115 aa17.2■□□□□ 0.34
PBX3-205ENST00000373492 NPIPB8E9PQR5 432 aa17.2■□□□□ 0.34
PBX3-205ENST00000373492 SNNO75324 88 aaPredicted RBP17.2■□□□□ 0.34
PBX3-205ENST00000373492 COX6A1P12074 109 aa17.2■□□□□ 0.34
PBX3-205ENST00000373492 GSTM5P46439 218 aa17.2■□□□□ 0.34
PBX3-205ENST00000373492 BIKQ13323 160 aa17.2■□□□□ 0.34
PBX3-205ENST00000373492 SFT2D3Q587I9 215 aa17.2■□□□□ 0.34
PBX3-205ENST00000373492 GALNT18Q6P9A2 607 aa17.2■□□□□ 0.34
PBX3-205ENST00000373492 Q6ZSR9 355 aa17.2■□□□□ 0.34
PBX3-205ENST00000373492 CLNKQ7Z7G1 428 aa17.2■□□□□ 0.34
PBX3-205ENST00000373492 HPS6Q86YV9 775 aa17.2■□□□□ 0.34
PBX3-205ENST00000373492 GALNT16Q8N428 558 aa17.2■□□□□ 0.34
PBX3-205ENST00000373492 FDCSPQ8NFU4 85 aa17.2■□□□□ 0.34
PBX3-205ENST00000373492 PPP3R2Q96LZ3 170 aa17.2■□□□□ 0.34
PBX3-205ENST00000373492 LPAR4Q99677 370 aa17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms