RNA–Protein interactions for RNA: ENST00000373010.5

USP49-202, Transcript of ubiquitin specific peptidase 49, humanhuman

TSL 5 BASIC

Gene USP49, Length 2,446 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-202ENST00000373010 C17orf62Q9BQA9 187 aa17.8■□□□□ 0.44
USP49-202ENST00000373010 ACOT13Q9NPJ3 140 aa17.8■□□□□ 0.44
USP49-202ENST00000373010 FAM32AQ9Y421 112 aaKnown RBP17.8■□□□□ 0.44
USP49-202ENST00000373010 GPSM3Q9Y4H4 160 aa17.8■□□□□ 0.44
USP49-202ENST00000373010 ENPP4Q9Y6X5 453 aa17.8■□□□□ 0.44
USP49-202ENST00000373010 GPR89AB7ZAQ6 455 aa17.8■□□□□ 0.44
USP49-202ENST00000373010 C5orf58C9J3I9 102 aa17.8■□□□□ 0.44
USP49-202ENST00000373010 K7EQS6 105 aa17.8■□□□□ 0.44
USP49-202ENST00000373010 GPR89BP0CG08 455 aa17.8■□□□□ 0.44
USP49-202ENST00000373010 ALDH4A1P30038 563 aa17.8■□□□□ 0.44
USP49-202ENST00000373010 SERPINB1P30740 379 aa17.8■□□□□ 0.44
USP49-202ENST00000373010 RAB28P51157 221 aa17.8■□□□□ 0.44
USP49-202ENST00000373010 LSM3P62310 102 aaKnown RBP17.8■□□□□ 0.44
USP49-202ENST00000373010 PUM1Q14671 1186 aaKnown RBP eCLIP17.8■□□□□ 0.44
USP49-202ENST00000373010 MOGQ16653 247 aa17.8■□□□□ 0.44
USP49-202ENST00000373010 ZNF776Q68DI1 518 aaPredicted RBP17.8■□□□□ 0.44
USP49-202ENST00000373010 CROCCP3Q8IVE0 287 aa17.8■□□□□ 0.44
USP49-202ENST00000373010 RAB42Q8N4Z0 105 aa17.8■□□□□ 0.44
USP49-202ENST00000373010 TMEM19Q96HH6 336 aa17.8■□□□□ 0.44
USP49-202ENST00000373010 C1QTNF2Q9BXJ5 285 aa17.8■□□□□ 0.44
USP49-202ENST00000373010 BTBD1Q9H0C5 482 aa17.8■□□□□ 0.44
USP49-202ENST00000373010 KLHL31Q9H511 634 aa17.8■□□□□ 0.44
USP49-202ENST00000373010 AMBNQ9NP70 447 aa17.8■□□□□ 0.44
USP49-202ENST00000373010 CCNB1IP1Q9NPC3 277 aa17.8■□□□□ 0.44
USP49-202ENST00000373010 POFUT2Q9Y2G5 429 aa17.8■□□□□ 0.44
USP49-202ENST00000373010 WBP11Q9Y2W2 641 aaKnown RBP17.8■□□□□ 0.44
USP49-202ENST00000373010 XIRP2A4UGR9 3374 aa17.8■□□□□ 0.44
USP49-202ENST00000373010 PRKRAO75569 313 aaKnown RBP17.79■□□□□ 0.44
USP49-202ENST00000373010 CLPXO76031 633 aa17.79■□□□□ 0.44
USP49-202ENST00000373010 IGFALSP35858 605 aa17.79■□□□□ 0.44
USP49-202ENST00000373010 SLC19A1P41440 591 aa17.79■□□□□ 0.44
USP49-202ENST00000373010 IDH2P48735 452 aaKnown RBP17.79■□□□□ 0.44
USP49-202ENST00000373010 RPS21P63220 83 aaKnown RBP17.79■□□□□ 0.44
USP49-202ENST00000373010 KRT33BQ14525 404 aa17.79■□□□□ 0.44
USP49-202ENST00000373010 OR4C11Q6IEV9 310 aa17.79■□□□□ 0.44
USP49-202ENST00000373010 ZNF793Q6ZN11 406 aa17.79■□□□□ 0.44
USP49-202ENST00000373010 NUDT18Q6ZVK8 323 aa17.79■□□□□ 0.44
USP49-202ENST00000373010 PRSS48Q7RTY5 328 aa17.79■□□□□ 0.44
USP49-202ENST00000373010 ZNF605Q86T29 641 aa17.79■□□□□ 0.44
USP49-202ENST00000373010 P3H2Q8IVL5 708 aa17.79■□□□□ 0.44
USP49-202ENST00000373010 CCDC103Q8IW40 242 aa17.79■□□□□ 0.44
USP49-202ENST00000373010 GTPBP3Q969Y2 492 aaKnown RBP17.79■□□□□ 0.44
USP49-202ENST00000373010 YIPF6Q96EC8 236 aa17.79■□□□□ 0.44
USP49-202ENST00000373010 ANKRD33BA6NCL7 494 aa17.79■□□□□ 0.44
USP49-202ENST00000373010 PDZK1P1A8MUH7 402 aa17.79■□□□□ 0.44
USP49-202ENST00000373010 M0R129 80 aa17.79■□□□□ 0.44
USP49-202ENST00000373010 MAGEB3O15480 346 aa17.79■□□□□ 0.44
USP49-202ENST00000373010 GADD45GO95257 159 aa17.79■□□□□ 0.44
USP49-202ENST00000373010 LCKP06239 509 aa17.79■□□□□ 0.44
USP49-202ENST00000373010 TEAD1P28347 426 aa17.79■□□□□ 0.44
USP49-202ENST00000373010 PKLRP30613 574 aa17.79■□□□□ 0.44
USP49-202ENST00000373010 BCL6P41182 706 aa17.79■□□□□ 0.44
USP49-202ENST00000373010 SSR2P43308 183 aa17.79■□□□□ 0.44
USP49-202ENST00000373010 KIR2DL1P43626 348 aaPredicted RBP17.79■□□□□ 0.44
USP49-202ENST00000373010 LIMS1P48059 325 aa17.79■□□□□ 0.44
USP49-202ENST00000373010 TMED1Q13445 227 aa17.79■□□□□ 0.44
USP49-202ENST00000373010 TP53BP2Q13625 1128 aa17.79■□□□□ 0.44
USP49-202ENST00000373010 MAPK11Q15759 364 aa17.79■□□□□ 0.44
USP49-202ENST00000373010 ZNF829Q3KNS6 432 aaPredicted RBP17.79■□□□□ 0.44
USP49-202ENST00000373010 SYT6Q5T7P8 510 aaPredicted RBP17.79■□□□□ 0.44
USP49-202ENST00000373010 SVOPQ8N4V2 548 aa17.79■□□□□ 0.44
USP49-202ENST00000373010 JPH3Q8WXH2 748 aaPredicted RBP17.79■□□□□ 0.44
USP49-202ENST00000373010 TIMM29Q9BSF4 260 aa17.79■□□□□ 0.44
USP49-202ENST00000373010 DPH7Q9BTV6 452 aa17.79■□□□□ 0.44
USP49-202ENST00000373010 SLC17A9Q9BYT1 436 aa17.79■□□□□ 0.44
USP49-202ENST00000373010 DDX31Q9H8H2 851 aaKnown RBP17.79■□□□□ 0.44
USP49-202ENST00000373010 A4GALTQ9NPC4 353 aa17.79■□□□□ 0.44
USP49-202ENST00000373010 PRDM8Q9NQV8 689 aa17.79■□□□□ 0.44
USP49-202ENST00000373010 RNGTTO60942 597 aaKnown RBP17.78■□□□□ 0.44
USP49-202ENST00000373010 GABARAPO95166 117 aa17.78■□□□□ 0.44
USP49-202ENST00000373010 IFNW1P05000 195 aa17.78■□□□□ 0.44
USP49-202ENST00000373010 TFPTP0C1Z6 253 aa17.78■□□□□ 0.44
USP49-202ENST00000373010 PTGER1P34995 402 aa17.78■□□□□ 0.44
USP49-202ENST00000373010 FRKP42685 505 aaPredicted RBP17.78■□□□□ 0.44
USP49-202ENST00000373010 LIM2P55344 173 aa17.78■□□□□ 0.44
USP49-202ENST00000373010 TCEA2Q15560 299 aa17.78■□□□□ 0.44
USP49-202ENST00000373010 SLC30A8Q8IWU4 369 aa17.78■□□□□ 0.44
USP49-202ENST00000373010 GPR32P1Q8NGA4 272 aa17.78■□□□□ 0.44
USP49-202ENST00000373010 OR52E1Q8NGJ3 308 aa17.78■□□□□ 0.44
USP49-202ENST00000373010 UTP15Q8TED0 518 aaKnown RBP17.78■□□□□ 0.44
USP49-202ENST00000373010 IPCEF1Q8WWN9 437 aaPredicted RBP17.78■□□□□ 0.44
USP49-202ENST00000373010 BORCS5Q969J3 196 aa17.78■□□□□ 0.44
USP49-202ENST00000373010 SIGLEC11Q96RL6 698 aa17.78■□□□□ 0.44
USP49-202ENST00000373010 PITHD1Q9GZP4 211 aaPredicted RBP17.78■□□□□ 0.44
USP49-202ENST00000373010 NKX2-4Q9H2Z4 354 aa17.78■□□□□ 0.44
USP49-202ENST00000373010 SERHL2Q9H4I8 314 aa17.78■□□□□ 0.44
USP49-202ENST00000373010 NEUROD4Q9HD90 331 aa17.78■□□□□ 0.44
USP49-202ENST00000373010 SELENONQ9NZV5 590 aa17.78■□□□□ 0.44
USP49-202ENST00000373010 A0A0A6YYD5 115 aa17.78■□□□□ 0.44
USP49-202ENST00000373010 SH3PXD2BA1X283 911 aa17.78■□□□□ 0.44
USP49-202ENST00000373010 LRIT2A6NDA9 550 aa17.78■□□□□ 0.44
USP49-202ENST00000373010 GLOD5A6NK44 160 aa17.78■□□□□ 0.44
USP49-202ENST00000373010 C4orf51C9J302 202 aa17.78■□□□□ 0.44
USP49-202ENST00000373010 FAM227AF5H4B4 570 aa17.78■□□□□ 0.44
USP49-202ENST00000373010 J3QRK9 145 aa17.78■□□□□ 0.44
USP49-202ENST00000373010 HMGN4O00479 90 aa17.78■□□□□ 0.44
USP49-202ENST00000373010 CLEC3AO75596 197 aa17.78■□□□□ 0.44
USP49-202ENST00000373010 ADPRMQ3LIE5 342 aa17.78■□□□□ 0.44
USP49-202ENST00000373010 SZRD1Q7Z422 152 aa17.78■□□□□ 0.44
USP49-202ENST00000373010 NLGN4XQ8N0W4 816 aa17.78■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms