RNA–Protein interactions for RNA: ENST00000372447.7

C9orf78-201, Transcript of chromosome 9 open reading frame 78, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf78, Length 1,795 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf78-201ENST00000372447 TAC3Q9UHF0 121 aa15.23■□□□□ 0.03
C9orf78-201ENST00000372447 POMT2Q9UKY4 750 aa15.23■□□□□ 0.03
C9orf78-201ENST00000372447 MN1Q10571 1320 aaPredicted RBP15.23■□□□□ 0.03
C9orf78-201ENST00000372447 IGHV5-10-1A0A0J9YXX1 117 aa15.22■□□□□ 0.03
C9orf78-201ENST00000372447 SAP18O00422 153 aaKnown RBP15.22■□□□□ 0.03
C9orf78-201ENST00000372447 CPSF4O95639 269 aaKnown RBP15.22■□□□□ 0.03
C9orf78-201ENST00000372447 LSSP48449 732 aa15.22■□□□□ 0.03
C9orf78-201ENST00000372447 SNAP47Q5SQN1 464 aa15.22■□□□□ 0.03
C9orf78-201ENST00000372447 ANXA8L1Q5VT79 327 aa15.22■□□□□ 0.03
C9orf78-201ENST00000372447 SPESP1Q6UW49 350 aa15.22■□□□□ 0.03
C9orf78-201ENST00000372447 ENPP6Q6UWR7 440 aa15.22■□□□□ 0.03
C9orf78-201ENST00000372447 RBM44Q6ZP01 1051 aaKnown RBP15.22■□□□□ 0.03
C9orf78-201ENST00000372447 B3GNT8Q7Z7M8 397 aa15.22■□□□□ 0.03
C9orf78-201ENST00000372447 CARM1Q86X55 608 aa15.22■□□□□ 0.03
C9orf78-201ENST00000372447 FAM20CQ8IXL6 584 aa15.22■□□□□ 0.03
C9orf78-201ENST00000372447 FAM86B1Q8N7N1 296 aa15.22■□□□□ 0.03
C9orf78-201ENST00000372447 POP5Q969H6 163 aaKnown RBP15.22■□□□□ 0.03
C9orf78-201ENST00000372447 SLC22A18Q96BI1 424 aa15.22■□□□□ 0.03
C9orf78-201ENST00000372447 VPS50Q96JG6 964 aa15.22■□□□□ 0.03
C9orf78-201ENST00000372447 MAP3K3Q99759 626 aa15.22■□□□□ 0.03
C9orf78-201ENST00000372447 DPYSL5Q9BPU6 564 aa15.22■□□□□ 0.03
C9orf78-201ENST00000372447 PCBD2Q9H0N5 130 aa15.22■□□□□ 0.03
C9orf78-201ENST00000372447 PELI2Q9HAT8 420 aa15.22■□□□□ 0.03
C9orf78-201ENST00000372447 DCAF13Q9NV06 445 aaKnown RBP15.22■□□□□ 0.03
C9orf78-201ENST00000372447 BTNL2Q9UIR0 455 aa15.22■□□□□ 0.03
C9orf78-201ENST00000372447 ERVK-11Q9UQG0 969 aa15.22■□□□□ 0.03
C9orf78-201ENST00000372447 DLGAP1O14490 977 aa15.21■□□□□ 0.03
C9orf78-201ENST00000372447 DEAF1O75398 565 aaPredicted RBP15.21■□□□□ 0.03
C9orf78-201ENST00000372447 TNFAIP8O95379 198 aa15.21■□□□□ 0.03
C9orf78-201ENST00000372447 MT-CO3P00414 261 aa15.21■□□□□ 0.03
C9orf78-201ENST00000372447 PTX3P26022 381 aaPredicted RBP15.21■□□□□ 0.03
C9orf78-201ENST00000372447 MYBPC1Q00872 1141 aa15.21■□□□□ 0.03
C9orf78-201ENST00000372447 ZFP36L1Q07352 338 aaKnown RBP15.21■□□□□ 0.03
C9orf78-201ENST00000372447 RBBP5Q15291 538 aaKnown RBP15.21■□□□□ 0.03
C9orf78-201ENST00000372447 HES3Q5TGS1 186 aa15.21■□□□□ 0.03
C9orf78-201ENST00000372447 ZNF551Q7Z340 670 aaPredicted RBP15.21■□□□□ 0.03
C9orf78-201ENST00000372447 VN1R5Q7Z5H4 357 aa15.21■□□□□ 0.03
C9orf78-201ENST00000372447 TRIM73Q86UV7 250 aa15.21■□□□□ 0.03
C9orf78-201ENST00000372447 METTL4Q8N3J2 472 aa15.21■□□□□ 0.03
C9orf78-201ENST00000372447 PUM2Q8TB72 1066 aaKnown RBP eCLIP15.21■□□□□ 0.037e-18■■■□□ 17.7
C9orf78-201ENST00000372447 ADAMTS14Q8WXS8 1223 aa15.21■□□□□ 0.03
C9orf78-201ENST00000372447 TFAP2CQ92754 450 aa15.21■□□□□ 0.03
C9orf78-201ENST00000372447 SLC47A1Q96FL8 570 aa15.21■□□□□ 0.03
C9orf78-201ENST00000372447 PHF12Q96QT6 1004 aa15.21■□□□□ 0.03
C9orf78-201ENST00000372447 MYCBPQ99417 103 aaPredicted RBP15.21■□□□□ 0.03
C9orf78-201ENST00000372447 ANKRD60Q9BZ19 345 aa15.21■□□□□ 0.03
C9orf78-201ENST00000372447 ATP6V1HQ9UI12 483 aa15.21■□□□□ 0.03
C9orf78-201ENST00000372447 ZNF639Q9UID6 485 aa15.21■□□□□ 0.03
C9orf78-201ENST00000372447 EXO1Q9UQ84 846 aaKnown RBP15.21■□□□□ 0.03
C9orf78-201ENST00000372447 PCDHB11Q9Y5F2 797 aa15.21■□□□□ 0.03
C9orf78-201ENST00000372447 SPTBN2O15020 2390 aa15.21■□□□□ 0.03
C9orf78-201ENST00000372447 A8MU76 341 aa15.21■□□□□ 0.02
C9orf78-201ENST00000372447 PRSS23O95084 383 aa15.21■□□□□ 0.02
C9orf78-201ENST00000372447 GBAP04062 536 aa15.21■□□□□ 0.02
C9orf78-201ENST00000372447 GPX2P18283 190 aa15.21■□□□□ 0.02
C9orf78-201ENST00000372447 CXCR2P25025 360 aa15.21■□□□□ 0.02
C9orf78-201ENST00000372447 ID4P47928 161 aa15.21■□□□□ 0.02
C9orf78-201ENST00000372447 LRRC74AQ0VAA2 488 aa15.21■□□□□ 0.02
C9orf78-201ENST00000372447 NKG7Q16617 165 aa15.21■□□□□ 0.02
C9orf78-201ENST00000372447 RCBTB1Q8NDN9 531 aa15.21■□□□□ 0.02
C9orf78-201ENST00000372447 AIF1LQ9BQI0 150 aa15.21■□□□□ 0.02
C9orf78-201ENST00000372447 BHLHE41Q9C0J9 482 aaPredicted RBP15.21■□□□□ 0.02
C9orf78-201ENST00000372447 REEP4Q9H6H4 257 aa15.21■□□□□ 0.02
C9orf78-201ENST00000372447 ZNF696Q9H7X3 374 aa15.21■□□□□ 0.02
C9orf78-201ENST00000372447 NTN4Q9HB63 628 aa15.21■□□□□ 0.02
C9orf78-201ENST00000372447 OLAHQ9NV23 265 aa15.21■□□□□ 0.02
C9orf78-201ENST00000372447 SH3BP4Q9P0V3 963 aa15.21■□□□□ 0.02
C9orf78-201ENST00000372447 CLCA2Q9UQC9 943 aa15.21■□□□□ 0.02
C9orf78-201ENST00000372447 KNTC1P50748 2209 aa15.21■□□□□ 0.02
C9orf78-201ENST00000372447 IGHV5-51A0A0C4DH38 117 aa15.2■□□□□ 0.02
C9orf78-201ENST00000372447 RNASET2O00584 256 aaKnown RBP15.2■□□□□ 0.02
C9orf78-201ENST00000372447 EI24O14681 340 aa15.2■□□□□ 0.02
C9orf78-201ENST00000372447 PRKD3O94806 890 aa15.2■□□□□ 0.02
C9orf78-201ENST00000372447 SERPINA1P01009 418 aa15.2■□□□□ 0.02
C9orf78-201ENST00000372447 C1QCP02747 245 aa15.2■□□□□ 0.02
C9orf78-201ENST00000372447 ZNF23P17027 643 aa15.2■□□□□ 0.02
C9orf78-201ENST00000372447 IL1RNP18510 177 aa15.2■□□□□ 0.02
C9orf78-201ENST00000372447 EFNA1P20827 205 aaPredicted RBP15.2■□□□□ 0.02
C9orf78-201ENST00000372447 CCR8P51685 355 aa15.2■□□□□ 0.02
C9orf78-201ENST00000372447 SLC5A12Q1EHB4 618 aa15.2■□□□□ 0.02
C9orf78-201ENST00000372447 ISXQ2M1V0 245 aa15.2■□□□□ 0.02
C9orf78-201ENST00000372447 RNF220Q5VTB9 566 aa15.2■□□□□ 0.02
C9orf78-201ENST00000372447 GPR155Q7Z3F1 870 aa15.2■□□□□ 0.02
C9orf78-201ENST00000372447 ARHGAP22Q7Z5H3 698 aa15.2■□□□□ 0.02
C9orf78-201ENST00000372447 R3HCC1LQ7Z5L2 792 aaKnown RBP15.2■□□□□ 0.02
C9orf78-201ENST00000372447 ABHD11Q8NFV4 315 aa15.2■□□□□ 0.02
C9orf78-201ENST00000372447 OR2L3Q8NG85 312 aa15.2■□□□□ 0.02
C9orf78-201ENST00000372447 C16orf78Q8WTQ4 265 aa15.2■□□□□ 0.02
C9orf78-201ENST00000372447 CCDC74BQ96LY2 380 aa15.2■□□□□ 0.02
C9orf78-201ENST00000372447 CD180Q99467 661 aa15.2■□□□□ 0.02
C9orf78-201ENST00000372447 KLHL25Q9H0H3 589 aa15.2■□□□□ 0.02
C9orf78-201ENST00000372447 RHBGQ9H310 441 aa15.2■□□□□ 0.02
C9orf78-201ENST00000372447 MAGIXQ9H6Y5 334 aa15.2■□□□□ 0.02
C9orf78-201ENST00000372447 C1GALT1Q9NS00 363 aa15.2■□□□□ 0.02
C9orf78-201ENST00000372447 CUEDC1Q9NWM3 386 aaPredicted RBP15.2■□□□□ 0.02
C9orf78-201ENST00000372447 SEMA5BQ9P283 1151 aa15.2■□□□□ 0.02
C9orf78-201ENST00000372447 KLHL20Q9Y2M5 609 aa15.2■□□□□ 0.02
C9orf78-201ENST00000372447 CROCCQ5TZA2 2017 aa15.2■□□□□ 0.02
C9orf78-201ENST00000372447 COL27A1Q8IZC6 1860 aaPredicted RBP15.2■□□□□ 0.02
C9orf78-201ENST00000372447 TLCD2A6NGC4 264 aa15.19■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms