RNA–Protein interactions for RNA: ENST00000372066.7

LDB3-204, Transcript of LIM domain binding 3, humanhuman

TSL 1 (best) BASIC

Gene LDB3, Length 1,598 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-204ENST00000372066 LGR4Q9BXB1 951 aa13.4□□□□□ -0.26
LDB3-204ENST00000372066 MS4A8Q9BY19 250 aa13.4□□□□□ -0.26
LDB3-204ENST00000372066 SPNS1Q9H2V7 528 aa13.4□□□□□ -0.26
LDB3-204ENST00000372066 TMEM38AQ9H6F2 299 aa13.4□□□□□ -0.26
LDB3-204ENST00000372066 PREBQ9HCU5 417 aa13.4□□□□□ -0.26
LDB3-204ENST00000372066 FAM118AQ9NWS6 357 aa13.4□□□□□ -0.26
LDB3-204ENST00000372066 TAS2R9Q9NYW1 312 aa13.4□□□□□ -0.26
LDB3-204ENST00000372066 TAC3Q9UHF0 121 aa13.4□□□□□ -0.26
LDB3-204ENST00000372066 ADAM29Q9UKF5 820 aa13.4□□□□□ -0.26
LDB3-204ENST00000372066 FAF1Q9UNN5 650 aaPredicted RBP13.4□□□□□ -0.26
LDB3-204ENST00000372066 PCYT1BQ9Y5K3 369 aaPredicted RBP13.4□□□□□ -0.26
LDB3-204ENST00000372066 ANKRD11Q6UB99 2663 aaPredicted RBP13.4□□□□□ -0.26
LDB3-204ENST00000372066 EME2A4GXA9 379 aaPredicted RBP13.39□□□□□ -0.27
LDB3-204ENST00000372066 WNT1P04628 370 aa13.39□□□□□ -0.27
LDB3-204ENST00000372066 CD38P28907 300 aa13.39□□□□□ -0.27
LDB3-204ENST00000372066 CLCNKAP51800 687 aa13.39□□□□□ -0.27
LDB3-204ENST00000372066 TPD52P55327 224 aaPredicted RBP13.39□□□□□ -0.27
LDB3-204ENST00000372066 TAS2R50P59544 299 aa13.39□□□□□ -0.27
LDB3-204ENST00000372066 TRA2BP62995 288 aaKnown RBP13.39□□□□□ -0.27
LDB3-204ENST00000372066 CAMK2BQ13554 666 aa13.39□□□□□ -0.27
LDB3-204ENST00000372066 SPIDRQ14159 915 aa13.39□□□□□ -0.27
LDB3-204ENST00000372066 SF1Q15637 639 aaKnown RBP13.39□□□□□ -0.27
LDB3-204ENST00000372066 GCNT6Q5T4J0 391 aa13.39□□□□□ -0.27
LDB3-204ENST00000372066 VN1R5Q7Z5H4 357 aa13.39□□□□□ -0.27
LDB3-204ENST00000372066 HORMAD1Q86X24 394 aa13.39□□□□□ -0.27
LDB3-204ENST00000372066 OR14C36Q8NHC7 312 aa13.39□□□□□ -0.27
LDB3-204ENST00000372066 HSH2DQ96JZ2 352 aa13.39□□□□□ -0.27
LDB3-204ENST00000372066 MUS81Q96NY9 551 aa13.39□□□□□ -0.27
LDB3-204ENST00000372066 MBOAT4Q96T53 435 aa13.39□□□□□ -0.27
LDB3-204ENST00000372066 SLC35A5Q9BS91 424 aa13.39□□□□□ -0.27
LDB3-204ENST00000372066 MVB12BQ9H7P6 319 aa13.39□□□□□ -0.27
LDB3-204ENST00000372066 MIEF1Q9NQG6 463 aa13.39□□□□□ -0.27
LDB3-204ENST00000372066 SPASTQ9UBP0 616 aa13.39□□□□□ -0.27
LDB3-204ENST00000372066 ZFR2Q9UPR6 939 aaKnown RBP13.39□□□□□ -0.27
LDB3-204ENST00000372066 ERVK-11Q9UQG0 969 aa13.39□□□□□ -0.27
LDB3-204ENST00000372066 SLC17A4Q9Y2C5 497 aa13.39□□□□□ -0.27
LDB3-204ENST00000372066 PRKAB1Q9Y478 270 aa13.39□□□□□ -0.27
LDB3-204ENST00000372066 HSPE1-MOB4S4R3N1 261 aa13.39□□□□□ -0.27
LDB3-204ENST00000372066 HEATR5BQ9P2D3 2071 aa13.39□□□□□ -0.27
LDB3-204ENST00000372066 CABIN1Q9Y6J0 2220 aa13.38□□□□□ -0.27
LDB3-204ENST00000372066 CAPN5O15484 640 aaPredicted RBP13.38□□□□□ -0.27
LDB3-204ENST00000372066 SUV39H1O43463 412 aa13.38□□□□□ -0.27
LDB3-204ENST00000372066 HS6ST1O60243 411 aa13.38□□□□□ -0.27
LDB3-204ENST00000372066 UGT2B11O75310 529 aa13.38□□□□□ -0.27
LDB3-204ENST00000372066 SH3BGRLO75368 114 aa13.38□□□□□ -0.27
LDB3-204ENST00000372066 SEC24DO94855 1032 aaPredicted RBP13.38□□□□□ -0.27
LDB3-204ENST00000372066 LDOC1O95751 146 aaPredicted RBP13.38□□□□□ -0.27
LDB3-204ENST00000372066 IFNA14P01570 189 aa13.38□□□□□ -0.27
LDB3-204ENST00000372066 KLK1P06870 262 aa13.38□□□□□ -0.27
LDB3-204ENST00000372066 HOXC4P09017 264 aaPredicted RBP13.38□□□□□ -0.27
LDB3-204ENST00000372066 CCR5P51681 352 aa13.38□□□□□ -0.27
LDB3-204ENST00000372066 ARFIP1P53367 373 aa13.38□□□□□ -0.27
LDB3-204ENST00000372066 HBA1P69905 142 aa13.38□□□□□ -0.27
LDB3-204ENST00000372066 MEF2AQ02078 507 aaPredicted RBP13.38□□□□□ -0.27
LDB3-204ENST00000372066 KCNAB2Q13303 367 aa13.38□□□□□ -0.27
LDB3-204ENST00000372066 ZNF630Q2M218 657 aaPredicted RBP13.38□□□□□ -0.27
LDB3-204ENST00000372066 ZIK1Q3SY52 487 aaPredicted RBP13.38□□□□□ -0.27
LDB3-204ENST00000372066 ZNF773Q6PK81 442 aa13.38□□□□□ -0.27
LDB3-204ENST00000372066 CCDC80Q76M96 950 aa13.38□□□□□ -0.27
LDB3-204ENST00000372066 TMPRSS12Q86WS5 348 aa13.38□□□□□ -0.27
LDB3-204ENST00000372066 WDR48Q8TAF3 677 aa13.38□□□□□ -0.27
LDB3-204ENST00000372066 ZNF420Q8TAQ5 688 aaPredicted RBP13.38□□□□□ -0.27
LDB3-204ENST00000372066 REEP1Q9H902 201 aa13.38□□□□□ -0.27
LDB3-204ENST00000372066 SMURF2Q9HAU4 748 aa13.38□□□□□ -0.27
LDB3-204ENST00000372066 MBNL1Q9NR56 388 aaKnown RBP13.38□□□□□ -0.27
LDB3-204ENST00000372066 UTS2RQ9UKP6 389 aa13.38□□□□□ -0.27
LDB3-204ENST00000372066 PLAGL1Q9UM63 463 aa13.38□□□□□ -0.27
LDB3-204ENST00000372066 PADI2Q9Y2J8 665 aa13.38□□□□□ -0.27
LDB3-204ENST00000372066 HEBP2Q9Y5Z4 205 aa13.38□□□□□ -0.27
LDB3-204ENST00000372066 DOCK9Q9BZ29 2069 aa13.38□□□□□ -0.27
LDB3-204ENST00000372066 TBC1D3DA0A087WVF3 549 aa13.37□□□□□ -0.27
LDB3-204ENST00000372066 TBC1D3IA0A087WXS9 549 aa13.37□□□□□ -0.27
LDB3-204ENST00000372066 TBC1D3EA0A087X179 549 aa13.37□□□□□ -0.27
LDB3-204ENST00000372066 TBC1D3KA0A087X1G2 549 aa13.37□□□□□ -0.27
LDB3-204ENST00000372066 A0A1W2PRB8 838 aa13.37□□□□□ -0.27
LDB3-204ENST00000372066 TBC1D3FA6NER0 549 aaPredicted RBP13.37□□□□□ -0.27
LDB3-204ENST00000372066 PRR19A6NJB7 356 aa13.37□□□□□ -0.27
LDB3-204ENST00000372066 TBC1D3LB9A6J9 549 aa13.37□□□□□ -0.27
LDB3-204ENST00000372066 CACNB4O00305 520 aaPredicted RBP13.37□□□□□ -0.27
LDB3-204ENST00000372066 TNFRSF21O75509 655 aa13.37□□□□□ -0.27
LDB3-204ENST00000372066 CLEC3AO75596 197 aa13.37□□□□□ -0.27
LDB3-204ENST00000372066 FKBP9O95302 570 aa13.37□□□□□ -0.27
LDB3-204ENST00000372066 CLIC3O95833 236 aa13.37□□□□□ -0.27
LDB3-204ENST00000372066 C6orf47O95873 294 aa13.37□□□□□ -0.27
LDB3-204ENST00000372066 TBC1D3HP0C7X1 549 aa13.37□□□□□ -0.27
LDB3-204ENST00000372066 JUNBP17275 347 aaPredicted RBP13.37□□□□□ -0.27
LDB3-204ENST00000372066 UQCRC2P22695 453 aa13.37□□□□□ -0.27
LDB3-204ENST00000372066 IGFBP5P24593 272 aa13.37□□□□□ -0.27
LDB3-204ENST00000372066 TPP2P29144 1249 aaPredicted RBP13.37□□□□□ -0.27
LDB3-204ENST00000372066 PKLRP30613 574 aa13.37□□□□□ -0.27
LDB3-204ENST00000372066 RYKP34925 604 aa13.37□□□□□ -0.27
LDB3-204ENST00000372066 RAB28P51157 221 aa13.37□□□□□ -0.27
LDB3-204ENST00000372066 CDH15P55291 814 aa13.37□□□□□ -0.27
LDB3-204ENST00000372066 ABATP80404 500 aa13.37□□□□□ -0.27
LDB3-204ENST00000372066 HEPACAMQ14CZ8 416 aa13.37□□□□□ -0.27
LDB3-204ENST00000372066 BROXQ5VW32 411 aa13.37□□□□□ -0.27
LDB3-204ENST00000372066 TBC1D3GQ6DHY5 549 aa13.37□□□□□ -0.27
LDB3-204ENST00000372066 TBC1D3CQ6IPX1 549 aa13.37□□□□□ -0.27
LDB3-204ENST00000372066 NUDT13Q86X67 352 aa13.37□□□□□ -0.27
LDB3-204ENST00000372066 DCP2Q8IU60 420 aaKnown RBP13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms