RNA–Protein interactions for RNA: ENST00000368460.7

PBXIP1-201, Transcript of PBX homeobox interacting protein 1, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene PBXIP1, Length 1,175 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBXIP1-201ENST00000368460 CNTN4Q8IWV2 1026 aa17.04■□□□□ 0.32
PBXIP1-201ENST00000368460 ZNF321PQ8N8H1 164 aa17.04■□□□□ 0.32
PBXIP1-201ENST00000368460 GRK7Q8WTQ7 553 aa17.04■□□□□ 0.32
PBXIP1-201ENST00000368460 PTPMT1Q8WUK0 201 aaPredicted RBP17.04■□□□□ 0.32
PBXIP1-201ENST00000368460 RNASE6Q93091 150 aaKnown RBP17.04■□□□□ 0.32
PBXIP1-201ENST00000368460 MBD6Q96DN6 1003 aa17.04■□□□□ 0.32
PBXIP1-201ENST00000368460 DLL4Q9NR61 685 aa17.04■□□□□ 0.32
PBXIP1-201ENST00000368460 SLC17A6Q9P2U8 582 aa17.04■□□□□ 0.32
PBXIP1-201ENST00000368460 SPRR3Q9UBC9 169 aa17.04■□□□□ 0.32
PBXIP1-201ENST00000368460 FOXD3Q9UJU5 478 aaPredicted RBP17.04■□□□□ 0.32
PBXIP1-201ENST00000368460 DAPP1Q9UN19 280 aa17.04■□□□□ 0.32
PBXIP1-201ENST00000368460 RPH3AQ9Y2J0 694 aaPredicted RBP17.04■□□□□ 0.32
PBXIP1-201ENST00000368460 FLNAP21333 2647 aaKnown RBP17.04■□□□□ 0.32
PBXIP1-201ENST00000368460 CDC7O00311 574 aa17.03■□□□□ 0.32
PBXIP1-201ENST00000368460 CLGNO14967 610 aa17.03■□□□□ 0.32
PBXIP1-201ENST00000368460 TACR1P25103 407 aa17.03■□□□□ 0.32
PBXIP1-201ENST00000368460 TBL3Q12788 808 aaKnown RBP17.03■□□□□ 0.32
PBXIP1-201ENST00000368460 PPP1R7Q15435 360 aa17.03■□□□□ 0.32
PBXIP1-201ENST00000368460 DEFB113Q30KQ7 82 aa17.03■□□□□ 0.32
PBXIP1-201ENST00000368460 PRAMEF20Q5VT98 475 aa17.03■□□□□ 0.32
PBXIP1-201ENST00000368460 SLCO4C1Q6ZQN7 724 aa17.03■□□□□ 0.32
PBXIP1-201ENST00000368460 GALNT7Q86SF2 657 aa17.03■□□□□ 0.32
PBXIP1-201ENST00000368460 ULK2Q8IYT8 1036 aa17.03■□□□□ 0.32
PBXIP1-201ENST00000368460 NKAPQ8N5F7 415 aaKnown RBP17.03■□□□□ 0.32
PBXIP1-201ENST00000368460 PDLIM5Q96HC4 596 aaKnown RBP17.03■□□□□ 0.32
PBXIP1-201ENST00000368460 CAPZA3Q96KX2 299 aa17.03■□□□□ 0.32
PBXIP1-201ENST00000368460 QRFPRQ96P65 431 aa17.03■□□□□ 0.32
PBXIP1-201ENST00000368460 NAP1L3Q99457 506 aaPredicted RBP17.03■□□□□ 0.32
PBXIP1-201ENST00000368460 CAPS2Q9BXY5 557 aa17.03■□□□□ 0.32
PBXIP1-201ENST00000368460 SEMA4BQ9NPR2 832 aaPredicted RBP17.03■□□□□ 0.32
PBXIP1-201ENST00000368460 IKZF3Q9UKT9 509 aa17.03■□□□□ 0.32
PBXIP1-201ENST00000368460 CBLCQ9ULV8 474 aa17.03■□□□□ 0.32
PBXIP1-201ENST00000368460 C15orf38-AP3S2A0A0A6YYH1 394 aa17.02■□□□□ 0.32
PBXIP1-201ENST00000368460 TUBAL3A6NHL2 446 aa17.02■□□□□ 0.32
PBXIP1-201ENST00000368460 CYR61O00622 381 aa17.02■□□□□ 0.32
PBXIP1-201ENST00000368460 LDB3O75112 727 aa17.02■□□□□ 0.32
PBXIP1-201ENST00000368460 BANF1O75531 89 aa17.02■□□□□ 0.32
PBXIP1-201ENST00000368460 ZNF37AP17032 561 aaPredicted RBP17.02■□□□□ 0.32
PBXIP1-201ENST00000368460 GDF5P43026 501 aa17.02■□□□□ 0.32
PBXIP1-201ENST00000368460 TRPC1P48995 793 aa17.02■□□□□ 0.32
PBXIP1-201ENST00000368460 CDKL1Q00532 357 aa17.02■□□□□ 0.32
PBXIP1-201ENST00000368460 ID2Q02363 134 aa17.02■□□□□ 0.32
PBXIP1-201ENST00000368460 PPP1R3AQ16821 1122 aa17.02■□□□□ 0.32
PBXIP1-201ENST00000368460 ADAMTSL2Q86TH1 951 aa17.02■□□□□ 0.32
PBXIP1-201ENST00000368460 KIF18BQ86Y91 864 aa17.02■□□□□ 0.32
PBXIP1-201ENST00000368460 RELL2Q8NC24 303 aaPredicted RBP17.02■□□□□ 0.32
PBXIP1-201ENST00000368460 FAM13CQ8NE31 585 aa17.02■□□□□ 0.32
PBXIP1-201ENST00000368460 CFAP36Q96G28 342 aa17.02■□□□□ 0.32
PBXIP1-201ENST00000368460 ROGDIQ9GZN7 287 aa17.02■□□□□ 0.32
PBXIP1-201ENST00000368460 PITHD1Q9GZP4 211 aaPredicted RBP17.02■□□□□ 0.32
PBXIP1-201ENST00000368460 SLC6A15Q9H2J7 730 aa17.02■□□□□ 0.32
PBXIP1-201ENST00000368460 ZNF703Q9H7S9 590 aaPredicted RBP17.02■□□□□ 0.32
PBXIP1-201ENST00000368460 NEUROD4Q9HD90 331 aa17.02■□□□□ 0.32
PBXIP1-201ENST00000368460 ZFP64Q9NPA5 681 aa17.02■□□□□ 0.32
PBXIP1-201ENST00000368460 CTNNAL1Q9UBT7 734 aa17.02■□□□□ 0.32
PBXIP1-201ENST00000368460 ASIC3Q9UHC3 531 aa17.02■□□□□ 0.32
PBXIP1-201ENST00000368460 OARD1Q9Y530 152 aa17.02■□□□□ 0.32
PBXIP1-201ENST00000368460 NCF1BA6NI72 391 aaPredicted RBP17.01■□□□□ 0.31
PBXIP1-201ENST00000368460 NCF1CA8MVU1 366 aaPredicted RBP17.01■□□□□ 0.31
PBXIP1-201ENST00000368460 IL2RAP01589 272 aa17.01■□□□□ 0.31
PBXIP1-201ENST00000368460 NCF1P14598 390 aaPredicted RBP17.01■□□□□ 0.31
PBXIP1-201ENST00000368460 ENDOUP21128 410 aaKnown RBP17.01■□□□□ 0.31
PBXIP1-201ENST00000368460 CDC25BP30305 580 aa17.01■□□□□ 0.31
PBXIP1-201ENST00000368460 KCNC1P48547 511 aa17.01■□□□□ 0.31
PBXIP1-201ENST00000368460 MPEG1Q2M385 716 aa17.01■□□□□ 0.31
PBXIP1-201ENST00000368460 PIGGQ5H8A4 983 aa17.01■□□□□ 0.31
PBXIP1-201ENST00000368460 TEDDM1Q5T9Z0 273 aa17.01■□□□□ 0.31
PBXIP1-201ENST00000368460 ABHD17CQ6PCB6 329 aa17.01■□□□□ 0.31
PBXIP1-201ENST00000368460 MAATS1Q7Z4T9 603 aa17.01■□□□□ 0.31
PBXIP1-201ENST00000368460 SRFBP1Q8NEF9 429 aaKnown RBP17.01■□□□□ 0.31
PBXIP1-201ENST00000368460 C7orf57Q8NEG2 295 aa17.01■□□□□ 0.31
PBXIP1-201ENST00000368460 WFDC11Q8NEX6 87 aa17.01■□□□□ 0.31
PBXIP1-201ENST00000368460 NEIL3Q8TAT5 605 aa17.01■□□□□ 0.31
PBXIP1-201ENST00000368460 C18orf12Q96KH6 178 aa17.01■□□□□ 0.31
PBXIP1-201ENST00000368460 DGAT2Q96PD7 388 aa17.01■□□□□ 0.31
PBXIP1-201ENST00000368460 KCNC2Q96PR1 638 aa17.01■□□□□ 0.31
PBXIP1-201ENST00000368460 NT5DC2Q9H857 520 aa17.01■□□□□ 0.31
PBXIP1-201ENST00000368460 WWOXQ9NZC7 414 aa17.01■□□□□ 0.31
PBXIP1-201ENST00000368460 PCDHGB3Q9Y5G1 929 aa17.01■□□□□ 0.31
PBXIP1-201ENST00000368460 NINQ8N4C6 2090 aa17■□□□□ 0.31
PBXIP1-201ENST00000368460 GOLGA6L10A0A0M3HER8 536 aa17■□□□□ 0.31
PBXIP1-201ENST00000368460 ZNF354AO60765 605 aaPredicted RBP17■□□□□ 0.31
PBXIP1-201ENST00000368460 GDF1P27539 372 aa17■□□□□ 0.31
PBXIP1-201ENST00000368460 MSH2P43246 934 aa17■□□□□ 0.31
PBXIP1-201ENST00000368460 SF3B4Q15427 424 aaKnown RBP eCLIP17■□□□□ 0.317e-7■■■■■ 44.3
PBXIP1-201ENST00000368460 C18orf21Q32NC0 220 aaPredicted RBP17■□□□□ 0.31
PBXIP1-201ENST00000368460 RNASEH2BQ5TBB1 312 aaKnown RBP17■□□□□ 0.31
PBXIP1-201ENST00000368460 SNX31Q8N9S9 440 aa17■□□□□ 0.31
PBXIP1-201ENST00000368460 ANKRD7Q92527 254 aa17■□□□□ 0.31
PBXIP1-201ENST00000368460 SPACA9Q96E40 222 aaPredicted RBP17■□□□□ 0.31
PBXIP1-201ENST00000368460 HSPBAP1Q96EW2 488 aa17■□□□□ 0.31
PBXIP1-201ENST00000368460 MS4A14Q96JA4 679 aa17■□□□□ 0.31
PBXIP1-201ENST00000368460 ART5Q96L15 291 aa17■□□□□ 0.31
PBXIP1-201ENST00000368460 KRT12Q99456 494 aa17■□□□□ 0.31
PBXIP1-201ENST00000368460 SH3GL2Q99962 352 aa17■□□□□ 0.31
PBXIP1-201ENST00000368460 YIPF4Q9BSR8 244 aa17■□□□□ 0.31
PBXIP1-201ENST00000368460 LYRM4Q9HD34 91 aa17■□□□□ 0.31
PBXIP1-201ENST00000368460 SDAD1Q9NVU7 687 aaKnown RBP eCLIP17■□□□□ 0.31
PBXIP1-201ENST00000368460 QPCTLQ9NXS2 382 aa17■□□□□ 0.31
PBXIP1-201ENST00000368460 GPRC5BQ9NZH0 403 aa17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms