RNA–Protein interactions for RNA: ENST00000368226.8

PTPRK-207, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PTPRK, Length 6,087 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-207ENST00000368226 OR7A10O76100 309 aa12.36□□□□□ -0.43
PTPRK-207ENST00000368226 ZNF806P0C7X5 589 aa12.36□□□□□ -0.43
PTPRK-207ENST00000368226 MAOBP27338 520 aa12.36□□□□□ -0.43
PTPRK-207ENST00000368226 ARPC4P59998 168 aa12.36□□□□□ -0.43
PTPRK-207ENST00000368226 GRIN2CQ14957 1233 aa12.36□□□□□ -0.43
PTPRK-207ENST00000368226 KLHDC10Q6PID8 442 aa12.36□□□□□ -0.43
PTPRK-207ENST00000368226 ZC3H14Q6PJT7 736 aaKnown RBP12.36□□□□□ -0.43
PTPRK-207ENST00000368226 LRRC25Q8N386 305 aaPredicted RBP12.36□□□□□ -0.43
PTPRK-207ENST00000368226 IL20RAQ9UHF4 553 aa12.36□□□□□ -0.43
PTPRK-207ENST00000368226 SAGE2PA6NJ88 616 aa12.36□□□□□ -0.43
PTPRK-207ENST00000368226 PROM1O43490 865 aa12.36□□□□□ -0.43
PTPRK-207ENST00000368226 XPNPEP2O43895 674 aa12.36□□□□□ -0.43
PTPRK-207ENST00000368226 SLC6A4P31645 630 aa12.36□□□□□ -0.43
PTPRK-207ENST00000368226 DSG2Q14126 1118 aa12.36□□□□□ -0.43
PTPRK-207ENST00000368226 TRAM2Q15035 370 aa12.36□□□□□ -0.43
PTPRK-207ENST00000368226 ZNF789Q5FWF6 425 aa12.36□□□□□ -0.43
PTPRK-207ENST00000368226 TNFAIP8L3Q5GJ75 292 aa12.36□□□□□ -0.43
PTPRK-207ENST00000368226 SCD5Q86SK9 330 aa12.36□□□□□ -0.43
PTPRK-207ENST00000368226 NSMAFQ92636 917 aa12.36□□□□□ -0.43
PTPRK-207ENST00000368226 ZNF717Q9BY31 904 aaPredicted RBP12.36□□□□□ -0.43
PTPRK-207ENST00000368226 TIMMDC1Q9NPL8 285 aa12.36□□□□□ -0.43
PTPRK-207ENST00000368226 PAK6Q9NQU5 681 aaPredicted RBP12.36□□□□□ -0.43
PTPRK-207ENST00000368226 MKLN1Q9UL63 735 aa12.36□□□□□ -0.43
PTPRK-207ENST00000368226 CACNA1FO60840 1977 aa12.36□□□□□ -0.43
PTPRK-207ENST00000368226 SDHDO14521 159 aa12.36□□□□□ -0.43
PTPRK-207ENST00000368226 GALK2Q01415 458 aa12.36□□□□□ -0.43
PTPRK-207ENST00000368226 GINS1Q14691 196 aa12.36□□□□□ -0.43
PTPRK-207ENST00000368226 MAL2Q969L2 176 aa12.36□□□□□ -0.43
PTPRK-207ENST00000368226 TMEM80Q96HE8 168 aa12.36□□□□□ -0.43
PTPRK-207ENST00000368226 TMEM41AQ96HV5 264 aa12.36□□□□□ -0.43
PTPRK-207ENST00000368226 CPEB1Q9BZB8 566 aaKnown RBP12.36□□□□□ -0.43
PTPRK-207ENST00000368226 PFDN2Q9UHV9 154 aa12.36□□□□□ -0.43
PTPRK-207ENST00000368226 TNFRSF1BP20333 461 aa12.36□□□□□ -0.43
PTPRK-207ENST00000368226 GPR4P46093 362 aa12.36□□□□□ -0.43
PTPRK-207ENST00000368226 GAS6Q14393 721 aa12.36□□□□□ -0.43
PTPRK-207ENST00000368226 C15orf39Q6ZRI6 1047 aa12.36□□□□□ -0.43
PTPRK-207ENST00000368226 ZSCAN1Q8NBB4 408 aa12.36□□□□□ -0.43
PTPRK-207ENST00000368226 MAPKAP1Q9BPZ7 522 aa12.36□□□□□ -0.43
PTPRK-207ENST00000368226 TM9SF3Q9HD45 589 aa12.36□□□□□ -0.43
PTPRK-207ENST00000368226 CA5BQ9Y2D0 317 aa12.36□□□□□ -0.43
PTPRK-207ENST00000368226 GPR39O43194 453 aa12.35□□□□□ -0.43
PTPRK-207ENST00000368226 PROZP22891 400 aa12.35□□□□□ -0.43
PTPRK-207ENST00000368226 CD68P34810 354 aaPredicted RBP12.35□□□□□ -0.43
PTPRK-207ENST00000368226 FAM189BP81408 668 aa12.35□□□□□ -0.43
PTPRK-207ENST00000368226 NSDHLQ15738 373 aa12.35□□□□□ -0.43
PTPRK-207ENST00000368226 TMEM31Q5JXX7 168 aa12.35□□□□□ -0.43
PTPRK-207ENST00000368226 ERMP1Q7Z2K6 904 aa12.35□□□□□ -0.43
PTPRK-207ENST00000368226 PRR22Q8IZ63 422 aa12.35□□□□□ -0.43
PTPRK-207ENST00000368226 TOMM5Q8N4H5 51 aa12.35□□□□□ -0.43
PTPRK-207ENST00000368226 RBP7Q96R05 134 aa12.35□□□□□ -0.43
PTPRK-207ENST00000368226 STOX2Q9P2F5 926 aaPredicted RBP12.35□□□□□ -0.43
PTPRK-207ENST00000368226 FBXL3Q9UKT7 428 aa12.35□□□□□ -0.43
PTPRK-207ENST00000368226 ORC5O43913 435 aa12.35□□□□□ -0.43
PTPRK-207ENST00000368226 TYROBPO43914 113 aa12.35□□□□□ -0.43
PTPRK-207ENST00000368226 JUPP14923 745 aa12.35□□□□□ -0.43
PTPRK-207ENST00000368226 VAMP1P23763 118 aa12.35□□□□□ -0.43
PTPRK-207ENST00000368226 MAP2K4P45985 399 aa12.35□□□□□ -0.43
PTPRK-207ENST00000368226 SLC6A11P48066 632 aa12.35□□□□□ -0.43
PTPRK-207ENST00000368226 ACADVLP49748 655 aa12.35□□□□□ -0.43
PTPRK-207ENST00000368226 RPS26P11Q5JNZ5 115 aaPredicted RBP12.35□□□□□ -0.43
PTPRK-207ENST00000368226 TREML1Q86YW5 311 aa12.35□□□□□ -0.43
PTPRK-207ENST00000368226 FIBINQ8TAL6 211 aa12.35□□□□□ -0.43
PTPRK-207ENST00000368226 WDR20Q8TBZ3 569 aa12.35□□□□□ -0.43
PTPRK-207ENST00000368226 GAL3ST3Q96A11 431 aa12.35□□□□□ -0.43
PTPRK-207ENST00000368226 LRIG1Q96JA1 1093 aa12.35□□□□□ -0.43
PTPRK-207ENST00000368226 HSPA12BQ96MM6 686 aa12.35□□□□□ -0.43
PTPRK-207ENST00000368226 MVB12BQ9H7P6 319 aa12.35□□□□□ -0.43
PTPRK-207ENST00000368226 ZNF224Q9NZL3 707 aa12.35□□□□□ -0.43
PTPRK-207ENST00000368226 C13orf42A0A1B0GVH6 325 aa12.35□□□□□ -0.43
PTPRK-207ENST00000368226 TRIM64A6NGJ6 449 aa12.35□□□□□ -0.43
PTPRK-207ENST00000368226 KLF11O14901 512 aa12.35□□□□□ -0.43
PTPRK-207ENST00000368226 AURKAO14965 403 aa12.35□□□□□ -0.43
PTPRK-207ENST00000368226 HSPA12AO43301 675 aa12.35□□□□□ -0.43
PTPRK-207ENST00000368226 ADORA3P0DMS8 318 aa12.35□□□□□ -0.43
PTPRK-207ENST00000368226 MAZP56270 477 aaKnown RBP12.35□□□□□ -0.43
PTPRK-207ENST00000368226 RHDQ02161 417 aa12.35□□□□□ -0.43
PTPRK-207ENST00000368226 BLMHQ13867 455 aa12.35□□□□□ -0.43
PTPRK-207ENST00000368226 GTF2IRD2BQ6EKJ0 949 aa12.35□□□□□ -0.43
PTPRK-207ENST00000368226 BEND4Q6ZU67 534 aa12.35□□□□□ -0.43
PTPRK-207ENST00000368226 GTF2IRD2Q86UP8 949 aa12.35□□□□□ -0.43
PTPRK-207ENST00000368226 OR5P2Q8WZ92 322 aa12.35□□□□□ -0.43
PTPRK-207ENST00000368226 TAMM41Q96BW9 452 aa12.35□□□□□ -0.43
PTPRK-207ENST00000368226 TTYH1Q9H313 450 aaPredicted RBP12.35□□□□□ -0.43
PTPRK-207ENST00000368226 TRPV4Q9HBA0 871 aa12.35□□□□□ -0.43
PTPRK-207ENST00000368226 PRODH2Q9UF12 536 aa12.35□□□□□ -0.43
PTPRK-207ENST00000368226 CD207Q9UJ71 328 aa12.35□□□□□ -0.43
PTPRK-207ENST00000368226 PCDHGA2Q9Y5H1 932 aa12.35□□□□□ -0.43
PTPRK-207ENST00000368226 PCSK2P16519 638 aa12.35□□□□□ -0.43
PTPRK-207ENST00000368226 CRYZQ08257 329 aaKnown RBP12.35□□□□□ -0.43
PTPRK-207ENST00000368226 WSCD2Q2TBF2 565 aa12.35□□□□□ -0.43
PTPRK-207ENST00000368226 ZNF227Q86WZ6 799 aa12.35□□□□□ -0.43
PTPRK-207ENST00000368226 WACQ9BTA9 647 aa12.35□□□□□ -0.43
PTPRK-207ENST00000368226 SORBS1Q9BX66 1292 aaKnown RBP12.35□□□□□ -0.43
PTPRK-207ENST00000368226 RAB36O95755 333 aa12.34□□□□□ -0.43
PTPRK-207ENST00000368226 FDXRP22570 491 aa12.34□□□□□ -0.43
PTPRK-207ENST00000368226 AKR1D1P51857 326 aa12.34□□□□□ -0.43
PTPRK-207ENST00000368226 MPP2Q14168 576 aa12.34□□□□□ -0.43
PTPRK-207ENST00000368226 ELOAQ14241 798 aaKnown RBP12.34□□□□□ -0.43
PTPRK-207ENST00000368226 FIGLAQ6QHK4 219 aa12.34□□□□□ -0.43
PTPRK-207ENST00000368226 ZFAND4Q86XD8 727 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 89.8 ms