RNA–Protein interactions for RNA: ENST00000367740.2

VAMP4-202, Transcript of vesicle associated membrane protein 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VAMP4, Length 1,193 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4-202ENST00000367740 MED16Q9Y2X0 877 aa13.38□□□□□ -0.27
VAMP4-202ENST00000367740 MYOCOSA0A1B0GUC4 107 aa13.37□□□□□ -0.27
VAMP4-202ENST00000367740 TMCC2O75069 709 aa13.37□□□□□ -0.27
VAMP4-202ENST00000367740 TJP3O95049 919 aa13.37□□□□□ -0.27
VAMP4-202ENST00000367740 IFNA16P05015 189 aa13.37□□□□□ -0.27
VAMP4-202ENST00000367740 HPNP05981 417 aa13.37□□□□□ -0.27
VAMP4-202ENST00000367740 TBL3Q12788 808 aaKnown RBP13.37□□□□□ -0.27
VAMP4-202ENST00000367740 NAE1Q13564 534 aa13.37□□□□□ -0.27
VAMP4-202ENST00000367740 RUNX2Q13950 521 aa13.37□□□□□ -0.27
VAMP4-202ENST00000367740 RCAN2Q14206 197 aa13.37□□□□□ -0.27
VAMP4-202ENST00000367740 C6orf52Q5T4I8 152 aa13.37□□□□□ -0.27
VAMP4-202ENST00000367740 MRNIPQ6NTE8 343 aa13.37□□□□□ -0.27
VAMP4-202ENST00000367740 PLXDC2Q6UX71 529 aa13.37□□□□□ -0.27
VAMP4-202ENST00000367740 GCNT2Q8N0V5 402 aa13.37□□□□□ -0.27
VAMP4-202ENST00000367740 ANKRD53Q8N9V6 530 aa13.37□□□□□ -0.27
VAMP4-202ENST00000367740 FAM47BQ8NA70 645 aa13.37□□□□□ -0.27
VAMP4-202ENST00000367740 OR10G3Q8NGC4 313 aa13.37□□□□□ -0.27
VAMP4-202ENST00000367740 OR5L2Q8NGL0 311 aa13.37□□□□□ -0.27
VAMP4-202ENST00000367740 OR14A16Q8NHC5 309 aa13.37□□□□□ -0.27
VAMP4-202ENST00000367740 SLC2A12Q8TD20 617 aa13.37□□□□□ -0.27
VAMP4-202ENST00000367740 INTS12Q96CB8 462 aaKnown RBP13.37□□□□□ -0.27
VAMP4-202ENST00000367740 ZNF597Q96LX8 424 aa13.37□□□□□ -0.27
VAMP4-202ENST00000367740 DOHHQ9BU89 302 aa13.37□□□□□ -0.27
VAMP4-202ENST00000367740 UBQLN3Q9H347 655 aa13.37□□□□□ -0.27
VAMP4-202ENST00000367740 NHEJ1Q9H9Q4 299 aaPredicted RBP13.37□□□□□ -0.27
VAMP4-202ENST00000367740 PACSIN3Q9UKS6 424 aa13.37□□□□□ -0.27
VAMP4-202ENST00000367740 CNOT11Q9UKZ1 510 aaKnown RBP13.37□□□□□ -0.27
VAMP4-202ENST00000367740 URADA6NGE7 173 aa13.36□□□□□ -0.27
VAMP4-202ENST00000367740 TRIM3O75382 744 aaPredicted RBP13.36□□□□□ -0.27
VAMP4-202ENST00000367740 TRAPPC6AO75865 159 aa13.36□□□□□ -0.27
VAMP4-202ENST00000367740 RCBTB2O95199 551 aa13.36□□□□□ -0.27
VAMP4-202ENST00000367740 VAPBO95292 243 aa13.36□□□□□ -0.27
VAMP4-202ENST00000367740 ENO3P13929 434 aaPredicted RBP13.36□□□□□ -0.27
VAMP4-202ENST00000367740 CCND1P24385 295 aa13.36□□□□□ -0.27
VAMP4-202ENST00000367740 AHRP35869 848 aa13.36□□□□□ -0.27
VAMP4-202ENST00000367740 CDK9P50750 372 aaKnown RBP13.36□□□□□ -0.27
VAMP4-202ENST00000367740 DIO3P55073 304 aa13.36□□□□□ -0.27
VAMP4-202ENST00000367740 UBASH3AP57075 661 aa13.36□□□□□ -0.27
VAMP4-202ENST00000367740 RAB38P57729 211 aa13.36□□□□□ -0.27
VAMP4-202ENST00000367740 IQCB1Q15051 598 aa13.36□□□□□ -0.27
VAMP4-202ENST00000367740 SDCCAG8Q86SQ7 713 aaPredicted RBP13.36□□□□□ -0.27
VAMP4-202ENST00000367740 FAM13CQ8NE31 585 aa13.36□□□□□ -0.27
VAMP4-202ENST00000367740 ZPLD1Q8TCW7 415 aa13.36□□□□□ -0.27
VAMP4-202ENST00000367740 ANKRD9Q96BM1 317 aaPredicted RBP13.36□□□□□ -0.27
VAMP4-202ENST00000367740 TCF12Q99081 682 aa13.36□□□□□ -0.27
VAMP4-202ENST00000367740 ANGPTL4Q9BY76 406 aa13.36□□□□□ -0.27
VAMP4-202ENST00000367740 PSD3Q9NYI0 1048 aa13.36□□□□□ -0.27
VAMP4-202ENST00000367740 CNIH4Q9P003 139 aa13.36□□□□□ -0.27
VAMP4-202ENST00000367740 ADAMTS6Q9UKP5 1117 aa13.36□□□□□ -0.27
VAMP4-202ENST00000367740 PDE10AQ9Y233 779 aa13.36□□□□□ -0.27
VAMP4-202ENST00000367740 EXPH5Q8NEV8 1989 aa13.36□□□□□ -0.27
VAMP4-202ENST00000367740 MGAM2Q2M2H8 2515 aa13.36□□□□□ -0.27
VAMP4-202ENST00000367740 YLPM1P49750 1951 aaKnown RBP13.35□□□□□ -0.27
VAMP4-202ENST00000367740 TNFSF12-TNFSF13A0A0A6YY99 330 aa13.35□□□□□ -0.27
VAMP4-202ENST00000367740 TNFSF13O75888 250 aa13.35□□□□□ -0.27
VAMP4-202ENST00000367740 ACSL3O95573 720 aa13.35□□□□□ -0.27
VAMP4-202ENST00000367740 F7P08709 466 aaPredicted RBP13.35□□□□□ -0.27
VAMP4-202ENST00000367740 PCYT1AP49585 367 aa13.35□□□□□ -0.27
VAMP4-202ENST00000367740 BTN3A2P78410 334 aa13.35□□□□□ -0.27
VAMP4-202ENST00000367740 ETFDHQ16134 617 aa13.35□□□□□ -0.27
VAMP4-202ENST00000367740 TOR1AIP1Q5JTV8 583 aa13.35□□□□□ -0.27
VAMP4-202ENST00000367740 CENPUQ71F23 418 aa13.35□□□□□ -0.27
VAMP4-202ENST00000367740 ZNF550Q7Z398 422 aa13.35□□□□□ -0.27
VAMP4-202ENST00000367740 ADGRE4PQ86SQ3 457 aa13.35□□□□□ -0.27
VAMP4-202ENST00000367740 ZNF595Q8IYB9 648 aa13.35□□□□□ -0.27
VAMP4-202ENST00000367740 CPNE9Q8IYJ1 553 aa13.35□□□□□ -0.27
VAMP4-202ENST00000367740 TBC1D19Q8N5T2 526 aa13.35□□□□□ -0.27
VAMP4-202ENST00000367740 SLC35B2Q8TB61 432 aa13.35□□□□□ -0.27
VAMP4-202ENST00000367740 SLC22A8Q8TCC7 542 aa13.35□□□□□ -0.27
VAMP4-202ENST00000367740 PYCR2Q96C36 320 aa13.35□□□□□ -0.27
VAMP4-202ENST00000367740 MFSD3Q96ES6 412 aa13.35□□□□□ -0.27
VAMP4-202ENST00000367740 CCDC42Q96M95 316 aa13.35□□□□□ -0.27
VAMP4-202ENST00000367740 OR4K3Q96R72 315 aa13.35□□□□□ -0.27
VAMP4-202ENST00000367740 CSF3RQ99062 836 aa13.35□□□□□ -0.27
VAMP4-202ENST00000367740 TM9SF2Q99805 663 aa13.35□□□□□ -0.27
VAMP4-202ENST00000367740 TUBA1CQ9BQE3 449 aa13.35□□□□□ -0.27
VAMP4-202ENST00000367740 HAUS8Q9BT25 410 aa13.35□□□□□ -0.27
VAMP4-202ENST00000367740 LRTM1Q9HBL6 345 aa13.35□□□□□ -0.27
VAMP4-202ENST00000367740 KLHL42Q9P2K6 505 aa13.35□□□□□ -0.27
VAMP4-202ENST00000367740 VTI1BQ9UEU0 232 aa13.35□□□□□ -0.27
VAMP4-202ENST00000367740 IKBKGQ9Y6K9 419 aa13.35□□□□□ -0.27
VAMP4-202ENST00000367740 A0A0G2JN53 185 aa13.34□□□□□ -0.27
VAMP4-202ENST00000367740 SYNDIG1LA6NDD5 238 aa13.34□□□□□ -0.27
VAMP4-202ENST00000367740 C17orf105B2RV13 164 aa13.34□□□□□ -0.27
VAMP4-202ENST00000367740 E7EVH7 732 aa13.34□□□□□ -0.27
VAMP4-202ENST00000367740 MSTNO14793 375 aa13.34□□□□□ -0.27
VAMP4-202ENST00000367740 PFDN6O15212 129 aa13.34□□□□□ -0.27
VAMP4-202ENST00000367740 CYP4B1P13584 511 aa13.34□□□□□ -0.27
VAMP4-202ENST00000367740 OGNP20774 298 aaKnown RBP13.34□□□□□ -0.27
VAMP4-202ENST00000367740 THBS2P35442 1172 aa13.34□□□□□ -0.27
VAMP4-202ENST00000367740 FDFT1P37268 417 aa13.34□□□□□ -0.27
VAMP4-202ENST00000367740 CD79BP40259 229 aa13.34□□□□□ -0.27
VAMP4-202ENST00000367740 SESN2P58004 480 aaPredicted RBP13.34□□□□□ -0.27
VAMP4-202ENST00000367740 REEP5Q00765 189 aa13.34□□□□□ -0.27
VAMP4-202ENST00000367740 CTBP1Q13363 440 aa13.34□□□□□ -0.27
VAMP4-202ENST00000367740 EIPR1Q53HC9 387 aa13.34□□□□□ -0.27
VAMP4-202ENST00000367740 FNDC7Q5VTL7 733 aa13.34□□□□□ -0.27
VAMP4-202ENST00000367740 CES3Q6UWW8 571 aa13.34□□□□□ -0.27
VAMP4-202ENST00000367740 C22orf34Q6ZV56 151 aa13.34□□□□□ -0.27
VAMP4-202ENST00000367740 BTLAQ7Z6A9 289 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms