RNA–Protein interactions for RNA: ENST00000367569.3

SF3B5-201, Transcript of splicing factor 3b subunit 5, humanhuman

APPRIS P1 BASIC

Gene SF3B5, Length 693 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B5-201ENST00000367569 FGF17O60258 216 aa13.71□□□□□ -0.21
SF3B5-201ENST00000367569 SCELO95171 688 aa13.71□□□□□ -0.21
SF3B5-201ENST00000367569 DDAH2O95865 285 aa13.71□□□□□ -0.21
SF3B5-201ENST00000367569 IFNA16P05015 189 aa13.71□□□□□ -0.21
SF3B5-201ENST00000367569 IMPDH1P20839 514 aa13.71□□□□□ -0.21
SF3B5-201ENST00000367569 IL10P22301 178 aa13.71□□□□□ -0.21
SF3B5-201ENST00000367569 HMOX2P30519 316 aa13.71□□□□□ -0.21
SF3B5-201ENST00000367569 SOX11P35716 441 aa13.71□□□□□ -0.21
SF3B5-201ENST00000367569 CCT5P48643 541 aa13.71□□□□□ -0.21
SF3B5-201ENST00000367569 TNFRSF17Q02223 184 aa13.71□□□□□ -0.21
SF3B5-201ENST00000367569 SRSF11Q05519 484 aaKnown RBP13.71□□□□□ -0.21
SF3B5-201ENST00000367569 SLC18A2Q05940 514 aa13.71□□□□□ -0.21
SF3B5-201ENST00000367569 MFAP5Q13361 173 aa13.71□□□□□ -0.21
SF3B5-201ENST00000367569 RASA2Q15283 850 aa13.71□□□□□ -0.21
SF3B5-201ENST00000367569 METTL2BQ6P1Q9 378 aaKnown RBP13.71□□□□□ -0.21
SF3B5-201ENST00000367569 ISLR2Q6UXK2 745 aa13.71□□□□□ -0.21
SF3B5-201ENST00000367569 NUDT13Q86X67 352 aa13.71□□□□□ -0.21
SF3B5-201ENST00000367569 CRLF3Q8IUI8 442 aa13.71□□□□□ -0.21
SF3B5-201ENST00000367569 C10orf107Q8IVU9 208 aa13.71□□□□□ -0.21
SF3B5-201ENST00000367569 MMP21Q8N119 569 aa13.71□□□□□ -0.21
SF3B5-201ENST00000367569 RIBC1Q8N443 379 aaPredicted RBP13.71□□□□□ -0.21
SF3B5-201ENST00000367569 MREGQ8N565 214 aa13.71□□□□□ -0.21
SF3B5-201ENST00000367569 AGAP11Q8TF27 550 aa13.71□□□□□ -0.21
SF3B5-201ENST00000367569 THAP3Q8WTV1 239 aaPredicted RBP13.71□□□□□ -0.21
SF3B5-201ENST00000367569 TM9SF4Q92544 642 aa13.71□□□□□ -0.21
SF3B5-201ENST00000367569 ZNF382Q96SR6 550 aa13.71□□□□□ -0.21
SF3B5-201ENST00000367569 BARD1Q99728 777 aaKnown RBP13.71□□□□□ -0.21
SF3B5-201ENST00000367569 NPAS2Q99743 824 aa13.71□□□□□ -0.21
SF3B5-201ENST00000367569 CENPKQ9BS16 269 aa13.71□□□□□ -0.21
SF3B5-201ENST00000367569 EPS8L2Q9H6S3 715 aa13.71□□□□□ -0.21
SF3B5-201ENST00000367569 TNFRSF12AQ9NP84 129 aa13.71□□□□□ -0.21
SF3B5-201ENST00000367569 MID1IP1Q9NPA3 183 aa13.71□□□□□ -0.21
SF3B5-201ENST00000367569 TEX10Q9NXF1 929 aaPredicted RBP13.71□□□□□ -0.21
SF3B5-201ENST00000367569 GRID1Q9ULK0 1009 aa13.71□□□□□ -0.21
SF3B5-201ENST00000367569 MRPS33Q9Y291 106 aaKnown RBP13.71□□□□□ -0.21
SF3B5-201ENST00000367569 ATG4BQ9Y4P1 393 aa13.71□□□□□ -0.21
SF3B5-201ENST00000367569 PCDHGA10Q9Y5H3 936 aa13.71□□□□□ -0.21
SF3B5-201ENST00000367569 COPG1Q9Y678 874 aaKnown RBP13.71□□□□□ -0.21
SF3B5-201ENST00000367569 SVILO95425 2214 aa13.71□□□□□ -0.22
SF3B5-201ENST00000367569 A0A0A6YYD5 115 aa13.7□□□□□ -0.22
SF3B5-201ENST00000367569 ANKUB1A6NFN9 424 aa13.7□□□□□ -0.22
SF3B5-201ENST00000367569 WIPF3A6NGB9 483 aa13.7□□□□□ -0.22
SF3B5-201ENST00000367569 AIFM1O95831 613 aa13.7□□□□□ -0.22
SF3B5-201ENST00000367569 LDLRP01130 860 aa13.7□□□□□ -0.22
SF3B5-201ENST00000367569 KLK1P06870 262 aa13.7□□□□□ -0.22
SF3B5-201ENST00000367569 CPA3P15088 417 aa13.7□□□□□ -0.22
SF3B5-201ENST00000367569 PTX3P26022 381 aaPredicted RBP13.7□□□□□ -0.22
SF3B5-201ENST00000367569 PTGER1P34995 402 aa13.7□□□□□ -0.22
SF3B5-201ENST00000367569 NAGLUP54802 743 aa13.7□□□□□ -0.22
SF3B5-201ENST00000367569 ARG2P78540 354 aa13.7□□□□□ -0.22
SF3B5-201ENST00000367569 LCP2Q13094 533 aa13.7□□□□□ -0.22
SF3B5-201ENST00000367569 CCDC153Q494R4 210 aa13.7□□□□□ -0.22
SF3B5-201ENST00000367569 PLAG1Q6DJT9 500 aa13.7□□□□□ -0.22
SF3B5-201ENST00000367569 CYP20A1Q6UW02 462 aa13.7□□□□□ -0.22
SF3B5-201ENST00000367569 ZCCHC23Q6ZST2 131 aa13.7□□□□□ -0.22
SF3B5-201ENST00000367569 ZNF595Q8IYB9 648 aa13.7□□□□□ -0.22
SF3B5-201ENST00000367569 BEST3Q8N1M1 668 aa13.7□□□□□ -0.22
SF3B5-201ENST00000367569 ZNF321PQ8N8H1 164 aa13.7□□□□□ -0.22
SF3B5-201ENST00000367569 BANPQ8N9N5 519 aa13.7□□□□□ -0.22
SF3B5-201ENST00000367569 SRFBP1Q8NEF9 429 aaKnown RBP13.7□□□□□ -0.22
SF3B5-201ENST00000367569 ADAMTS18Q8TE60 1221 aa13.7□□□□□ -0.22
SF3B5-201ENST00000367569 ZIM3Q96PE6 472 aa13.7□□□□□ -0.22
SF3B5-201ENST00000367569 ROGDIQ9GZN7 287 aa13.7□□□□□ -0.22
SF3B5-201ENST00000367569 LYRM4Q9HD34 91 aa13.7□□□□□ -0.22
SF3B5-201ENST00000367569 ADGRE2Q9UHX3 823 aa13.7□□□□□ -0.22
SF3B5-201ENST00000367569 TSC22D4Q9Y3Q8 395 aa13.7□□□□□ -0.22
SF3B5-201ENST00000367569 MMACHCQ9Y4U1 282 aa13.7□□□□□ -0.22
SF3B5-201ENST00000367569 PTGDR2Q9Y5Y4 395 aa13.7□□□□□ -0.22
SF3B5-201ENST00000367569 DIDO1Q9BTC0 2240 aaKnown RBP13.7□□□□□ -0.22
SF3B5-201ENST00000367569 MYO9AB2RTY4 2548 aa13.69□□□□□ -0.22
SF3B5-201ENST00000367569 TRBV11-1A0A0K0K1C0 115 aa13.69□□□□□ -0.22
SF3B5-201ENST00000367569 PCDH17O14917 1159 aa13.69□□□□□ -0.22
SF3B5-201ENST00000367569 CLDN1O95832 211 aa13.69□□□□□ -0.22
SF3B5-201ENST00000367569 WDPCPO95876 746 aa13.69□□□□□ -0.22
SF3B5-201ENST00000367569 CYC1P08574 325 aa13.69□□□□□ -0.22
SF3B5-201ENST00000367569 NR2F6P10588 404 aa13.69□□□□□ -0.22
SF3B5-201ENST00000367569 COL8A1P27658 744 aa13.69□□□□□ -0.22
SF3B5-201ENST00000367569 SERPINB3P29508 390 aa13.69□□□□□ -0.22
SF3B5-201ENST00000367569 HSD17B7P56937 341 aa13.69□□□□□ -0.22
SF3B5-201ENST00000367569 HMGCS1Q01581 520 aa13.69□□□□□ -0.22
SF3B5-201ENST00000367569 STX4Q12846 297 aa13.69□□□□□ -0.22
SF3B5-201ENST00000367569 CUL3Q13618 768 aa13.69□□□□□ -0.22
SF3B5-201ENST00000367569 CFAP157Q5JU67 520 aa13.69□□□□□ -0.22
SF3B5-201ENST00000367569 CEP85LQ5SZL2 805 aa13.69□□□□□ -0.22
SF3B5-201ENST00000367569 CLEC6AQ6EIG7 209 aa13.69□□□□□ -0.22
SF3B5-201ENST00000367569 IGFL2Q6UWQ7 119 aa13.69□□□□□ -0.22
SF3B5-201ENST00000367569 C16orf47Q6ZP98 133 aaPredicted RBP13.69□□□□□ -0.22
SF3B5-201ENST00000367569 FRMD7Q6ZUT3 714 aa13.69□□□□□ -0.22
SF3B5-201ENST00000367569 COMMD6Q7Z4G1 85 aa13.69□□□□□ -0.22
SF3B5-201ENST00000367569 GPR180Q86V85 440 aa13.69□□□□□ -0.22
SF3B5-201ENST00000367569 C1orf52Q8N6N3 182 aaKnown RBP13.69□□□□□ -0.22
SF3B5-201ENST00000367569 NFAM1Q8NET5 270 aaPredicted RBP13.69□□□□□ -0.22
SF3B5-201ENST00000367569 DNAJB14Q8TBM8 379 aa13.69□□□□□ -0.22
SF3B5-201ENST00000367569 METTL6Q8TCB7 284 aa13.69□□□□□ -0.22
SF3B5-201ENST00000367569 TCP10LQ8TDR4 215 aa13.69□□□□□ -0.22
SF3B5-201ENST00000367569 NCLNQ969V3 563 aa13.69□□□□□ -0.22
SF3B5-201ENST00000367569 PKNOX2Q96KN3 472 aa13.69□□□□□ -0.22
SF3B5-201ENST00000367569 SERPINI1Q99574 410 aa13.69□□□□□ -0.22
SF3B5-201ENST00000367569 ACPTQ9BZG2 426 aa13.69□□□□□ -0.22
SF3B5-201ENST00000367569 LIN28AQ9H9Z2 209 aaKnown RBP13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms