RNA–Protein interactions for RNA: ENST00000366304.3

HMGB1P39-201, Transcript of high mobility group box 1 pseudogene 39, humanhuman

BASIC

Gene HMGB1P39, Length 880 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P39-201ENST00000366304 TMIGD3P0DMS9 266 aaPredicted RBP7.75□□□□□ -1.17
HMGB1P39-201ENST00000366304 ETS1P14921 441 aa7.75□□□□□ -1.17
HMGB1P39-201ENST00000366304 FPR1P21462 350 aa7.75□□□□□ -1.17
HMGB1P39-201ENST00000366304 CRYGSP22914 178 aa7.75□□□□□ -1.17
HMGB1P39-201ENST00000366304 CTNNA1P35221 906 aaKnown RBP7.75□□□□□ -1.17
HMGB1P39-201ENST00000366304 RNF4P78317 190 aa7.75□□□□□ -1.17
HMGB1P39-201ENST00000366304 ASPHQ12797 758 aa7.75□□□□□ -1.17
HMGB1P39-201ENST00000366304 NAE1Q13564 534 aa7.75□□□□□ -1.17
HMGB1P39-201ENST00000366304 P3H1Q32P28 736 aa7.75□□□□□ -1.17
HMGB1P39-201ENST00000366304 PIGGQ5H8A4 983 aa7.75□□□□□ -1.17
HMGB1P39-201ENST00000366304 SAMD5Q5TGI4 173 aa7.75□□□□□ -1.17
HMGB1P39-201ENST00000366304 FNDC7Q5VTL7 733 aa7.75□□□□□ -1.17
HMGB1P39-201ENST00000366304 BICRALQ6AI39 1079 aa7.75□□□□□ -1.17
HMGB1P39-201ENST00000366304 HSDL2Q6YN16 418 aa7.75□□□□□ -1.17
HMGB1P39-201ENST00000366304 PPP1R21Q6ZMI0 780 aa7.75□□□□□ -1.17
HMGB1P39-201ENST00000366304 C20orf204Q6ZNR8 217 aa7.75□□□□□ -1.17
HMGB1P39-201ENST00000366304 C17orf64Q86WR6 236 aa7.75□□□□□ -1.17
HMGB1P39-201ENST00000366304 RASGEF1CQ8N431 466 aa7.75□□□□□ -1.17
HMGB1P39-201ENST00000366304 GOLGA6L1Q8N7Z2 621 aa7.75□□□□□ -1.17
HMGB1P39-201ENST00000366304 ABHD11Q8NFV4 315 aa7.75□□□□□ -1.17
HMGB1P39-201ENST00000366304 OR10G3Q8NGC4 313 aa7.75□□□□□ -1.17
HMGB1P39-201ENST00000366304 SLC35B2Q8TB61 432 aa7.75□□□□□ -1.17
HMGB1P39-201ENST00000366304 PAQR8Q8TEZ7 354 aa7.75□□□□□ -1.17
HMGB1P39-201ENST00000366304 ANP32BQ92688 251 aaKnown RBP7.75□□□□□ -1.17
HMGB1P39-201ENST00000366304 ALKBH8Q96BT7 664 aaKnown RBP7.75□□□□□ -1.17
HMGB1P39-201ENST00000366304 PYCR2Q96C36 320 aa7.75□□□□□ -1.17
HMGB1P39-201ENST00000366304 MFSD3Q96ES6 412 aa7.75□□□□□ -1.17
HMGB1P39-201ENST00000366304 HSPBAP1Q96EW2 488 aa7.75□□□□□ -1.17
HMGB1P39-201ENST00000366304 MRFAP1L1Q96HT8 127 aa7.75□□□□□ -1.17
HMGB1P39-201ENST00000366304 SECISBP2Q96T21 854 aaKnown RBP7.75□□□□□ -1.17
HMGB1P39-201ENST00000366304 CSF3RQ99062 836 aa7.75□□□□□ -1.17
HMGB1P39-201ENST00000366304 CCDC77Q9BR77 488 aa7.75□□□□□ -1.17
HMGB1P39-201ENST00000366304 G6PC3Q9BUM1 346 aa7.75□□□□□ -1.17
HMGB1P39-201ENST00000366304 UGT2B28Q9BY64 529 aa7.75□□□□□ -1.17
HMGB1P39-201ENST00000366304 HOMER3Q9NSC5 361 aa7.75□□□□□ -1.17
HMGB1P39-201ENST00000366304 SAMD15Q9P1V8 674 aa7.75□□□□□ -1.17
HMGB1P39-201ENST00000366304 ANAPC5Q9UJX4 755 aa7.75□□□□□ -1.17
HMGB1P39-201ENST00000366304 GDF2Q9UK05 429 aaPredicted RBP7.75□□□□□ -1.17
HMGB1P39-201ENST00000366304 CNOT11Q9UKZ1 510 aaKnown RBP7.75□□□□□ -1.17
HMGB1P39-201ENST00000366304 CAMK2AQ9UQM7 478 aa7.75□□□□□ -1.17
HMGB1P39-201ENST00000366304 PDE10AQ9Y233 779 aa7.75□□□□□ -1.17
HMGB1P39-201ENST00000366304 DTX4Q9Y2E6 619 aa7.75□□□□□ -1.17
HMGB1P39-201ENST00000366304 EFR3BQ9Y2G0 817 aa7.75□□□□□ -1.17
HMGB1P39-201ENST00000366304 MMACHCQ9Y4U1 282 aa7.75□□□□□ -1.17
HMGB1P39-201ENST00000366304 CHCHD2Q9Y6H1 151 aaPredicted RBP7.75□□□□□ -1.17
HMGB1P39-201ENST00000366304 PKD1L1Q8TDX9 2849 aa7.75□□□□□ -1.17
HMGB1P39-201ENST00000366304 MED12Q93074 2177 aa7.74□□□□□ -1.17
HMGB1P39-201ENST00000366304 TNFSF12-TNFSF13A0A0A6YY99 330 aa7.74□□□□□ -1.17
HMGB1P39-201ENST00000366304 TRBC2A0A5B9 178 aa7.74□□□□□ -1.17
HMGB1P39-201ENST00000366304 SMTNL1A8MU46 457 aa7.74□□□□□ -1.17
HMGB1P39-201ENST00000366304 HRKO00198 91 aa7.74□□□□□ -1.17
HMGB1P39-201ENST00000366304 CASKO14936 926 aa7.74□□□□□ -1.17
HMGB1P39-201ENST00000366304 PSMD3O43242 534 aa7.74□□□□□ -1.17
HMGB1P39-201ENST00000366304 GPRIN2O60269 458 aa7.74□□□□□ -1.17
HMGB1P39-201ENST00000366304 TRIM3O75382 744 aaPredicted RBP7.74□□□□□ -1.17
HMGB1P39-201ENST00000366304 TNFSF13O75888 250 aa7.74□□□□□ -1.17
HMGB1P39-201ENST00000366304 ETHE1O95571 254 aa7.74□□□□□ -1.17
HMGB1P39-201ENST00000366304 PLAUP00749 431 aa7.74□□□□□ -1.17
HMGB1P39-201ENST00000366304 ESR1P03372 595 aa7.74□□□□□ -1.17
HMGB1P39-201ENST00000366304 FAM157CP0CG43 387 aa7.74□□□□□ -1.17
HMGB1P39-201ENST00000366304 MC3RP41968 323 aa7.74□□□□□ -1.17
HMGB1P39-201ENST00000366304 ATP5J2P56134 94 aa7.74□□□□□ -1.17
HMGB1P39-201ENST00000366304 SESN2P58004 480 aaPredicted RBP7.74□□□□□ -1.17
HMGB1P39-201ENST00000366304 TIAL1Q01085 375 aaKnown RBP eCLIP7.74□□□□□ -1.17
HMGB1P39-201ENST00000366304 BMPR2Q13873 1038 aa7.74□□□□□ -1.17
HMGB1P39-201ENST00000366304 PHKG1Q16816 387 aa7.74□□□□□ -1.17
HMGB1P39-201ENST00000366304 CHRFAM7AQ494W8 412 aa7.74□□□□□ -1.17
HMGB1P39-201ENST00000366304 EIPR1Q53HC9 387 aa7.74□□□□□ -1.17
HMGB1P39-201ENST00000366304 C11orf63Q6NUN7 778 aa7.74□□□□□ -1.17
HMGB1P39-201ENST00000366304 AGTRAPQ6RW13 159 aa7.74□□□□□ -1.17
HMGB1P39-201ENST00000366304 UBE2R2Q712K3 238 aaPredicted RBP7.74□□□□□ -1.17
HMGB1P39-201ENST00000366304 ZNF550Q7Z398 422 aa7.74□□□□□ -1.17
HMGB1P39-201ENST00000366304 KIAA1328Q86T90 577 aa7.74□□□□□ -1.17
HMGB1P39-201ENST00000366304 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP7.74□□□□□ -1.17
HMGB1P39-201ENST00000366304 MPP5Q8N3R9 675 aa7.74□□□□□ -1.17
HMGB1P39-201ENST00000366304 FAM47BQ8NA70 645 aa7.74□□□□□ -1.17
HMGB1P39-201ENST00000366304 EDARADDQ8WWZ3 215 aa7.74□□□□□ -1.17
HMGB1P39-201ENST00000366304 ATG4AQ8WYN0 398 aa7.74□□□□□ -1.17
HMGB1P39-201ENST00000366304 PEX13Q92968 403 aa7.74□□□□□ -1.17
HMGB1P39-201ENST00000366304 LRRC45Q96CN5 670 aa7.74□□□□□ -1.17
HMGB1P39-201ENST00000366304 HSH2DQ96JZ2 352 aa7.74□□□□□ -1.17
HMGB1P39-201ENST00000366304 JSRP1Q96MG2 331 aaPredicted RBP7.74□□□□□ -1.17
HMGB1P39-201ENST00000366304 DOCK7Q96N67 2140 aa7.74□□□□□ -1.17
HMGB1P39-201ENST00000366304 TUBA1CQ9BQE3 449 aa7.74□□□□□ -1.17
HMGB1P39-201ENST00000366304 PLA2G12AQ9BZM1 189 aa7.74□□□□□ -1.17
HMGB1P39-201ENST00000366304 OR8D2Q9GZM6 311 aa7.74□□□□□ -1.17
HMGB1P39-201ENST00000366304 UBQLN3Q9H347 655 aa7.74□□□□□ -1.17
HMGB1P39-201ENST00000366304 CALHM2Q9HA72 323 aa7.74□□□□□ -1.17
HMGB1P39-201ENST00000366304 ADAP2Q9NPF8 381 aa7.74□□□□□ -1.17
HMGB1P39-201ENST00000366304 PRTFDC1Q9NRG1 225 aa7.74□□□□□ -1.17
HMGB1P39-201ENST00000366304 PRDM4Q9UKN5 801 aa7.74□□□□□ -1.17
HMGB1P39-201ENST00000366304 ZNF148Q9UQR1 794 aa7.74□□□□□ -1.17
HMGB1P39-201ENST00000366304 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP7.74□□□□□ -1.17
HMGB1P39-201ENST00000366304 DSCAMO60469 2012 aa7.74□□□□□ -1.17
HMGB1P39-201ENST00000366304 A8MV72 311 aaPredicted RBP7.73□□□□□ -1.17
HMGB1P39-201ENST00000366304 PSMD12O00232 456 aaPredicted RBP7.73□□□□□ -1.17
HMGB1P39-201ENST00000366304 CYR61O00622 381 aa7.73□□□□□ -1.17
HMGB1P39-201ENST00000366304 TLX2O43763 284 aaPredicted RBP7.73□□□□□ -1.17
HMGB1P39-201ENST00000366304 NRDCO43847 1150 aa7.73□□□□□ -1.17
HMGB1P39-201ENST00000366304 ERN1O75460 977 aaKnown RBP7.73□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms