RNA–Protein interactions for RNA: ENST00000366159.8

TNFRSF1A-202, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF1A, Length 1,339 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-202ENST00000366159 PCDHGA11Q9Y5H2 935 aa12.7□□□□□ -0.38
TNFRSF1A-202ENST00000366159 CLCA3PQ9Y6N3 262 aa12.7□□□□□ -0.38
TNFRSF1A-202ENST00000366159 ADGRG4Q8IZF6 3080 aa12.7□□□□□ -0.38
TNFRSF1A-202ENST00000366159 KLRC4-KLRK1H3BQV0 150 aa12.69□□□□□ -0.38
TNFRSF1A-202ENST00000366159 SAP18O00422 153 aaKnown RBP12.69□□□□□ -0.38
TNFRSF1A-202ENST00000366159 OR7A17O14581 309 aa12.69□□□□□ -0.38
TNFRSF1A-202ENST00000366159 PEX1O43933 1283 aa12.69□□□□□ -0.38
TNFRSF1A-202ENST00000366159 FGF17O60258 216 aa12.69□□□□□ -0.38
TNFRSF1A-202ENST00000366159 ZNF354AO60765 605 aaPredicted RBP12.69□□□□□ -0.38
TNFRSF1A-202ENST00000366159 SH3BGRLO75368 114 aa12.69□□□□□ -0.38
TNFRSF1A-202ENST00000366159 SIX3O95343 332 aaPredicted RBP12.69□□□□□ -0.38
TNFRSF1A-202ENST00000366159 ETHE1O95571 254 aa12.69□□□□□ -0.38
TNFRSF1A-202ENST00000366159 IFNA16P05015 189 aa12.69□□□□□ -0.38
TNFRSF1A-202ENST00000366159 GFAPP14136 432 aa12.69□□□□□ -0.38
TNFRSF1A-202ENST00000366159 ZNF24P17028 368 aa12.69□□□□□ -0.38
TNFRSF1A-202ENST00000366159 AGAP20933 346 aa12.69□□□□□ -0.38
TNFRSF1A-202ENST00000366159 CPN2P22792 545 aa12.69□□□□□ -0.38
TNFRSF1A-202ENST00000366159 BSGP35613 385 aa12.69□□□□□ -0.38
TNFRSF1A-202ENST00000366159 SSR2P43308 183 aa12.69□□□□□ -0.38
TNFRSF1A-202ENST00000366159 MEOX1P50221 254 aa12.69□□□□□ -0.38
TNFRSF1A-202ENST00000366159 HK2P52789 917 aa12.69□□□□□ -0.38
TNFRSF1A-202ENST00000366159 RNF4P78317 190 aa12.69□□□□□ -0.38
TNFRSF1A-202ENST00000366159 HSF1Q00613 529 aa12.69□□□□□ -0.38
TNFRSF1A-202ENST00000366159 STX4Q12846 297 aa12.69□□□□□ -0.38
TNFRSF1A-202ENST00000366159 SLAMF1Q13291 335 aa12.69□□□□□ -0.38
TNFRSF1A-202ENST00000366159 CUL3Q13618 768 aa12.69□□□□□ -0.38
TNFRSF1A-202ENST00000366159 GTF2H2Q13888 395 aa12.69□□□□□ -0.38
TNFRSF1A-202ENST00000366159 GLE1Q53GS7 698 aaKnown RBP12.69□□□□□ -0.38
TNFRSF1A-202ENST00000366159 GTF2H2CQ6P1K8 395 aa12.69□□□□□ -0.38
TNFRSF1A-202ENST00000366159 RPTNQ6XPR3 784 aa12.69□□□□□ -0.38
TNFRSF1A-202ENST00000366159 HSDL2Q6YN16 418 aa12.69□□□□□ -0.38
TNFRSF1A-202ENST00000366159 DGAT2L6Q6ZPD8 337 aa12.69□□□□□ -0.38
TNFRSF1A-202ENST00000366159 MRGPRGQ86SM5 289 aa12.69□□□□□ -0.38
TNFRSF1A-202ENST00000366159 GPALPP1Q8IXQ4 340 aa12.69□□□□□ -0.38
TNFRSF1A-202ENST00000366159 CYP4Z2PQ8N1L4 340 aa12.69□□□□□ -0.38
TNFRSF1A-202ENST00000366159 GHDCQ8N2G8 530 aa12.69□□□□□ -0.38
TNFRSF1A-202ENST00000366159 TMEM151AQ8N4L1 468 aa12.69□□□□□ -0.38
TNFRSF1A-202ENST00000366159 TMEM156Q8N614 296 aa12.69□□□□□ -0.38
TNFRSF1A-202ENST00000366159 C7orf57Q8NEG2 295 aa12.69□□□□□ -0.38
TNFRSF1A-202ENST00000366159 RASL10BQ96S79 203 aa12.69□□□□□ -0.38
TNFRSF1A-202ENST00000366159 MTERF1Q99551 399 aaKnown RBP12.69□□□□□ -0.38
TNFRSF1A-202ENST00000366159 CCDC77Q9BR77 488 aa12.69□□□□□ -0.38
TNFRSF1A-202ENST00000366159 IPPKQ9H8X2 491 aa12.69□□□□□ -0.38
TNFRSF1A-202ENST00000366159 PLSCR2Q9NRY7 297 aa12.69□□□□□ -0.38
TNFRSF1A-202ENST00000366159 MS4A12Q9NXJ0 267 aa12.69□□□□□ -0.38
TNFRSF1A-202ENST00000366159 SUCOQ9UBS9 1254 aaKnown RBP12.69□□□□□ -0.38
TNFRSF1A-202ENST00000366159 MTRF1LQ9UGC7 380 aaKnown RBP12.69□□□□□ -0.38
TNFRSF1A-202ENST00000366159 MEMO1Q9Y316 297 aa12.69□□□□□ -0.38
TNFRSF1A-202ENST00000366159 ATG4BQ9Y4P1 393 aa12.69□□□□□ -0.38
TNFRSF1A-202ENST00000366159 ASB4Q9Y574 426 aa12.69□□□□□ -0.38
TNFRSF1A-202ENST00000366159 TNPO3Q9Y5L0 923 aaKnown RBP12.69□□□□□ -0.38
TNFRSF1A-202ENST00000366159 GTF3C1Q12789 2109 aa12.68□□□□□ -0.38
TNFRSF1A-202ENST00000366159 TACC2O95359 2948 aa12.68□□□□□ -0.38
TNFRSF1A-202ENST00000366159 ABCA12Q86UK0 2595 aa12.68□□□□□ -0.38
TNFRSF1A-202ENST00000366159 A0A0A6YYD5 115 aa12.68□□□□□ -0.38
TNFRSF1A-202ENST00000366159 C17orf105B2RV13 164 aa12.68□□□□□ -0.38
TNFRSF1A-202ENST00000366159 FOXE1O00358 373 aaPredicted RBP12.68□□□□□ -0.38
TNFRSF1A-202ENST00000366159 ADAM10O14672 748 aa12.68□□□□□ -0.38
TNFRSF1A-202ENST00000366159 ZNHIT1O43257 154 aa12.68□□□□□ -0.38
TNFRSF1A-202ENST00000366159 PROM1O43490 865 aa12.68□□□□□ -0.38
TNFRSF1A-202ENST00000366159 OR6B1O95007 311 aa12.68□□□□□ -0.38
TNFRSF1A-202ENST00000366159 ACSL3O95573 720 aa12.68□□□□□ -0.38
TNFRSF1A-202ENST00000366159 IGKV3-11P04433 115 aa12.68□□□□□ -0.38
TNFRSF1A-202ENST00000366159 PTX3P26022 381 aaPredicted RBP12.68□□□□□ -0.38
TNFRSF1A-202ENST00000366159 GRNP28799 593 aaKnown RBP12.68□□□□□ -0.38
TNFRSF1A-202ENST00000366159 PTGER1P34995 402 aa12.68□□□□□ -0.38
TNFRSF1A-202ENST00000366159 STT3AP46977 705 aa12.68□□□□□ -0.38
TNFRSF1A-202ENST00000366159 HNRNPH2P55795 449 aaKnown RBP12.68□□□□□ -0.38
TNFRSF1A-202ENST00000366159 RPS13P62277 151 aaKnown RBP12.68□□□□□ -0.38
TNFRSF1A-202ENST00000366159 ID2Q02363 134 aa12.68□□□□□ -0.38
TNFRSF1A-202ENST00000366159 BIKQ13323 160 aa12.68□□□□□ -0.38
TNFRSF1A-202ENST00000366159 UAP1Q16222 522 aaPredicted RBP12.68□□□□□ -0.38
TNFRSF1A-202ENST00000366159 CMPK2Q5EBM0 449 aa12.68□□□□□ -0.38
TNFRSF1A-202ENST00000366159 C18orf63Q68DL7 685 aa12.68□□□□□ -0.38
TNFRSF1A-202ENST00000366159 KLC3Q6P597 504 aa12.68□□□□□ -0.38
TNFRSF1A-202ENST00000366159 GPR180Q86V85 440 aa12.68□□□□□ -0.38
TNFRSF1A-202ENST00000366159 DOLPP1Q86YN1 238 aa12.68□□□□□ -0.38
TNFRSF1A-202ENST00000366159 LURAP1LQ8IV03 231 aa12.68□□□□□ -0.38
TNFRSF1A-202ENST00000366159 SLC2A12Q8TD20 617 aa12.68□□□□□ -0.38
TNFRSF1A-202ENST00000366159 DCAKDQ8WVC6 231 aa12.68□□□□□ -0.38
TNFRSF1A-202ENST00000366159 TANKQ92844 425 aa12.68□□□□□ -0.38
TNFRSF1A-202ENST00000366159 MAGED4Q96JG8 741 aa12.68□□□□□ -0.38
TNFRSF1A-202ENST00000366159 PAFAH2Q99487 392 aa12.68□□□□□ -0.38
TNFRSF1A-202ENST00000366159 FMO2Q99518 471 aa12.68□□□□□ -0.38
TNFRSF1A-202ENST00000366159 NTMT1Q9BV86 223 aa12.68□□□□□ -0.38
TNFRSF1A-202ENST00000366159 VPS11Q9H270 941 aa12.68□□□□□ -0.38
TNFRSF1A-202ENST00000366159 DDX31Q9H8H2 851 aaKnown RBP12.68□□□□□ -0.38
TNFRSF1A-202ENST00000366159 ACTR8Q9H981 624 aa12.68□□□□□ -0.38
TNFRSF1A-202ENST00000366159 ZNF180Q9UJW8 692 aa12.68□□□□□ -0.38
TNFRSF1A-202ENST00000366159 RNF11Q9Y3C5 154 aa12.68□□□□□ -0.38
TNFRSF1A-202ENST00000366159 SPACA6W5XKT8 324 aa12.68□□□□□ -0.38
TNFRSF1A-202ENST00000366159 PDZD2O15018 2839 aa12.68□□□□□ -0.38
TNFRSF1A-202ENST00000366159 MYO9AB2RTY4 2548 aa12.68□□□□□ -0.38
TNFRSF1A-202ENST00000366159 PINLYPA6NC86 204 aa12.67□□□□□ -0.38
TNFRSF1A-202ENST00000366159 PRSS44E7EML9 344 aa12.67□□□□□ -0.38
TNFRSF1A-202ENST00000366159 STX16-NPEPL1H3BU86 382 aa12.67□□□□□ -0.38
TNFRSF1A-202ENST00000366159 WWP2O00308 870 aa12.67□□□□□ -0.38
TNFRSF1A-202ENST00000366159 STX16O14662 325 aa12.67□□□□□ -0.38
TNFRSF1A-202ENST00000366159 TMPRSS11DO60235 418 aa12.67□□□□□ -0.38
TNFRSF1A-202ENST00000366159 EEDO75530 441 aaKnown RBP12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms