RNA–Protein interactions for RNA: ENST00000365375.1

RNU6-728P-201, Transcript of RNA, U6 small nuclear 728, pseudogene, humanhuman

BASIC

Gene RNU6-728P, Length 104 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-728P-201ENST00000365375 PRAMEF12O95522 483 aa0.67□□□□□ -2.3
RNU6-728P-201ENST00000365375 FCGR3AP08637 254 aa0.67□□□□□ -2.3
RNU6-728P-201ENST00000365375 SBK2P0C263 348 aa0.67□□□□□ -2.3
RNU6-728P-201ENST00000365375 EEF2P13639 858 aaKnown RBP0.67□□□□□ -2.3
RNU6-728P-201ENST00000365375 MYL6BP14649 208 aa0.67□□□□□ -2.3
RNU6-728P-201ENST00000365375 TCF4P15884 667 aa0.67□□□□□ -2.3
RNU6-728P-201ENST00000365375 UGT1A6P19224 532 aa0.67□□□□□ -2.3
RNU6-728P-201ENST00000365375 SSTR1P30872 391 aa0.67□□□□□ -2.3
RNU6-728P-201ENST00000365375 IL2RGP31785 369 aa0.67□□□□□ -2.3
RNU6-728P-201ENST00000365375 ID1P41134 155 aa0.67□□□□□ -2.3
RNU6-728P-201ENST00000365375 EIF2DP41214 584 aaKnown RBP0.67□□□□□ -2.3
RNU6-728P-201ENST00000365375 CDX1P47902 265 aaPredicted RBP0.67□□□□□ -2.3
RNU6-728P-201ENST00000365375 TRPC1P48995 793 aa0.67□□□□□ -2.3
RNU6-728P-201ENST00000365375 MFAP3P55082 362 aa0.67□□□□□ -2.3
RNU6-728P-201ENST00000365375 CHAF1BQ13112 559 aa0.67□□□□□ -2.3
RNU6-728P-201ENST00000365375 HERPUD1Q15011 391 aa0.67□□□□□ -2.3
RNU6-728P-201ENST00000365375 PPA1Q15181 289 aa0.67□□□□□ -2.3
RNU6-728P-201ENST00000365375 QRICH1Q2TAL8 776 aa0.67□□□□□ -2.3
RNU6-728P-201ENST00000365375 C6orf136Q5SQH8 315 aa0.67□□□□□ -2.3
RNU6-728P-201ENST00000365375 DDX59Q5T1V6 619 aaKnown RBP eCLIP0.67□□□□□ -2.3
RNU6-728P-201ENST00000365375 KRT39Q6A163 491 aa0.67□□□□□ -2.3
RNU6-728P-201ENST00000365375 FAAH2Q6GMR7 532 aa0.67□□□□□ -2.3
RNU6-728P-201ENST00000365375 ZNF770Q6IQ21 691 aaPredicted RBP0.67□□□□□ -2.3
RNU6-728P-201ENST00000365375 KLHL10Q6JEL2 608 aa0.67□□□□□ -2.3
RNU6-728P-201ENST00000365375 FAM180BQ6P0A1 224 aa0.67□□□□□ -2.3
RNU6-728P-201ENST00000365375 SLC27A4Q6P1M0 643 aa0.67□□□□□ -2.3
RNU6-728P-201ENST00000365375 BTNL8Q6UX41 500 aa0.67□□□□□ -2.3
RNU6-728P-201ENST00000365375 C17orf107Q6ZR85 190 aa0.67□□□□□ -2.3
RNU6-728P-201ENST00000365375 NRARPQ7Z6K4 114 aa0.67□□□□□ -2.3
RNU6-728P-201ENST00000365375 ZNF397Q8NF99 534 aaPredicted RBP0.67□□□□□ -2.3
RNU6-728P-201ENST00000365375 FBXO30Q8TB52 745 aa0.67□□□□□ -2.3
RNU6-728P-201ENST00000365375 OR5M11Q96RB7 305 aa0.67□□□□□ -2.3
RNU6-728P-201ENST00000365375 CCM2Q9BSQ5 444 aa0.67□□□□□ -2.3
RNU6-728P-201ENST00000365375 C19orf24Q9BVV8 132 aa0.67□□□□□ -2.3
RNU6-728P-201ENST00000365375 DPEP2Q9H4A9 486 aa0.67□□□□□ -2.3
RNU6-728P-201ENST00000365375 ADD3Q9UEY8 706 aaKnown RBP0.67□□□□□ -2.3
RNU6-728P-201ENST00000365375 APOBEC3BQ9UH17 382 aaKnown RBP0.67□□□□□ -2.3
RNU6-728P-201ENST00000365375 PPIEQ9UNP9 301 aaKnown RBP0.67□□□□□ -2.3
RNU6-728P-201ENST00000365375 SLIT3O75094 1523 aa0.67□□□□□ -2.3
RNU6-728P-201ENST00000365375 hCG_1809904A0A1W2PP81 198 aa0.66□□□□□ -2.3
RNU6-728P-201ENST00000365375 A0A1W2PPE2 198 aa0.66□□□□□ -2.3
RNU6-728P-201ENST00000365375 A0A1W2PR64 198 aa0.66□□□□□ -2.3
RNU6-728P-201ENST00000365375 EFCAB7A8K855 629 aa0.66□□□□□ -2.3
RNU6-728P-201ENST00000365375 ZBED4O75132 1171 aa0.66□□□□□ -2.3
RNU6-728P-201ENST00000365375 IGKV1-17P01599 117 aa0.66□□□□□ -2.3
RNU6-728P-201ENST00000365375 IGHV3-23P01764 117 aa0.66□□□□□ -2.3
RNU6-728P-201ENST00000365375 IGHV3-9P01782 118 aa0.66□□□□□ -2.3
RNU6-728P-201ENST00000365375 ABCB1P08183 1280 aaPredicted RBP0.66□□□□□ -2.3
RNU6-728P-201ENST00000365375 KRT3P12035 628 aa0.66□□□□□ -2.3
RNU6-728P-201ENST00000365375 ZNF823P16415 610 aa0.66□□□□□ -2.3
RNU6-728P-201ENST00000365375 PORP16435 677 aaPredicted RBP0.66□□□□□ -2.3
RNU6-728P-201ENST00000365375 CAPN3P20807 821 aa0.66□□□□□ -2.3
RNU6-728P-201ENST00000365375 ZP3P21754 424 aa0.66□□□□□ -2.3
RNU6-728P-201ENST00000365375 ACAT1P24752 427 aaKnown RBP0.66□□□□□ -2.3
RNU6-728P-201ENST00000365375 PPP2R1AP30153 589 aa0.66□□□□□ -2.3
RNU6-728P-201ENST00000365375 FHITP49789 147 aa0.66□□□□□ -2.3
RNU6-728P-201ENST00000365375 RGS7P49802 495 aa0.66□□□□□ -2.3
RNU6-728P-201ENST00000365375 NT5C2P49902 561 aa0.66□□□□□ -2.3
RNU6-728P-201ENST00000365375 GMPSP49915 693 aaPredicted RBP0.66□□□□□ -2.3
RNU6-728P-201ENST00000365375 LIG4P49917 911 aa0.66□□□□□ -2.3
RNU6-728P-201ENST00000365375 DIO3P55073 304 aa0.66□□□□□ -2.3
RNU6-728P-201ENST00000365375 GEMIN4P57678 1058 aaKnown RBP0.66□□□□□ -2.3
RNU6-728P-201ENST00000365375 CD47Q08722 323 aa0.66□□□□□ -2.3
RNU6-728P-201ENST00000365375 STK4Q13043 487 aa0.66□□□□□ -2.3
RNU6-728P-201ENST00000365375 GPR50Q13585 617 aa0.66□□□□□ -2.3
RNU6-728P-201ENST00000365375 SLC17A1Q14916 467 aa0.66□□□□□ -2.3
RNU6-728P-201ENST00000365375 SF3A2Q15428 464 aaKnown RBP0.66□□□□□ -2.3
RNU6-728P-201ENST00000365375 MPPED2Q15777 294 aa0.66□□□□□ -2.3
RNU6-728P-201ENST00000365375 MICAQ29983 383 aa0.66□□□□□ -2.3
RNU6-728P-201ENST00000365375 LETM2Q2VYF4 491 aa0.66□□□□□ -2.3
RNU6-728P-201ENST00000365375 CNPY1Q3B7I2 92 aa0.66□□□□□ -2.3
RNU6-728P-201ENST00000365375 FAM174BQ3ZCQ3 159 aa0.66□□□□□ -2.3
RNU6-728P-201ENST00000365375 SBK1Q52WX2 424 aa0.66□□□□□ -2.3
RNU6-728P-201ENST00000365375 LBHQ53QV2 105 aaPredicted RBP0.66□□□□□ -2.3
RNU6-728P-201ENST00000365375 SPATA46Q5T0L3 261 aa0.66□□□□□ -2.3
RNU6-728P-201ENST00000365375 ZNF658Q5TYW1 1059 aaPredicted RBP0.66□□□□□ -2.3
RNU6-728P-201ENST00000365375 FAM219BQ5XKK7 198 aa0.66□□□□□ -2.3
RNU6-728P-201ENST00000365375 FAM205BPQ63HN1 556 aa0.66□□□□□ -2.3
RNU6-728P-201ENST00000365375 SLC22A10Q63ZE4 541 aa0.66□□□□□ -2.3
RNU6-728P-201ENST00000365375 RFPL4BQ6ZWI9 263 aa0.66□□□□□ -2.3
RNU6-728P-201ENST00000365375 KRT77Q7Z794 578 aa0.66□□□□□ -2.3
RNU6-728P-201ENST00000365375 CACUL1Q86Y37 369 aa0.66□□□□□ -2.3
RNU6-728P-201ENST00000365375 LAX1Q8IWV1 398 aa0.66□□□□□ -2.3
RNU6-728P-201ENST00000365375 ZNF786Q8N393 782 aa0.66□□□□□ -2.3
RNU6-728P-201ENST00000365375 FBXW8Q8N3Y1 598 aa0.66□□□□□ -2.3
RNU6-728P-201ENST00000365375 ARL14Q8N4G2 192 aa0.66□□□□□ -2.3
RNU6-728P-201ENST00000365375 GPR148Q8TDV2 347 aa0.66□□□□□ -2.3
RNU6-728P-201ENST00000365375 SLC26A7Q8TE54 656 aa0.66□□□□□ -2.3
RNU6-728P-201ENST00000365375 CRYGNQ8WXF5 182 aa0.66□□□□□ -2.3
RNU6-728P-201ENST00000365375 SNRNP40Q96DI7 357 aaKnown RBP0.66□□□□□ -2.3
RNU6-728P-201ENST00000365375 GUCD1Q96NT3 240 aa0.66□□□□□ -2.3
RNU6-728P-201ENST00000365375 TREX2Q9BQ50 279 aaPredicted RBP0.66□□□□□ -2.3
RNU6-728P-201ENST00000365375 ST6GALNAC5Q9BVH7 336 aa0.66□□□□□ -2.3
RNU6-728P-201ENST00000365375 KLHL4Q9C0H6 718 aa0.66□□□□□ -2.3
RNU6-728P-201ENST00000365375 SNX25Q9H3E2 840 aa0.66□□□□□ -2.3
RNU6-728P-201ENST00000365375 MED17Q9NVC6 651 aa0.66□□□□□ -2.3
RNU6-728P-201ENST00000365375 HAUS2Q9NVX0 235 aa0.66□□□□□ -2.3
RNU6-728P-201ENST00000365375 SPG21Q9NZD8 308 aa0.66□□□□□ -2.3
RNU6-728P-201ENST00000365375 TBC1D29Q9UFV1 150 aa0.66□□□□□ -2.3
RNU6-728P-201ENST00000365375 CCPG1Q9ULG6 757 aa0.66□□□□□ -2.3
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms